Detail View - Data AccessID 73
General Information
Manuscript title | Overexpression of isocitrate lyase-glyoxylate bypass influence on metabolism in Aspergillus niger. |
PubMed ID | 19271267 |
Journal | Metabolic Engineering |
Year | 2009 |
Authors | S. Meijer, J Otero, R. Olivares, M.R. Andersen, L. Olsson, J. Nielsen |
Affiliations | Department for Systems Biology, Center for Microbial Biotechnology, Building 223, Technical University of Denmark, Lyngby, Denmark. |
Keywords | Aspergillus niger, isocitrate lyase over-expression, glyoxylate bypass |
Full text article | Meijer_2009.pdf |
Project name | not specified |
Experiment Description
Organism | Aspergillus niger |
Strain | N402 (W.T.) and icl overexpression |
Data type | flux measurements |
Data units | % substrate uptake |
Execution date | not specified |
Experimental Details
Temperature (°C) | 30.0 |
pH | 2.5 |
Carbon source | glucose |
Culture mode | batch |
Process condition | aerobic |
Dilution rate (h⁻¹) | not specified |
Working volume (L) | 2.0 |
Biomass concentration (g/L) | 2.0-4.0 |
Medium composition | Defined medium: 5 g/L of 1-13C glucose, 10 g/L NaNO3, 3 g/L KH2PO4, 2 g/L MgSO4.7H2O, 2 g/L NaCl, 0.2 g/L CaCl2.2H2O, 0.5 ml/L antifoam and 1 ml/L trace element solution 2. The trace element solution 2 contained 14.3 g/L ZnSO4.7H2O, 2.5 g/L CuSO4.5H2O, 0.5 g/L NiCl2.6H2O, 7 g/L MnCl2.2H2O and 13.8 g/L FeSO4.7H2O. |
General protocol information |
Flux analysis method:
13C constrained MFA Platform: GC-MS |
Methods description - Notes | GC–MS analysis - GC–MS analysis was performed on an Agilent (PaloAlto,CA, USA) HP 6890 gas chromatograph coupled to a HP5973 quadrupole mass selective detector in positive electron impact ionization (EI+) operated at an electron energy of 70 eV. The GC was equipped with a 4. ... --------------References------------------
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Data file |
KIMODATAID73_v0.xlsx
|
Alternative format(s) |
KIMODATAID73_wt.txt
KIMODATAID73_overexpression.txt KIMODATAID73_wt_reaction_SBtab.csv Preview KIMODATAID73_overexpression_reaction_SBtab.csv Preview |
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metadataDataEntryID73.rdf
XML: metadataDataEntryID73.xml Plain text: metadataDataEntryID73.txt |
Related Data: AccessID 72
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Administrator KiMoSysFirst name: Administrator
Affiliation: INESC-ID/IST
Homepage: http://kdbio.inesc-id.pt/kimosys
Interests: mathematical modeling, accessible data, use of data
Created: 2013-06-23 12:31:56 UTC
Updated: 2020-04-24 16:10:34 UTC
Version: 0
Status: (reviewed) 2013-12-06 17:17:38 UTC
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