Detail View - Model AccessID 41
General Information
Manuscript title | Improved kinetic model of Escherichia coli central carbon metabolism in batch and continuous cultures |
PubMed ID | 29054464 |
Journal | Journal of Bioscience and Bioengineering |
Year | 2018 |
Authors | Hiroyuki Kurata and Yurie Sugimoto |
Affiliations | Department of Bioscience and Bioinformatics, Kyushu Institute of Technology, 680 -4 Kawazu, Iizuka, Fukuoka 820 -8502, Japan |
Keywords | Kinetic model, Synthetic biology, Central carbon metabolism, Dynamic simulation, Escherichia coli |
Full text article |
Kurata_2018.pdf |
Project name | not specified |
Data used for | Model building and Model validation |
Model Information
Model name | Continuous kinetic model of Escherichia coli |
Organism | Escherichia coli |
Associated Data EntryID |
Escherichia coli (Data EntryID:35) Escherichia coli (Data EntryID:104) Escherichia coli (Data EntryID:105) |
Model type | ordinary differential equations |
Category | Metabolism |
Number of reactions | 44 |
Number of species | 27 |
Number of regulators | not specified |
Number of parameters | 351 |
Number of compartments | 1 |
Dilution rate (h-1) | 0.2, 0.4, 0.5 and 0.7 |
Model file(s) and history |
LATEST KIMOMODELID41.zip
(2018-07-24 15:46:04 UTC
by Administrator KiMoSysFirst name: Administrator Affiliation: INESC-ID/IST Homepage: http://kdbio.inesc-id.pt/kimosys Interests: mathematical modeling, accessible data, use of data ) |
Notes |
Kinetic model source: http://www.cadlive.jp/cadlive_main/Softwares/KineticModel/Ecolimetabolism.html.
|
Software | MATLAB (MathWorks) |
BioModels or JWS Online ID | — |
Export metadata |
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Related Model(s): AccessID 13 | AccessID 16 | AccessID 25 | AccessID 36 | AccessID 38 | AccessID 40 | AccessID 42 | AccessID 43 | AccessID 44 | AccessID 45
Entered by:
Administrator KiMoSysFirst name: Administrator
Affiliation: INESC-ID/IST
Homepage: http://kdbio.inesc-id.pt/kimosys
Interests: mathematical modeling, accessible data, use of data
Associated by: kimosys (at) kdbio.inesc-id.pt
Created: 2018-07-20 16:54:23 UTC
Updated: 2018-07-24 16:12:08 UTC
Version: 5
Status: (reviewed) 2018-07-20 16:55:55 UTC
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Downloads: 177