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General Information
Manuscript title Metabolomics-driven quantitative analysis of ammonia assimilation in E. coli.
PubMed ID 19690571
Journal Molecular Systems Biology
Year 2009
Authors Jie Yuan, Christopher D Doucette, William U Fowler, Xiao-Jiang Feng, Matthew Piazza, Herschel A Rabitz, Ned S Wingreen and Joshua D Rabinowitz
Affiliations Lewis Sigler Institute for Integrative Genomics, Princeton University, Princeton, NJ, USA and Department of Chemistry, Princeton University, Princeton, NJ, USA
Keywords E. coli, ammonia assimilation, nitrogen upshift, differential equations, sensitivity analysis
Full text article
Yuan_2009.pdf
Project name not specified
Data used for Model building and Model validation

Model Information

Model name Nitrogen assimilation model
Organism Escherichia coli
Model type ordinary differential equations
Category Metabolism
Number of reactions 14
Number of species 6
Number of regulators 7
Number of parameters 45
Number of compartments 1
Dilution rate (h-1)
Model file(s) and history
LATEST KIMOMODELID25.xml (2014-04-11 17:38:32 UTC by Administrator KiMoSys ) Preview Simulate
Notes
not specified
Software written in C++
BioModels or JWS Online ID
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Related Model(s): AccessID 13 | AccessID 16 | AccessID 36 | AccessID 38 | AccessID 40 | AccessID 42 | AccessID 43 | AccessID 44 | AccessID 45


Submission and curation

Entered by: Administrator KiMoSysFirst name: Administrator
Affiliation: INESC-ID/IST
Homepage: http://kdbio.inesc-id.pt/kimosys
Interests: mathematical modeling, accessible data, use of data

Created: 2013-06-12 13:43:10 UTC

Updated: 2014-06-30 17:56:44 UTC

Version: 0

Status: (reviewed) 2013-12-06 18:05:51 UTC

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