Detail View - Data AccessID 102
General Information
Manuscript title | Effect of a single-gene knockout on the metabolic regulation in Escherichia coli for D-lactate production under microaerobic condition. |
PubMed ID | 15781419 |
Journal | Metabolic Engineering |
Year | 2005 |
Authors | Jiangfeng Zhu, Kazuyuki Shimizu |
Affiliations | Department of Biochemical Engineering & Science, Kyushu Institute of Technology, Iizuka, Fukuoka 820-8502, Japan. |
Keywords | Escherichia coli, Enzyme activity, Metabolite concentration, Metabolic flux analysis, Lactate production, Pyruvate metabolism |
Full text article | Zhu_2005.pdf |
Project name | not specified |
Experiment Description
Organism | Escherichia coli |
Strain | BW25113, pflA, pta, ppc, adhE and pykF mutants |
Data type | enzyme/protein concentrations |
Data units | mmol/min mg protein |
Execution date | not specified |
Experimental Details
Temperature (°C) | 37 |
pH | 7.0 |
Carbon source | glucose |
Culture mode | batch |
Process condition | aerobic |
Dilution rate (h⁻¹) | — |
Working volume (L) | 1.0 |
Biomass concentration (g/L) | Cell dry weight was determined by measuring the optical density at 600 nm. See worksheet. |
Medium composition | not specified |
General protocol information |
Measurement method:
colorimetric assays |
Methods description - Notes | The culture broth with a volume corresponding to about 100 mg (dry weight) of cells was centrifuged (4 °C, 10 min at 10,000×g) and washed twice with 20 mM Tris-HCl buffer (pH at 7.0). Cells were resuspended in Tris (100 mM) -HCl buffer (pH at 7.0) containing KCl (20 mM), MnS ... Read more |
Data file |
KIMODATAID102_v4.xlsx
|
Alternative format(s) |
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Administrator KiMoSysFirst name: Administrator
Affiliation: INESC-ID/IST
Homepage: http://kdbio.inesc-id.pt/kimosys
Interests: mathematical modeling, accessible data, use of data
Created: 2018-07-20 13:04:40 UTC
Updated: 2020-09-01 20:52:16 UTC
Version: 4
Status: (reviewed) 2018-07-20 13:15:12 UTC
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