Detail View - Model AccessID 38
General Information
Manuscript title | Development of an accurate kinetic model for the central carbon metabolism of Escherichia coli |
PubMed ID | 27329289 |
Journal | Microbial Cell Factories |
Year | 2016 |
Authors | Nusrat Jahan, Kazuhiro Maeda, Yu Matsuoka, Yurie Sugimoto and Hiroyuki Kurata |
Affiliations | Department of Bioscience and Bioinformatics, Kyushu Institute of Technology, 680‑4 Kawazu, Iizuka, Fukuoka 820‑8502, Japan |
Keywords | Systems biology, Rational design, Dynamic model, Enzyme kinetics, Transcription factor, Signal transduction, Allosteric enzyme |
Full text article |
Jahan_2016.pdf |
Project name | not specified |
Data used for | Model building and Model validation |
Model Information
Model name | E. coli Central Carbon Metabolism | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Organism | Escherichia coli | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Associated Data EntryID |
Escherichia coli (Data EntryID:35) Escherichia coli (Data EntryID:38) Escherichia coli (Data EntryID:96) |
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Model type | ordinary differential equations | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Category | Metabolism | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Number of reactions | 129 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Number of species | 52 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Number of regulators | not specified | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Number of parameters | 341 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Number of compartments | 1 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Dilution rate (h-1) | 0.2, 0.4, 0.5 and 0.7 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Model file(s) and history |
LATEST KIMOMODELID38.xml
(2018-07-20 16:47:46 UTC
by Administrator KiMoSysFirst name: Administrator Affiliation: INESC-ID/IST Homepage: http://kdbio.inesc-id.pt/kimosys Interests: mathematical modeling, accessible data, use of data ) Preview Preview file KIMOMODELID38.xml<?xml version='1.0' encoding='UTF-8'?> <!-- Created by COPASI version 4.16 (Build 104) on 2016-01-04 17:40 with libSBML version 5.11.1. --> <sbml xmlns:layout='http://www.sbml.org/sbml/level3/version1/layout/version1' level='3' xmlns:render='http://www.sbml.org/sbml/level3/version1/render/version1' layout:required='false' render:required='false' version='1' xmlns='http://www.sbml.org/sbml/level3/version1/core'> <model areaUnits='area' extentUnits='substance' id='Program_04_09_2015_KM' lengthUnits='length' metaid='COPASI0' name='E. coli Central Carbon Metabolism' substanceUnits='substance' timeUnits='time' volumeUnits='volume'> <annotation> <COPASI xmlns='http://www.copasi.org/static/sbml'> <rdf:RDF xmlns:CopasiMT='http://www.copasi.org/RDF/MiriamTerms#' 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<vCard:EMAIL>n791203j@bio.kyutech.ac.jp</vCard:EMAIL> <vCard:N> <rdf:Description> <vCard:Family>Jahan</vCard:Family> <vCard:Given>Nusrat</vCard:Given> </rdf:Description> </vCard:N> <vCard:ORG> <rdf:Description> <vCard:Orgname>Kyushu Institute of Technology</vCard:Orgname> </rdf:Description> </vCard:ORG> </rdf:Description> </rdf:li> <rdf:li> <rdf:Description> <vCard:EMAIL>n238203y@bio.kyutech.ac.jp</vCard:EMAIL> <vCard:N> <rdf:Description> <vCard:Family>Sugimoto</vCard:Family> <vCard:Given>Yurie</vCard:Given> </rdf:Description> </vCard:N> <vCard:ORG> <rdf:Description> <vCard:Orgname>Kyushu Institute of Technology</vCard:Orgname> </rdf:Description> </vCard:ORG> </rdf:Description> </rdf:li> <rdf:li> <rdf:Description> <vCard:EMAIL>kmaeda@bio.kyutech.ac.jp</vCard:EMAIL> <vCard:N> <rdf:Description> <vCard:Family>Maeda</vCard:Family> <vCard:Given>Kazuhiro</vCard:Given> </rdf:Description> </vCard:N> <vCard:ORG> <rdf:Description> <vCard:Orgname>Kyushu Institute of Technology</vCard:Orgname> 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</apply> <ci> default </ci> </apply> </lambda> </math> </functionDefinition> <functionDefinition id='Function_for_vNonPTS_medium' metaid='COPASI132' name='Function for vNonPTS_medium'> <math xmlns='http://www.w3.org/1998/Math/MathML'> <lambda> <bvar> <ci> EIIA </ci> </bvar> <bvar> <ci> GLCex </ci> </bvar> <bvar> <ci> KNonPTS_I </ci> </bvar> <bvar> <ci> KNonPTS_S </ci> </bvar> <bvar> <ci> X </ci> </bvar> <bvar> <ci> default </ci> </bvar> <bvar> <ci> rho </ci> </bvar> <bvar> <ci> vNonPTS_max </ci> </bvar> <apply> <divide/> <apply> <divide/> <apply> <times/> <apply> <divide/> <apply> <times/> <ci> vNonPTS_max </ci> <ci> GLCex </ci> </apply> <apply> <plus/> <ci> KNonPTS_S </ci> <apply> <times/> <apply> <plus/> <cn type='integer'> 1 </cn> <apply> <divide/> <ci> EIIA </ci> <ci> KNonPTS_I </ci> </apply> </apply> <ci> GLCex </ci> </apply> </apply> </apply> <ci> X </ci> </apply> <ci> rho </ci> </apply> <ci> default </ci> </apply> </lambda> </math> </functionDefinition> <functionDefinition id='Function_for_vG_ppc' metaid='COPASI133' name='Function for vG_ppc'> <math xmlns='http://www.w3.org/1998/Math/MathML'> <lambda> <bvar> <ci> SS_Ppc </ci> </bvar> <bvar> <ci> default </ci> </bvar> <bvar> <ci> kdegr </ci> </bvar> <bvar> <ci> mu </ci> </bvar> <apply> <divide/> <apply> <times/> <apply> <plus/> <ci> mu </ci> <ci> kdegr </ci> </apply> <ci> SS_Ppc </ci> </apply> <ci> default </ci> </apply> </lambda> </math> </functionDefinition> <functionDefinition id='Function_for_vE_Pck' metaid='COPASI134' name='Function for vE_Pck'> <math xmlns='http://www.w3.org/1998/Math/MathML'> <lambda> <bvar> <ci> ADP </ci> </bvar> <bvar> <ci> ATP </ci> </bvar> <bvar> <ci> KPck_ADP_i </ci> </bvar> <bvar> <ci> KPck_ATP_I </ci> </bvar> <bvar> <ci> KPck_ATP_i </ci> </bvar> <bvar> <ci> KPck_OAA </ci> </bvar> <bvar> <ci> KPck_OAA_I </ci> </bvar> <bvar> <ci> KPck_PEP </ci> </bvar> <bvar> <ci> KPck_PEP_i </ci> </bvar> <bvar> <ci> OAA </ci> </bvar> <bvar> <ci> PEP </ci> </bvar> <bvar> <ci> Pck </ci> </bvar> <bvar> <ci> default </ci> </bvar> <bvar> <ci> kPck_cat </ci> </bvar> <apply> <divide/> <apply> <divide/> <apply> <divide/> <apply> <times/> <ci> Pck </ci> <ci> kPck_cat </ci> <ci> OAA </ci> <ci> ATP </ci> </apply> <ci> ADP </ci> </apply> <apply> <plus/> <apply> <divide/> <apply> <times/> <ci> KPck_OAA </ci> <ci> ATP </ci> </apply> <ci> ADP </ci> </apply> <apply> <divide/> <apply> <times/> <ci> OAA </ci> <ci> ATP </ci> </apply> <ci> ADP </ci> </apply> <apply> <divide/> <apply> <times/> <ci> KPck_ATP_i </ci> <ci> KPck_OAA </ci> </apply> <ci> KPck_ADP_i </ci> </apply> <apply> <times/> <apply> <divide/> <apply> <times/> <ci> KPck_ATP_i </ci> <ci> KPck_OAA </ci> </apply> <apply> <times/> <ci> KPck_PEP </ci> <ci> KPck_ADP_i </ci> </apply> </apply> <ci> PEP </ci> </apply> <apply> <times/> <apply> <divide/> <apply> <times/> <apply> <divide/> <apply> <times/> <ci> KPck_ATP_i </ci> <ci> KPck_OAA </ci> </apply> <apply> <times/> <ci> KPck_PEP_i </ci> <ci> KPck_ATP_I </ci> </apply> </apply> <ci> ATP </ci> </apply> <ci> ADP </ci> </apply> <ci> PEP </ci> </apply> <apply> <times/> <apply> <divide/> <apply> <times/> <ci> KPck_ATP_i </ci> <ci> KPck_OAA </ci> </apply> <apply> <times/> <ci> KPck_ADP_i </ci> <ci> KPck_OAA_I </ci> </apply> </apply> <ci> OAA </ci> </apply> </apply> </apply> <ci> default </ci> </apply> </lambda> </math> </functionDefinition> <functionDefinition id='Function_for_vNonPTS' metaid='COPASI135' name='Function for vNonPTS'> <math xmlns='http://www.w3.org/1998/Math/MathML'> <lambda> <bvar> <ci> EIIA </ci> </bvar> <bvar> <ci> GLCex </ci> </bvar> <bvar> <ci> KNonPTS_I </ci> </bvar> <bvar> <ci> KNonPTS_S </ci> </bvar> <bvar> <ci> default </ci> </bvar> <bvar> <ci> vNonPTS_max </ci> </bvar> <apply> <divide/> <apply> <divide/> <apply> <times/> <ci> vNonPTS_max </ci> <ci> GLCex </ci> </apply> <apply> <plus/> <ci> KNonPTS_S </ci> <apply> <times/> <apply> <plus/> <cn type='integer'> 1 </cn> <apply> <divide/> <ci> EIIA </ci> <ci> KNonPTS_I </ci> </apply> </apply> <ci> GLCex </ci> </apply> </apply> </apply> <ci> default </ci> </apply> </lambda> </math> </functionDefinition> <functionDefinition id='Function_for_vPTS1' metaid='COPASI136' name='Function for vPTS1'> <math xmlns='http://www.w3.org/1998/Math/MathML'> <lambda> <bvar> <ci> EIIA </ci> </bvar> <bvar> <ci> EIIAP </ci> </bvar> <bvar> <ci> PEP </ci> </bvar> <bvar> <ci> PYR </ci> </bvar> <bvar> <ci> default </ci> </bvar> <bvar> <ci> kPTS1 </ci> </bvar> <bvar> <ci> kmPTS1 </ci> </bvar> <apply> <divide/> <apply> <minus/> <apply> <times/> <ci> kPTS1 </ci> <ci> PEP </ci> <ci> EIIA </ci> </apply> <apply> <times/> <ci> kmPTS1 </ci> <ci> PYR </ci> <ci> EIIAP </ci> </apply> </apply> <ci> default </ci> </apply> </lambda> </math> </functionDefinition> <functionDefinition id='Function_for_vG_pfkA' metaid='COPASI137' name='Function for vG_pfkA'> <math xmlns='http://www.w3.org/1998/Math/MathML'> <lambda> <bvar> <ci> Cra </ci> </bvar> <bvar> <ci> KpfkA_Cra </ci> </bvar> <bvar> <ci> default </ci> </bvar> <bvar> <ci> kexpr </ci> </bvar> <bvar> <ci> mu </ci> </bvar> <bvar> <ci> vpfkA_Cra_bound </ci> </bvar> <bvar> <ci> vpfkA_Cra_unbound </ci> </bvar> <apply> <divide/> <apply> <times/> <ci> mu </ci> <ci> kexpr </ci> <apply> <plus/> <apply> <times/> <apply> <minus/> <cn type='integer'> 1 </cn> <apply> <divide/> <ci> Cra </ci> <apply> <plus/> <ci> Cra </ci> <ci> KpfkA_Cra </ci> </apply> </apply> </apply> <ci> vpfkA_Cra_unbound </ci> </apply> <apply> <times/> <apply> <divide/> <ci> Cra </ci> <apply> <plus/> <ci> Cra </ci> <ci> KpfkA_Cra </ci> </apply> </apply> <ci> vpfkA_Cra_bound </ci> </apply> </apply> </apply> <ci> default </ci> </apply> </lambda> </math> </functionDefinition> <functionDefinition id='Function_for_vPTS4_medium' metaid='COPASI138' name='Function for vPTS4_medium'> <math xmlns='http://www.w3.org/1998/Math/MathML'> <lambda> <bvar> <ci> EIIAP </ci> </bvar> <bvar> <ci> GLCex </ci> </bvar> <bvar> <ci> KPTS_EIIA </ci> </bvar> <bvar> <ci> KPTS_GLC </ci> </bvar> <bvar> <ci> X </ci> </bvar> <bvar> <ci> default </ci> </bvar> <bvar> <ci> rho </ci> </bvar> <bvar> <ci> vPTS4_max </ci> </bvar> <apply> <divide/> <apply> <divide/> <apply> <times/> <apply> <divide/> <apply> <times/> <ci> vPTS4_max </ci> <ci> EIIAP </ci> <ci> GLCex </ci> </apply> <apply> <times/> <apply> <plus/> <ci> KPTS_EIIA </ci> <ci> EIIAP </ci> </apply> <apply> <plus/> <ci> KPTS_GLC </ci> <ci> GLCex </ci> </apply> </apply> </apply> <ci> X </ci> </apply> <ci> rho </ci> </apply> <ci> default </ci> </apply> </lambda> </math> </functionDefinition> <functionDefinition id='Function_for_vgrowth' metaid='COPASI139' name='Function for vgrowth'> <math xmlns='http://www.w3.org/1998/Math/MathML'> <lambda> <bvar> <ci> X </ci> </bvar> <bvar> <ci> default </ci> </bvar> <bvar> <ci> mu </ci> </bvar> <apply> <divide/> <apply> <times/> <ci> mu </ci> <ci> X </ci> </apply> <ci> default </ci> </apply> </lambda> </math> </functionDefinition> <functionDefinition id='Function_for_vG_pdh' metaid='COPASI140' name='Function for vG_pdh'> <math xmlns='http://www.w3.org/1998/Math/MathML'> <lambda> <bvar> <ci> Kpdh_PdhR </ci> </bvar> <bvar> <ci> PdhR </ci> </bvar> <bvar> <ci> default </ci> </bvar> <bvar> <ci> kexpr </ci> </bvar> <bvar> <ci> mu </ci> </bvar> <bvar> <ci> vpdh_PdhR_bound </ci> </bvar> <bvar> <ci> vpdh_PdhR_unbound </ci> </bvar> <apply> <divide/> <apply> <times/> <ci> mu </ci> <ci> kexpr </ci> <apply> <plus/> <apply> <times/> <apply> <minus/> <cn type='integer'> 1 </cn> <apply> <divide/> <ci> PdhR </ci> <apply> <plus/> <ci> PdhR </ci> <ci> Kpdh_PdhR </ci> </apply> </apply> </apply> <ci> vpdh_PdhR_unbound </ci> </apply> <apply> <times/> <apply> <divide/> <ci> PdhR </ci> <apply> <plus/> <ci> PdhR </ci> <ci> Kpdh_PdhR </ci> </apply> </apply> <ci> vpdh_PdhR_bound </ci> </apply> </apply> </apply> <ci> default </ci> </apply> </lambda> </math> </functionDefinition> <functionDefinition id='Function_for_vG_sdhCDAB' metaid='COPASI141' name='Function for vG_sdhCDAB'> <math xmlns='http://www.w3.org/1998/Math/MathML'> <lambda> <bvar> <ci> CrpcAMP </ci> </bvar> <bvar> <ci> KsdhCDAB_Crp </ci> </bvar> <bvar> <ci> default </ci> </bvar> <bvar> <ci> kexpr </ci> </bvar> <bvar> <ci> mu </ci> </bvar> <bvar> <ci> nsdhCDAB </ci> </bvar> <bvar> <ci> vsdhCDAB_Crp_bound </ci> </bvar> <bvar> <ci> vsdhCDAB_Crp_unbound </ci> </bvar> <apply> <divide/> <apply> <times/> <ci> mu </ci> <ci> kexpr </ci> <apply> <plus/> <apply> <times/> <apply> <minus/> <cn type='integer'> 1 </cn> <apply> <divide/> <apply> <power/> <ci> CrpcAMP </ci> <ci> nsdhCDAB </ci> </apply> <apply> <plus/> <apply> <power/> <ci> CrpcAMP </ci> <ci> nsdhCDAB </ci> </apply> <apply> <power/> <ci> KsdhCDAB_Crp </ci> <ci> nsdhCDAB </ci> </apply> </apply> </apply> </apply> <ci> vsdhCDAB_Crp_unbound </ci> </apply> <apply> <times/> <apply> <divide/> <apply> <power/> <ci> CrpcAMP </ci> <ci> nsdhCDAB </ci> </apply> <apply> <plus/> <apply> <power/> <ci> CrpcAMP </ci> <ci> nsdhCDAB </ci> </apply> <apply> <power/> <ci> KsdhCDAB_Crp </ci> <ci> nsdhCDAB </ci> </apply> </apply> </apply> <ci> vsdhCDAB_Crp_bound </ci> </apply> </apply> </apply> <ci> default </ci> </apply> </lambda> </math> </functionDefinition> <functionDefinition id='Function_for_vE_Pyk' metaid='COPASI142' name='Function for vE_Pyk'> <math xmlns='http://www.w3.org/1998/Math/MathML'> <lambda> <bvar> <ci> ADP </ci> </bvar> <bvar> <ci> AMP </ci> </bvar> <bvar> <ci> ATP </ci> </bvar> <bvar> <ci> FBP </ci> </bvar> <bvar> <ci> KPyk_ADP </ci> </bvar> <bvar> <ci> KPyk_AMP </ci> </bvar> <bvar> <ci> KPyk_ATP </ci> </bvar> <bvar> <ci> KPyk_FBP </ci> </bvar> <bvar> <ci> KPyk_PEP </ci> </bvar> <bvar> <ci> LPyk </ci> </bvar> <bvar> <ci> PEP </ci> </bvar> <bvar> <ci> Pyk </ci> </bvar> <bvar> <ci> default </ci> </bvar> <bvar> <ci> kPyk_cat </ci> </bvar> <bvar> <ci> nPyk </ci> </bvar> <apply> <divide/> <apply> <divide/> <apply> <times/> <ci> Pyk </ci> <ci> kPyk_cat </ci> <ci> PEP </ci> <apply> <power/> <apply> <plus/> <apply> <divide/> <ci> PEP </ci> <ci> KPyk_PEP </ci> </apply> <cn type='integer'> 1 </cn> </apply> <apply> <minus/> <ci> nPyk </ci> <cn type='integer'> 1 </cn> </apply> </apply> <ci> ADP </ci> </apply> <apply> <times/> <ci> KPyk_PEP </ci> <apply> <plus/> <apply> <times/> <ci> LPyk </ci> <apply> <power/> <apply> <divide/> <apply> <plus/> <cn type='integer'> 1 </cn> <apply> <divide/> <ci> ATP </ci> <ci> KPyk_ATP </ci> </apply> </apply> <apply> <plus/> <apply> <divide/> <ci> FBP </ci> <ci> KPyk_FBP </ci> </apply> <apply> <divide/> <ci> AMP </ci> <ci> KPyk_AMP </ci> </apply> <cn type='integer'> 1 </cn> </apply> </apply> <ci> nPyk </ci> </apply> </apply> <apply> <power/> <apply> <plus/> <apply> <divide/> <ci> PEP </ci> <ci> KPyk_PEP </ci> </apply> <cn type='integer'> 1 </cn> </apply> <ci> nPyk </ci> </apply> </apply> <apply> <plus/> <ci> ADP </ci> <ci> KPyk_ADP </ci> </apply> </apply> </apply> <ci> default </ci> </apply> </lambda> </math> </functionDefinition> <functionDefinition id='Function_for_vE_Ru5P' metaid='COPASI143' name='Function for vE_Ru5P'> <math xmlns='http://www.w3.org/1998/Math/MathML'> <lambda> <bvar> <ci> KRu5P_eq </ci> </bvar> <bvar> <ci> RU5P </ci> </bvar> <bvar> <ci> X5P </ci> </bvar> <bvar> <ci> default </ci> </bvar> <bvar> <ci> vRu5P_max </ci> </bvar> <apply> <divide/> <apply> <times/> <ci> vRu5P_max </ci> <apply> <minus/> <ci> RU5P </ci> <apply> <divide/> <ci> X5P </ci> <ci> KRu5P_eq </ci> </apply> </apply> </apply> <ci> default </ci> </apply> </lambda> </math> </functionDefinition> <functionDefinition id='Function_for_vE_Pfk' metaid='COPASI144' name='Function for vE_Pfk'> <math xmlns='http://www.w3.org/1998/Math/MathML'> <lambda> <bvar> <ci> A </ci> </bvar> <bvar> <ci> ADP </ci> </bvar> <bvar> <ci> ATP </ci> </bvar> <bvar> <ci> B </ci> </bvar> <bvar> <ci> F6P </ci> </bvar> <bvar> <ci> KPfk_ADP_c </ci> </bvar> <bvar> <ci> KPfk_ATP_s </ci> </bvar> <bvar> <ci> KPfk_F6P_s </ci> </bvar> <bvar> <ci> LPfk </ci> </bvar> <bvar> <ci> Pfk </ci> </bvar> <bvar> <ci> default </ci> </bvar> <bvar> <ci> kPfk_cat </ci> </bvar> <bvar> <ci> nPfk </ci> </bvar> <apply> <divide/> <apply> <divide/> <apply> <times/> <ci> Pfk </ci> <ci> kPfk_cat </ci> <ci> ATP </ci> <ci> F6P </ci> </apply> <apply> <times/> <apply> <plus/> <ci> ATP </ci> <apply> <times/> <ci> KPfk_ATP_s </ci> <apply> <plus/> <cn type='integer'> 1 </cn> <apply> <divide/> <ci> ADP </ci> <ci> KPfk_ADP_c </ci> </apply> </apply> </apply> </apply> <apply> <plus/> <ci> F6P </ci> <apply> <divide/> <apply> <times/> <ci> KPfk_F6P_s </ci> <ci> A </ci> </apply> <ci> B </ci> </apply> </apply> <apply> <plus/> <cn type='integer'> 1 </cn> <apply> <divide/> <ci> LPfk </ci> <apply> <power/> <apply> <plus/> <cn type='integer'> 1 </cn> <apply> <divide/> <apply> <times/> <ci> F6P </ci> <ci> B </ci> </apply> <apply> <times/> <ci> KPfk_F6P_s </ci> <ci> A </ci> </apply> </apply> </apply> <ci> nPfk </ci> </apply> </apply> </apply> </apply> </apply> <ci> default </ci> </apply> </lambda> </math> </functionDefinition> <functionDefinition id='Function_for_vG_pckA' metaid='COPASI145' name='Function for vG_pckA'> <math xmlns='http://www.w3.org/1998/Math/MathML'> <lambda> <bvar> <ci> Cra </ci> </bvar> <bvar> <ci> KpckA_Cra </ci> </bvar> <bvar> <ci> default </ci> </bvar> <bvar> <ci> kexpr </ci> </bvar> <bvar> <ci> mu </ci> </bvar> <bvar> <ci> vpckA_Cra_bound </ci> </bvar> <bvar> <ci> vpckA_Cra_unbound </ci> </bvar> <apply> <divide/> <apply> <times/> <ci> mu </ci> <ci> kexpr </ci> <apply> <plus/> <apply> <times/> <apply> <minus/> <cn type='integer'> 1 </cn> <apply> <divide/> <ci> Cra </ci> <apply> <plus/> <ci> Cra </ci> <ci> KpckA_Cra </ci> </apply> </apply> </apply> <ci> vpckA_Cra_unbound </ci> </apply> <apply> <times/> <apply> <divide/> <ci> Cra </ci> <apply> <plus/> <ci> Cra </ci> <ci> KpckA_Cra </ci> </apply> </apply> <ci> vpckA_Cra_bound </ci> </apply> </apply> </apply> <ci> default </ci> </apply> </lambda> </math> </functionDefinition> <functionDefinition id='Function_for_vD_GOX' metaid='COPASI146' name='Function for vD_GOX'> <math xmlns='http://www.w3.org/1998/Math/MathML'> <lambda> <bvar> <ci> GOX </ci> </bvar> <bvar> <ci> default </ci> </bvar> <bvar> <ci> mu </ci> </bvar> <apply> <divide/> <apply> <times/> <ci> mu </ci> <ci> GOX </ci> </apply> <ci> default </ci> </apply> </lambda> </math> </functionDefinition> <functionDefinition id='Function_for_vD_Glk' metaid='COPASI147' name='Function for vD_Glk'> <math xmlns='http://www.w3.org/1998/Math/MathML'> <lambda> <bvar> <ci> Glk </ci> </bvar> <bvar> <ci> default </ci> </bvar> <bvar> <ci> kdegr </ci> </bvar> <bvar> <ci> mu </ci> </bvar> <apply> <divide/> <apply> <times/> <apply> <plus/> <ci> mu </ci> <ci> kdegr </ci> </apply> <ci> Glk </ci> </apply> <ci> default </ci> </apply> </lambda> </math> </functionDefinition> <functionDefinition id='Function_for_vD_ICDH' metaid='COPASI148' name='Function for vD_ICDH'> <math xmlns='http://www.w3.org/1998/Math/MathML'> <lambda> <bvar> <ci> ICDH </ci> </bvar> <bvar> <ci> default </ci> </bvar> <bvar> <ci> kdegr </ci> </bvar> <bvar> <ci> mu </ci> </bvar> <apply> <divide/> <apply> <times/> <apply> <plus/> <ci> mu </ci> <ci> kdegr </ci> </apply> <ci> ICDH </ci> </apply> <ci> default </ci> </apply> </lambda> </math> </functionDefinition> <functionDefinition id='Function_for_vD_ICDHP' metaid='COPASI149' name='Function for vD_ICDHP'> <math xmlns='http://www.w3.org/1998/Math/MathML'> <lambda> <bvar> <ci> ICDHP </ci> </bvar> <bvar> <ci> default </ci> </bvar> <bvar> <ci> kdegr </ci> </bvar> <bvar> <ci> mu </ci> </bvar> <apply> <divide/> <apply> <times/> <apply> <plus/> <ci> mu </ci> <ci> kdegr </ci> </apply> <ci> ICDHP </ci> </apply> <ci> default </ci> </apply> </lambda> </math> </functionDefinition> <functionDefinition id='Function_for_vD_ICIT' metaid='COPASI150' name='Function for vD_ICIT'> <math xmlns='http://www.w3.org/1998/Math/MathML'> <lambda> <bvar> <ci> ICIT </ci> </bvar> <bvar> <ci> default </ci> </bvar> <bvar> <ci> mu </ci> </bvar> <apply> <divide/> <apply> <times/> <ci> mu </ci> <ci> ICIT </ci> </apply> <ci> default </ci> </apply> </lambda> </math> </functionDefinition> <functionDefinition id='Function_for_vD_Icl' metaid='COPASI151' name='Function for vD_Icl'> <math xmlns='http://www.w3.org/1998/Math/MathML'> <lambda> <bvar> <ci> Icl </ci> </bvar> <bvar> <ci> default </ci> </bvar> <bvar> <ci> kdegr </ci> </bvar> <bvar> <ci> mu </ci> </bvar> <apply> <divide/> <apply> <times/> <apply> <plus/> <ci> mu </ci> <ci> kdegr </ci> </apply> <ci> Icl </ci> </apply> <ci> default </ci> </apply> </lambda> </math> </functionDefinition> <functionDefinition id='Function_for_vD_KDPG' metaid='COPASI152' name='Function for vD_KDPG'> <math xmlns='http://www.w3.org/1998/Math/MathML'> <lambda> <bvar> <ci> KDPG </ci> </bvar> <bvar> <ci> default </ci> </bvar> <bvar> <ci> mu </ci> </bvar> <apply> <divide/> <apply> <times/> <ci> mu </ci> <ci> KDPG </ci> </apply> <ci> default </ci> </apply> </lambda> </math> </functionDefinition> <functionDefinition id='Function_for_vD_MAL' metaid='COPASI153' name='Function for vD_MAL'> <math xmlns='http://www.w3.org/1998/Math/MathML'> <lambda> <bvar> <ci> MAL </ci> </bvar> <bvar> <ci> default </ci> </bvar> <bvar> <ci> mu </ci> </bvar> <apply> <divide/> <apply> <times/> <ci> mu </ci> <ci> MAL </ci> </apply> <ci> default </ci> </apply> </lambda> </math> </functionDefinition> <functionDefinition id='Function_for_vD_MDH' metaid='COPASI154' name='Function