Detail View - Data AccessID 57
General Information
Manuscript title | Glucose-methanol co-utilization in Pichia pastoris studied by metabolomics ans instationary 13C flux analysis. |
PubMed ID | 23448228 |
Journal | BMC Systems Biology |
Year | 2013 |
Authors | Joel Jordà, Camilo Suarez, Marc Carnicer, Angela ten Pierick, Joseph J Heijnen, Walter van Gulik, Pau Ferrer, Joan Albiol and Aljoscha Wahl |
Affiliations | Department of Chemical Engineering, Escola d’Enginyeria, Universitat Autònoma de Barcelona, Bellaterra, Cerdanyola del Vallès, Spain |
Keywords | Pichia pastoris, instationary 13C-metabolic flux analysis, GC-MS, LC-MS |
Full text article | Jorda_2013.pdf |
Project name | not specified |
Experiment Description
Organism | Pichia pastoris |
Strain | X-33 |
Data type | flux measurements |
Data units | (mmol/gDW.h) |
Execution date | not specified |
Experimental Details
Temperature (°C) | 25.0 |
pH | 5.0 |
Carbon source | glucose |
Culture mode | chemostat |
Process condition | aerobic |
Dilution rate (h⁻¹) | 0.09 |
Working volume (L) | 1.0 |
Biomass concentration (g/L) | 4.0 |
Medium composition | 7.04 g/l Glucose monohydrate, 1.6 g/l Methanol, 0.915 g/l citric acid, 2 g/l (NH4)2 HPO4, 0.3 g/l MgSO4.7H2O, 1.4 g/l KH2PO4, 0.01 g/l CaCl2 · 2H2O, 0.5 ml/l trace salt solution, 0.3 ml/l biotin (0.2 g/l) |
General protocol information |
Flux analysis method:
13C constrained MFA Platform: GC-MS, LC-MS |
Methods description - Notes | Labelling experiment - After a minimum of five residence times of continuous cultivation, the feed was switched to the labelled medium. The composition of the labelling feed was based on the approach proposed by Nöh and Wiechert [1]. The feed contained for glucose, 80% [1-13 ... ---------References----------
|
Data file |
KIMODATAID57_v0.xlsx
|
Alternative format(s) |
no file uploaded |
Export metadata |
RDF:
metadataDataEntryID57.rdf
XML: metadataDataEntryID57.xml Plain text: metadataDataEntryID57.txt |
Related Data: AccessID 55 | AccessID 113 | AccessID 114
Entered by:
Administrator KiMoSysFirst name: Administrator
Affiliation: INESC-ID/IST
Homepage: http://kdbio.inesc-id.pt/kimosys
Interests: mathematical modeling, accessible data, use of data
Created: 2013-06-04 11:32:58 UTC
Updated: 2020-04-24 16:10:32 UTC
Version: 0
Status: (reviewed) 2013-12-06 17:17:38 UTC
Views: 267
Downloads: 79
Associated Models
Here we can find relevant models associated with Data EntryID 57:
Model EntryID |
Model name | Category | Model Type | Data used for | Access |
---|
Associate models to data
- Several models can be associated.