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General Information
Manuscript title Effect of a single-gene knockout on the metabolic regulation in Escherichia coli for D-lactate production under microaerobic condition.
PubMed ID 15781419
Journal Metabolic Engineering
Year 2005
Authors Jiangfeng Zhu, Kazuyuki Shimizu
Affiliations Department of Biochemical Engineering & Science, Kyushu Institute of Technology, Iizuka, Fukuoka 820-8502, Japan.
Keywords Escherichia coli, Enzyme activity, Metabolite concentration, Metabolic flux analysis, Lactate production, Pyruvate metabolism
Full text article Zhu_2005.pdf
Project name not specified


Experiment Description
Organism Escherichia coli
Strain BW25113, pflA, pta, ppc, adhE and pykF mutants
Data type enzyme/protein concentrations
Data units mmol/min mg protein
Execution date not specified


Experimental Details
Temperature (°C) 37
pH 7.0
Carbon source glucose
Culture mode batch
Process condition aerobic
Dilution rate (h⁻¹)
Working volume (L) 1.0
Biomass concentration (g/L) Cell dry weight was determined by measuring the optical density at 600 nm. See worksheet.
Medium composition

not specified

General protocol information Measurement method: colorimetric assays

Methods description - Notes

The culture broth with a volume corresponding to about 100 mg (dry weight) of cells was centrifuged (4 °C, 10 min at 10,000×g) and washed twice with 20 mM Tris-HCl buffer (pH at 7.0). Cells were resuspended in Tris (100 mM) -HCl buffer (pH at 7.0) containing KCl (20 mM), MnS ...

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Submission and curation

Entered by: Administrator KiMoSysFirst name: Administrator
Affiliation: INESC-ID/IST
Homepage: http://kdbio.inesc-id.pt/kimosys
Interests: mathematical modeling, accessible data, use of data

Created: 2018-07-20 13:04:40 UTC

Updated: 2020-09-01 20:52:16 UTC

Version: 4

Status: (reviewed) 2018-07-20 13:15:12 UTC

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Downloads: 75




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