for vD_MDH'> <math xmlns='http://www.w3.org/1998/Math/MathML'> <lambda> <bvar> <ci> MDH </ci> </bvar> <bvar> <ci> default </ci> </bvar> <bvar> <ci> kdegr </ci> </bvar> <bvar> <ci> mu </ci> </bvar> <apply> <divide/> <apply> <times/> <apply> <plus/> <ci> mu </ci> <ci> kdegr </ci> </apply> <ci> MDH </ci> </apply> <ci> default </ci> </apply> </lambda> </math> </functionDefinition> <functionDefinition id='Function_for_vD_MS' metaid='COPASI155' name='Function for vD_MS'> <math xmlns='http://www.w3.org/1998/Math/MathML'> <lambda> <bvar> <ci> MS </ci> </bvar> <bvar> <ci> default </ci> </bvar> <bvar> <ci> kdegr </ci> </bvar> <bvar> <ci> mu </ci> </bvar> <apply> <divide/> <apply> <times/> <apply> <plus/> <ci> mu </ci> <ci> kdegr </ci> </apply> <ci> MS </ci> </apply> <ci> default </ci> </apply> </lambda> </math> </functionDefinition> <functionDefinition id='Function_for_vD_Mez' metaid='COPASI156' name='Function for vD_Mez'> <math xmlns='http://www.w3.org/1998/Math/MathML'> <lambda> <bvar> <ci> Mez </ci> </bvar> <bvar> <ci> default </ci> </bvar> <bvar> <ci> kdegr </ci> </bvar> <bvar> <ci> mu </ci> </bvar> <apply> <divide/> <apply> <times/> <apply> <plus/> <ci> mu </ci> <ci> kdegr </ci> </apply> <ci> Mez </ci> </apply> <ci> default </ci> </apply> </lambda> </math> </functionDefinition> <functionDefinition id='Function_for_vG_pykF' metaid='COPASI157' name='Function for vG_pykF'> <math xmlns='http://www.w3.org/1998/Math/MathML'> <lambda> <bvar> <ci> Cra </ci> </bvar> <bvar> <ci> KpykF_Cra </ci> </bvar> <bvar> <ci> default </ci> </bvar> <bvar> <ci> kexpr </ci> </bvar> <bvar> <ci> mu </ci> </bvar> <bvar> <ci> vpykF_Cra_bound </ci> </bvar> <bvar> <ci> vpykF_Cra_unbound </ci> </bvar> <apply> <divide/> <apply> <times/> <ci> mu </ci> <ci> kexpr </ci> <apply> <plus/> <apply> <times/> <apply> <minus/> <cn type='integer'> 1 </cn> <apply> <divide/> <ci> Cra </ci> <apply> <plus/> <ci> Cra </ci> <ci> KpykF_Cra </ci> </apply> </apply> </apply> <ci> vpykF_Cra_unbound </ci> </apply> <apply> <times/> <apply> <divide/> <ci> Cra </ci> <apply> <plus/> <ci> Cra </ci> <ci> KpykF_Cra </ci> </apply> </apply> <ci> vpykF_Cra_bound </ci> </apply> </apply> </apply> <ci> default </ci> </apply> </lambda> </math> </functionDefinition> <functionDefinition id='Function_for_vG_ppsA' metaid='COPASI158' name='Function for vG_ppsA'> <math xmlns='http://www.w3.org/1998/Math/MathML'> <lambda> <bvar> <ci> Cra </ci> </bvar> <bvar> <ci> KppsA_Cra </ci> </bvar> <bvar> <ci> default </ci> </bvar> <bvar> <ci> kexpr </ci> </bvar> <bvar> <ci> mu </ci> </bvar> <bvar> <ci> vppsA_Cra_bound </ci> </bvar> <bvar> <ci> vppsA_Cra_unbound </ci> </bvar> <apply> <divide/> <apply> <times/> <ci> mu </ci> <ci> kexpr </ci> <apply> <plus/> <apply> <times/> <apply> <minus/> <cn type='integer'> 1 </cn> <apply> <divide/> <ci> Cra </ci> <apply> <plus/> <ci> Cra </ci> <ci> KppsA_Cra </ci> </apply> </apply> </apply> <ci> vppsA_Cra_unbound </ci> </apply> <apply> <times/> <apply> <divide/> <ci> Cra </ci> <apply> <plus/> <ci> Cra </ci> <ci> KppsA_Cra </ci> </apply> </apply> <ci> vppsA_Cra_bound </ci> </apply> </apply> </apply> <ci> default </ci> </apply> </lambda> </math> </functionDefinition> <functionDefinition id='Function_for_vBM_PEP' metaid='COPASI159' name='Function for vBM_PEP'> <math xmlns='http://www.w3.org/1998/Math/MathML'> <lambda> <bvar> <ci> PEP </ci> </bvar> <bvar> <ci> alphaACE </ci> </bvar> <bvar> <ci> alphaGLC </ci> </bvar> <bvar> <ci> default </ci> </bvar> <bvar> <ci> kBM_ACE_PEP </ci> </bvar> <bvar> <ci> kBM_GLC_PEP </ci> </bvar> <apply> <divide/> <apply> <times/> <apply> <plus/> <apply> <times/> <ci> alphaGLC </ci> <ci> kBM_GLC_PEP </ci> </apply> <apply> <times/> <ci> alphaACE </ci> <ci> kBM_ACE_PEP </ci> </apply> </apply> <ci> PEP </ci> </apply> <ci> default </ci> </apply> </lambda> </math> </functionDefinition> <functionDefinition id='Function_for_vBM_FUM' metaid='COPASI160' name='Function for vBM_FUM'> <math xmlns='http://www.w3.org/1998/Math/MathML'> <lambda> <bvar> <ci> FUM </ci> </bvar> <bvar> <ci> alphaACE </ci> </bvar> <bvar> <ci> alphaGLC </ci> </bvar> <bvar> <ci> default </ci> </bvar> <bvar> <ci> kBM_ACE_FUM </ci> </bvar> <bvar> <ci> kBM_GLC_FUM </ci> </bvar> <apply> <divide/> <apply> <times/> <apply> <plus/> <apply> <times/> <ci> alphaGLC </ci> <ci> kBM_GLC_FUM </ci> </apply> <apply> <times/> <ci> alphaACE </ci> <ci> kBM_ACE_FUM </ci> </apply> </apply> <ci> FUM </ci> </apply> <ci> default </ci> </apply> </lambda> </math> </functionDefinition> <functionDefinition id='Function_for_vBM_OAA' metaid='COPASI161' name='Function for vBM_OAA'> <math xmlns='http://www.w3.org/1998/Math/MathML'> <lambda> <bvar> <ci> OAA </ci> </bvar> <bvar> <ci> alphaACE </ci> </bvar> <bvar> <ci> alphaGLC </ci> </bvar> <bvar> <ci> default </ci> </bvar> <bvar> <ci> kBM_ACE_OAA </ci> </bvar> <bvar> <ci> kBM_GLC_OAA </ci> </bvar> <apply> <divide/> <apply> <times/> <apply> <plus/> <apply> <times/> <ci> alphaGLC </ci> <ci> kBM_GLC_OAA </ci> </apply> <apply> <times/> <ci> alphaACE </ci> <ci> kBM_ACE_OAA </ci> </apply> </apply> <ci> OAA </ci> </apply> <ci> default </ci> </apply> </lambda> </math> </functionDefinition> <functionDefinition id='Function_for_vBM_PYR' metaid='COPASI162' name='Function for vBM_PYR'> <math xmlns='http://www.w3.org/1998/Math/MathML'> <lambda> <bvar> <ci> PYR </ci> </bvar> <bvar> <ci> alphaACE </ci> </bvar> <bvar> <ci> alphaGLC </ci> </bvar> <bvar> <ci> default </ci> </bvar> <bvar> <ci> kBM_ACE_PYR </ci> </bvar> <bvar> <ci> kBM_GLC_PYR </ci> </bvar> <apply> <divide/> <apply> <times/> <apply> <plus/> <apply> <times/> <ci> alphaGLC </ci> <ci> kBM_GLC_PYR </ci> </apply> <apply> <times/> <ci> alphaACE </ci> <ci> kBM_ACE_PYR </ci> </apply> </apply> <ci> PYR </ci> </apply> <ci> default </ci> </apply> </lambda> </math> </functionDefinition> <functionDefinition id='Function_for_vBM_R5P' metaid='COPASI163' name='Function for vBM_R5P'> <math xmlns='http://www.w3.org/1998/Math/MathML'> <lambda> <bvar> <ci> R5P </ci> </bvar> <bvar> <ci> alphaACE </ci> </bvar> <bvar> <ci> alphaGLC </ci> </bvar> <bvar> <ci> default </ci> </bvar> <bvar> <ci> kBM_ACE_R5P </ci> </bvar> <bvar> <ci> kBM_GLC_R5P </ci> </bvar> <apply> <divide/> <apply> <times/> <apply> <plus/> <apply> <times/> <ci> alphaGLC </ci> <ci> kBM_GLC_R5P </ci> </apply> <apply> <times/> <ci> alphaACE </ci> <ci> kBM_ACE_R5P </ci> </apply> </apply> <ci> R5P </ci> </apply> <ci> default </ci> </apply> </lambda> </math> </functionDefinition> <functionDefinition id='Function_for_vBM_SUC' metaid='COPASI164' name='Function for vBM_SUC'> <math xmlns='http://www.w3.org/1998/Math/MathML'> <lambda> <bvar> <ci> SUC </ci> </bvar> <bvar> <ci> alphaACE </ci> </bvar> <bvar> <ci> alphaGLC </ci> </bvar> <bvar> <ci> default </ci> </bvar> <bvar> <ci> kBM_ACE_SUC </ci> </bvar> <bvar> <ci> kBM_GLC_SUC </ci> </bvar> <apply> <divide/> <apply> <times/> <apply> <plus/> <apply> <times/> <ci> alphaGLC </ci> <ci> kBM_GLC_SUC </ci> </apply> <apply> <times/> <ci> alphaACE </ci> <ci> kBM_ACE_SUC </ci> </apply> </apply> <ci> SUC </ci> </apply> <ci> default </ci> </apply> </lambda> </math> </functionDefinition> <functionDefinition id='Function_for_vBM_aKG' metaid='COPASI165' name='Function for vBM_aKG'> <math xmlns='http://www.w3.org/1998/Math/MathML'> <lambda> <bvar> <ci> aKG </ci> </bvar> <bvar> <ci> alphaACE </ci> </bvar> <bvar> <ci> alphaGLC </ci> </bvar> <bvar> <ci> default </ci> </bvar> <bvar> <ci> kBM_ACE_aKG </ci> </bvar> <bvar> <ci> kBM_GLC_aKG </ci> </bvar> <apply> <divide/> <apply> <times/> <apply> <plus/> <apply> <times/> <ci> alphaGLC </ci> <ci> kBM_GLC_aKG </ci> </apply> <apply> <times/> <ci> alphaACE </ci> <ci> kBM_ACE_aKG </ci> </apply> </apply> <ci> aKG </ci> </apply> <ci> default </ci> </apply> </lambda> </math> </functionDefinition> <functionDefinition id='Function_for_vD_6PG' metaid='COPASI166' name='Function for vD_6PG'> <math xmlns='http://www.w3.org/1998/Math/MathML'> <lambda> <bvar> <ci> default </ci> </bvar> <bvar> <ci> mu </ci> </bvar> <bvar> <ci> sixPG </ci> </bvar> <apply> <divide/> <apply> <times/> <ci> mu </ci> <ci> sixPG </ci> </apply> <ci> default </ci> </apply> </lambda> </math> </functionDefinition> <functionDefinition id='Function_for_vD_6PGL' metaid='COPASI167' name='Function for vD_6PGL'> <math xmlns='http://www.w3.org/1998/Math/MathML'> <lambda> <bvar> <ci> default </ci> </bvar> <bvar> <ci> mu </ci> </bvar> <bvar> <ci> sixPGL </ci> </bvar> <apply> <divide/> <apply> <times/> <ci> mu </ci> <ci> sixPGL </ci> </apply> <ci> default </ci> </apply> </lambda> </math> </functionDefinition> <functionDefinition id='Function_for_vD_ACEex' metaid='COPASI168' name='Function for vD_ACEex'> <math xmlns='http://www.w3.org/1998/Math/MathML'> <lambda> <bvar> <ci> ACEex </ci> </bvar> <bvar> <ci> D </ci> </bvar> <bvar> <ci> default </ci> </bvar> <apply> <divide/> <apply> <times/> <ci> D </ci> <ci> ACEex </ci> </apply> <ci> default </ci> </apply> </lambda> </math> </functionDefinition> <functionDefinition id='Function_for_vD_AcCoA' metaid='COPASI169' name='Function for vD_AcCoA'> <math xmlns='http://www.w3.org/1998/Math/MathML'> <lambda> <bvar> <ci> AcCoA </ci> </bvar> <bvar> <ci> default </ci> </bvar> <bvar> <ci> mu </ci> </bvar> <apply> <divide/> <apply> <times/> <ci> mu </ci> <ci> AcCoA </ci> </apply> <ci> default </ci> </apply> </lambda> </math> </functionDefinition> <functionDefinition id='Function_for_vD_AcP' metaid='COPASI170' name='Function for vD_AcP'> <math xmlns='http://www.w3.org/1998/Math/MathML'> <lambda> <bvar> <ci> AcP </ci> </bvar> <bvar> <ci> default </ci> </bvar> <bvar> <ci> mu </ci> </bvar> <apply> <divide/> <apply> <times/> <ci> mu </ci> <ci> AcP </ci> </apply> <ci> default </ci> </apply> </lambda> </math> </functionDefinition> <functionDefinition id='Function_for_vD_AceK' metaid='COPASI171' name='Function for vD_AceK'> <math xmlns='http://www.w3.org/1998/Math/MathML'> <lambda> <bvar> <ci> AceK </ci> </bvar> <bvar> <ci> default </ci> </bvar> <bvar> <ci> kdegr </ci> </bvar> <bvar> <ci> mu </ci> </bvar> <apply> <divide/> <apply> <times/> <apply> <plus/> <ci> mu </ci> <ci> kdegr </ci> </apply> <ci> AceK </ci> </apply> <ci> default </ci> </apply> </lambda> </math> </functionDefinition> <functionDefinition id='Function_for_vD_Acs' metaid='COPASI172' name='Function for vD_Acs'> <math xmlns='http://www.w3.org/1998/Math/MathML'> <lambda> <bvar> <ci> Acs </ci> </bvar> <bvar> <ci> default </ci> </bvar> <bvar> <ci> kdegr </ci> </bvar> <bvar> <ci> mu </ci> </bvar> <apply> <divide/> <apply> <times/> <apply> <plus/> <ci> mu </ci> <ci> kdegr </ci> </apply> <ci> Acs </ci> </apply> <ci> default </ci> </apply> </lambda> </math> </functionDefinition> <functionDefinition