Detail View - Data AccessID 124
General Information
Manuscript title | Large-scale 13C-flux analysis reveals mechanistic principles of metabolic network robustness to null mutations in yeast. |
PubMed ID | 15960801 |
Journal | BMC Genome Biology |
Year | 2005 |
Authors | Lars M Blank, Lars Kuepfer and Uwe Sauer |
Affiliations | Institute of Biotechnology, ETH Zürich, 8093 Zürich, Switzerland |
Keywords | Pentose Phosphate Pathway, Flux Analysis, Glucose Uptake Rate, Oxidative Pentose Phosphate Pathway |
Full text article | Blank_2005.pdf |
Project name | not specified |
Experiment Description
Organism | Saccharomyces cerevisiae |
Strain | CEN.PK113-7D and 38 mutants |
Data type | flux measurements |
Data units | mmol/gh |
Execution date | not specified |
Experimental Details
Temperature (°C) | 30 |
pH | 5 |
Carbon source | glucose |
Culture mode | batch |
Process condition | aerobic |
Dilution rate (h⁻¹) | — |
Working volume (L) | 0.0012 |
Biomass concentration (g/L) | see worksheet |
Medium composition | not specified |
General protocol information |
Flux analysis method:
13C constrained MFA Platform: GC-MS |
Methods description - Notes | Glucose, acetate, ethanol and glycerol concentrations in the supernatant were determined with commercial enzymatic kits (Scil Diagnostics, Germany). Organic acids were quantified by high-pressure liquid chromatography (HPLC) using a Supelcogel C8 (4.6 by 250 mm) ion-exclusio ... Read more |
Data file |
KIMODATAID124_v2.xlsx
|
Alternative format(s) |
no file uploaded |
Export metadata |
RDF:
metadataDataEntryID124.rdf
XML: metadataDataEntryID124.xml Plain text: metadataDataEntryID124.txt |
Related Data: AccessID 61 | AccessID 62 | AccessID 69 | AccessID 70 | AccessID 93 | AccessID 97 | AccessID 98 | AccessID 99 | AccessID 100 | AccessID 111 | AccessID 115 | AccessID 117 | AccessID 120 | AccessID 121 | AccessID 122 | AccessID 123 | AccessID 128
Entered by:
Administrator KiMoSysFirst name: Administrator
Affiliation: INESC-ID/IST
Homepage: http://kdbio.inesc-id.pt/kimosys
Interests: mathematical modeling, accessible data, use of data
Created: 2018-09-25 13:20:17 UTC
Updated: 2020-04-24 16:10:37 UTC
Version: 2
Status: (reviewed) 2018-09-25 13:23:27 UTC
Views: 260
Downloads: 59
Associated Models
Here we can find relevant models associated with Data EntryID 124:
Model EntryID |
Model name | Category | Model Type | Data used for | Access |
---|
Associate models to data
- Several models can be associated.