Detail View - Data AccessID 81
General Information
| Manuscript title | Division of labor by dual feedback regulators controls JAK2/STAT5 signaling over broad ligand range. |
| PubMed ID | 21772264 |
| Journal | Molecular Systems Biology |
| Year | 2011 |
| Authors | Julie Bachmann, Andreas Raue, Marcel Schilling, Martin E. Boehm, Clemens Kreutz, Daniel Kaschek, Hauke Busch, Norbert Gretz, Wolf D. Lehmann, Jens Timmer and Ursula Klingmueller |
| Affiliations | Division of Systems Biology of Signal Transduction, DKFZ-ZMBH Alliance, German Cancer Research Center, Heidelberg, Germany |
| Keywords | apoptosis, erythropoietin, mathematical modeling, negative feedback, SOCS, simulation and data analysis, signal transduction |
| Full text article |
Bachmann_2011.pdf
|
| Project name | not specified |
Experiment Description
| Organism | Mus musculus |
| Strain | E13.5 Balb/c |
| Data type | enzyme/protein concentrations |
| Data units | (a.u.) |
| Execution date | not specified |
Experimental Details
| Temperature (°C) | 37.0 |
| pH | not specified |
| Carbon source | not specified |
| Culture mode | batch |
| Process condition | not specified |
| Dilution rate (h⁻¹) | — |
| Working volume (L) | not specified |
| Biomass concentration (g/L) | 4.0×10^7 (cells/L) |
| Medium composition | Cultivated for 12–14 h in IMDM (Invitrogen), 30% fetal calf serum (FCS), and 50 μM β-mercaptoethanol supplemented with 0.5 U/ml Epo (Cilag-Jansen). |
| General protocol information |
Measurement method:
immunoblotting |
| Methods description - Notes | Time course experiments, cell lysis and quantitative immunoblotting - erythroid progenitor cells were washed three times in medium and starved in Panserin 401 (Pan Biotech) supplemented with 50 µM ß-mercaptoethanol and 1 mg/ml BSA (Sigma-Aldrich) for 1 h. Subsequently, cells ... ---------------------References------------------
|
| Data file |
KIMODATAID81_v0.xlsx
|
| Alternative format(s) |
KIMODATAID81_transducted_timeseries.csv
Preview
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| Export metadata |
RDF:
metadataDataEntryID81.rdf
XML: metadataDataEntryID81.xml Plain text: metadataDataEntryID81.txt |
Entered by:
Administrator KiMoSysFirst name: Administrator
Affiliation: INESC-ID/IST
Homepage: http://kdbio.inesc-id.pt/kimosys
Interests: mathematical modeling, accessible data, use of data
Created: 2014-04-23 15:16:48 UTC
Updated: 2020-04-24 16:10:34 UTC
Version: 0
Status: (reviewed) 2018-07-07 21:38:44 UTC
Views: 587
Downloads: 128
Associated Models
Here we can find relevant models associated with Data EntryID 81:
| Model EntryID |
Model name | Category | Model Type | Data used for | Access |
|---|---|---|---|---|---|
| 31 | transcriptional model of JAK2/STAT5 signaling | Signal | ordinary differential equations | Model building |
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