Detail View - Model AccessID 16
General Information
Manuscript title | Modeling and simulation of the main metabolism in Escherichia coli and its several single-gene knockout mutants with experimental verification. |
PubMed ID | 21092096 |
Journal | Microbial Cell Factories |
Year | 2010 |
Authors | Tuty AA Kadir, Ahmad A Mannan, Andrzej M Kierzek, Johnjoe McFadden and Kazuyuki Shimizu |
Affiliations | Department of Bioscience and Bioinformatics, Kyushu Institute of Technology, Iizuka, Fukuoka 820-8502, Japan |
Keywords | Escherichia coli, single-gene knockouts, main central metabolism and TCA |
Full text article |
Kadir_2010.pdf |
Project name | not specified |
Data used for | Model validation |
Model Information
Model name | glycolysis Escherichia coli model |
Organism | Escherichia coli |
Associated Data EntryID |
Escherichia coli (Data EntryID:38) Escherichia coli (Data EntryID:105) Escherichia coli (Data EntryID:106) Escherichia coli (Data EntryID:107) |
Model type | ordinary differential equations |
Category | Metabolism |
Number of reactions | 30 |
Number of species | 23 + 9 co-metabolites |
Number of regulators | 15 |
Number of parameters | 173 |
Number of compartments | 1 |
Dilution rate (h-1) | — |
Model file(s) and history |
LATEST KIMOMODELID16.zip
(2018-07-21 20:34:09 UTC
by Administrator KiMoSysFirst name: Administrator Affiliation: INESC-ID/IST Homepage: http://kdbio.inesc-id.pt/kimosys Interests: mathematical modeling, accessible data, use of data ) |
Notes |
not specified
|
Software | http://www.matlab.com (MATLAB) |
BioModels or JWS Online ID | — |
Export metadata |
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metadataModelEntryID16.rdf
XML: metadataModelEntryID16.xml Plain text: metadataModelEntryID16.txt |
Related Model(s): AccessID 13 | AccessID 25 | AccessID 36 | AccessID 38 | AccessID 40 | AccessID 42 | AccessID 43 | AccessID 44 | AccessID 45
Entered by:
Administrator KiMoSysFirst name: Administrator
Affiliation: INESC-ID/IST
Homepage: http://kdbio.inesc-id.pt/kimosys
Interests: mathematical modeling, accessible data, use of data
Associated by: kimosys (at) kdbio.inesc-id.pt
Created: 2013-04-24 15:07:11 UTC
Updated: 2018-07-21 20:34:09 UTC
Version: 1
Status: (reviewed) 2013-12-06 18:05:50 UTC
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