id='Function_for_vE_Fbp' metaid='COPASI173' name='Function for vE_Fbp'> <math xmlns='http://www.w3.org/1998/Math/MathML'> <lambda> <bvar> <ci> FBP </ci> </bvar> <bvar> <ci> Fbp </ci> </bvar> <bvar> <ci> KFbp_FBP </ci> </bvar> <bvar> <ci> KFbp_PEP </ci> </bvar> <bvar> <ci> LFbp </ci> </bvar> <bvar> <ci> PEP </ci> </bvar> <bvar> <ci> default </ci> </bvar> <bvar> <ci> kFbp_cat </ci> </bvar> <bvar> <ci> nFbp </ci> </bvar> <apply> <divide/> <apply> <divide/> <apply> <times/> <apply> <divide/> <apply> <times/> <ci> Fbp </ci> <ci> kFbp_cat </ci> <ci> FBP </ci> </apply> <ci> KFbp_FBP </ci> </apply> <apply> <power/> <apply> <plus/> <cn type='integer'> 1 </cn> <apply> <divide/> <ci> FBP </ci> <ci> KFbp_FBP </ci> </apply> </apply> <apply> <minus/> <ci> nFbp </ci> <cn type='integer'> 1 </cn> </apply> </apply> </apply> <apply> <plus/> <apply> <power/> <apply> <plus/> <cn type='integer'> 1 </cn> <apply> <divide/> <ci> FBP </ci> <ci> KFbp_FBP </ci> </apply> </apply> <ci> nFbp </ci> </apply> <apply> <divide/> <ci> LFbp </ci> <apply> <power/> <apply> <plus/> <cn type='integer'> 1 </cn> <apply> <divide/> <ci> PEP </ci> <ci> KFbp_PEP </ci> </apply> </apply> <ci> nFbp </ci> </apply> </apply> </apply> </apply> <ci> default </ci> </apply> </lambda> </math> </functionDefinition> <functionDefinition id='Function_for_vE_Fum' metaid='COPASI174' name='Function for vE_Fum'> <math xmlns='http://www.w3.org/1998/Math/MathML'> <lambda> <bvar> <ci> FUM </ci> </bvar> <bvar> <ci> KFum_FUM_m </ci> </bvar> <bvar> <ci> KFum_eq </ci> </bvar> <bvar> <ci> MAL </ci> </bvar> <bvar> <ci> default </ci> </bvar> <bvar> <ci> vFum1_max </ci> </bvar> <bvar> <ci> vFum2_max </ci> </bvar> <apply> <divide/> <apply> <divide/> <apply> <times/> <ci> vFum1_max </ci> <ci> vFum2_max </ci> <apply> <minus/> <ci> FUM </ci> <apply> <divide/> <ci> MAL </ci> <ci> KFum_eq </ci> </apply> </apply> </apply> <apply> <plus/> <apply> <times/> <ci> KFum_FUM_m </ci> <ci> vFum2_max </ci> </apply> <apply> <times/> <ci> vFum2_max </ci> <ci> FUM </ci> </apply> <apply> <divide/> <apply> <times/> <ci> vFum1_max </ci> <ci> MAL </ci> </apply> <ci> KFum_eq </ci> </apply> </apply> </apply> <ci> default </ci> </apply> </lambda> </math> </functionDefinition> <functionDefinition id='Function_for_vE_G6PDH' metaid='COPASI175' name='Function for vE_G6PDH'> <math xmlns='http://www.w3.org/1998/Math/MathML'> <lambda> <bvar> <ci> G6P </ci> </bvar> <bvar> <ci> KG6PDH_G6P </ci> </bvar> <bvar> <ci> KG6PDH_NADP </ci> </bvar> <bvar> <ci> KG6PDH_NADPH_g6pinh </ci> </bvar> <bvar> <ci> KG6PDH_NADPH_nadpinh </ci> </bvar> <bvar> <ci> NADP </ci> </bvar> <bvar> <ci> NADPH </ci> </bvar> <bvar> <ci> default </ci> </bvar> <bvar> <ci> vG6PDH_max </ci> </bvar> <apply> <divide/> <apply> <divide/> <apply> <times/> <ci> vG6PDH_max </ci> <ci> G6P </ci> <ci> NADP </ci> </apply> <apply> <times/> <apply> <plus/> <ci> G6P </ci> <ci> KG6PDH_G6P </ci> </apply> <apply> <plus/> <cn type='integer'> 1 </cn> <apply> <divide/> <ci> NADPH </ci> <ci> KG6PDH_NADPH_g6pinh </ci> </apply> </apply> <apply> <plus/> <apply> <times/> <ci> KG6PDH_NADP </ci> <apply> <plus/> <cn type='integer'> 1 </cn> <apply> <divide/> <ci> NADPH </ci> <ci> KG6PDH_NADPH_nadpinh </ci> </apply> </apply> </apply> <ci> NADP </ci> </apply> </apply> </apply> <ci> default </ci> </apply> </lambda> </math> </functionDefinition> <functionDefinition id='Function_for_vE_GAPDH' metaid='COPASI176' name='Function for vE_GAPDH'> <math xmlns='http://www.w3.org/1998/Math/MathML'> <lambda> <bvar> <ci> GAP </ci> </bvar> <bvar> <ci> GAPDH </ci> </bvar> <bvar> <ci> KGAPDH_GAP </ci> </bvar> <bvar> <ci> KGAPDH_NAD </ci> </bvar> <bvar> <ci> KGAPDH_NADH </ci> </bvar> <bvar> <ci> KGAPDH_PGP </ci> </bvar> <bvar> <ci> KGAPDH_eq </ci> </bvar> <bvar> <ci> NAD </ci> </bvar> <bvar> <ci> NADH </ci> </bvar> <bvar> <ci> PEP </ci> </bvar> <bvar> <ci> default </ci> </bvar> <bvar> <ci> kGAPDH_cat </ci> </bvar> <apply> <divide/> <apply> <divide/> <apply> <times/> <ci> GAPDH </ci> <ci> kGAPDH_cat </ci> <apply> <minus/> <apply> <times/> <ci> GAP </ci> <ci> NAD </ci> </apply> <apply> <divide/> <apply> <times/> <ci> PEP </ci> <ci> NADH </ci> </apply> <ci> KGAPDH_eq </ci> </apply> </apply> </apply> <apply> <times/> <apply> <plus/> <apply> <times/> <ci> KGAPDH_GAP </ci> <apply> <plus/> <cn type='integer'> 1 </cn> <apply> <divide/> <ci> PEP </ci> <ci> KGAPDH_PGP </ci> </apply> </apply> </apply> <ci> GAP </ci> </apply> <apply> <plus/> <apply> <times/> <ci> KGAPDH_NAD </ci> <apply> <plus/> <cn type='integer'> 1 </cn> <apply> <divide/> <ci> NADH </ci> <ci> KGAPDH_NADH </ci> </apply> </apply> </apply> <ci> NAD </ci> </apply> </apply> </apply> <ci> default </ci> </apply> </lambda> </math> </functionDefinition> <functionDefinition id='Function_for_vE_Glk' metaid='COPASI177' name='Function for vE_Glk'> <math xmlns='http://www.w3.org/1998/Math/MathML'> <lambda> <bvar> <ci> ATP </ci> </bvar> <bvar> <ci> G6P </ci> </bvar> <bvar> <ci> GLC </ci> </bvar> <bvar> <ci> Glk </ci> </bvar> <bvar> <ci> KGlk_ATP_m </ci> </bvar> <bvar> <ci> KGlk_G6P_i </ci> </bvar> <bvar> <ci> KGlk_GLC_m </ci> </bvar> <bvar> <ci> default </ci> </bvar> <bvar> <ci> kGlk_cat </ci> </bvar> <apply> <divide/> <apply> <divide/> <apply> <times/> <ci> Glk </ci> <ci> kGlk_cat </ci> <apply> <divide/> <ci> GLC </ci> <ci> KGlk_GLC_m </ci> </apply> <apply> <divide/> <ci> ATP </ci> <apply> <times/> <ci> KGlk_ATP_m </ci> <apply> <plus/> <cn type='integer'> 1 </cn> <apply> <divide/> <ci> G6P </ci> <ci> KGlk_G6P_i </ci> </apply> </apply> </apply> </apply> </apply> <apply> <plus/> <cn type='integer'> 1 </cn> <apply> <divide/> <ci> GLC </ci> <ci> KGlk_GLC_m </ci> </apply> <apply> <divide/> <ci> ATP </ci> <apply> <times/> <ci> KGlk_ATP_m </ci> <apply> <plus/> <cn type='integer'> 1 </cn> <apply> <divide/> <ci> G6P </ci> <ci> KGlk_G6P_i </ci> </apply> </apply> </apply> </apply> <apply> <divide/> <apply> <times/> <ci> GLC </ci> <ci> ATP </ci> </apply> <apply> <times/> <ci> KGlk_GLC_m </ci> <ci> KGlk_ATP_m </ci> <apply> <plus/> <cn type='integer'> 1 </cn> <apply> <divide/> <ci> G6P </ci> <ci> KGlk_G6P_i </ci> </apply> </apply> </apply> </apply> <apply> <divide/> <ci> G6P </ci> <ci> KGlk_G6P_i </ci> </apply> </apply> </apply> <ci> default </ci> </apply> </lambda> </math> </functionDefinition> <functionDefinition id='Function_for_vE_ICDH' metaid='COPASI178' name='Function for vE_ICDH'> <math xmlns='http://www.w3.org/1998/Math/MathML'> <lambda> <bvar> <ci> ICDH </ci> </bvar> <bvar> <ci> ICIT </ci> </bvar> <bvar> <ci> KICDH_ICIT </ci> </bvar> <bvar> <ci> KICDH_PEP </ci> </bvar> <bvar> <ci> LICDH </ci> </bvar> <bvar> <ci> PEP </ci> </bvar> <bvar> <ci> default </ci> </bvar> <bvar> <ci> kICDH_cat </ci> </bvar> <bvar> <ci> nICDH </ci> </bvar> <apply> <divide/> <apply> <divide/> <apply> <times/> <apply> <divide/> <apply> <times/> <ci> ICDH </ci> <ci> kICDH_cat </ci> <ci> ICIT </ci> </apply> <ci> KICDH_ICIT </ci> </apply> <apply> <power/> <apply> <plus/> <cn type='integer'> 1 </cn> <apply> <divide/> <ci> ICIT </ci> <ci> KICDH_ICIT </ci> </apply> </apply> <apply> <minus/> <ci> nICDH </ci> <cn type='integer'> 1 </cn> </apply> </apply> </apply> <apply> <plus/> <apply> <power/> <apply> <plus/> <cn type='integer'> 1 </cn> <apply> <divide/> <ci> ICIT </ci> <ci> KICDH_ICIT </ci> </apply> </apply> <ci> nICDH </ci> </apply> <apply> <times/> <ci> LICDH </ci> <apply> <power/> <apply> <plus/> <cn type='integer'> 1 </cn> <apply> <divide/> <ci> PEP </ci> <ci> KICDH_PEP </ci> </apply> </apply> <ci> nICDH </ci> </apply> </apply> </apply> </apply> <ci> default </ci> </apply> </lambda> </math> </functionDefinition> <functionDefinition id='Function_for_vBM_F6P' metaid='COPASI179' name='Function for vBM_F6P'> <math xmlns='http://www.w3.org/1998/Math/MathML'> <lambda> <bvar> <ci> F6P </ci> </bvar> <bvar> <ci> alphaACE </ci> </bvar> <bvar> <ci> alphaGLC </ci> </bvar> <bvar> <ci> default </ci> </bvar> <bvar> <ci> kBM_ACE_F6P </ci> </bvar> <bvar> <ci> kBM_GLC_F6P </ci> </bvar> <apply> <divide/> <apply> <times/> <apply> <plus/> <apply> <times/> <ci> alphaGLC </ci> <ci> kBM_GLC_F6P </ci> </apply> <apply> <times/> <ci> alphaACE </ci> <ci> kBM_ACE_F6P </ci> </apply> </apply> <ci> F6P </ci> </apply> <ci> default </ci> </apply> </lambda> </math> </functionDefinition> <functionDefinition id='Function_for_vE_Icl' metaid='COPASI180' name='Function for vE_Icl'> <math xmlns='http://www.w3.org/1998/Math/MathML'> <lambda> <bvar> <ci> GAP </ci> </bvar> <bvar> <ci> ICIT </ci> </bvar> <bvar> <ci> Icl </ci> </bvar> <bvar> <ci> KIcl_3PG </ci> </bvar> <bvar> <ci> KIcl_ICIT </ci> </bvar> <bvar> <ci> KIcl_PEP </ci> </bvar> <bvar> <ci> KIcl_aKG </ci> </bvar> <bvar> <ci> LIcl </ci> </bvar> <bvar> <ci> PEP </ci> </bvar> <bvar> <ci> aKG </ci> </bvar> <bvar> <ci> default </ci> </bvar> <bvar> <ci> kIcl_cat </ci> </bvar> <bvar> <ci> nIcl </ci> </bvar> <apply> <divide/> <apply> <divide/> <apply> <times/> <apply> <divide/> <apply> <times/> <ci> Icl </ci> <ci> kIcl_cat </ci> <ci> ICIT </ci> </apply> <ci> KIcl_ICIT </ci> </apply> <apply> <power/> <apply> <plus/> <cn type='integer'> 1 </cn> <apply> <divide/> <ci> ICIT </ci> <ci> KIcl_ICIT </ci> </apply> </apply> <apply> <minus/> <ci> nIcl </ci> <cn type='integer'> 1 </cn> </apply> </apply> </apply> <apply> <plus/> <apply> <power/> <apply> <plus/> <cn type='integer'> 1 </cn> <apply> <divide/> <ci> ICIT </ci> <ci> KIcl_ICIT </ci> </apply> </apply> <ci> nIcl </ci> </apply> <apply> <times/> <ci> LIcl </ci> <apply> <power/> <apply> <plus/> <cn type='integer'> 1 </cn> <apply> <divide/> <ci> PEP </ci> <ci> KIcl_PEP </ci> </apply> <apply> <divide/> <ci> GAP </ci> <ci> KIcl_3PG </ci> </apply> <apply> <divide/> <ci> aKG </ci> <ci> KIcl_aKG </ci> </apply> </apply> <ci> nIcl </ci> </apply> </apply> </apply> </apply> <ci> default </ci> </apply> </lambda> </math> </functionDefinition> <functionDefinition id='Function_for_vE_MDH' metaid='COPASI181' name='Function for vE_MDH'> <math xmlns='http://www.w3.org/1998/Math/MathML'> <lambda> <bvar> <ci> KMDH_MAL_I </ci> </bvar> <bvar> <ci> KMDH_MAL_m </ci> </bvar> <bvar> <ci> KMDH_NADH_I </ci> </bvar> <bvar> <ci> KMDH_NADH_m </ci> </bvar> <bvar> <ci> KMDH_NAD_I </ci> </bvar> <bvar> <ci> KMDH_NAD_II </ci> </bvar> <bvar> <ci> KMDH_NAD_m </ci> </bvar> <bvar> <ci> KMDH_OAA_I </ci> </bvar> <bvar> <ci> KMDH_OAA_II </ci> </bvar> <bvar> <ci> KMDH_OAA_m </ci> </bvar> <bvar> <ci> KMDH_eq </ci> </bvar> <bvar> <ci> MAL </ci> </bvar> <bvar> <ci> NAD </ci> </bvar> <bvar> <ci> NADH </ci> </bvar> <bvar> <ci> OAA </ci> </bvar> <bvar> <ci> default </ci> </bvar> <bvar> <ci> vMDH1_max </ci> </bvar> <bvar> <ci> vMDH2_max </ci> </bvar> <apply> <divide/> <apply> <divide/> <apply> <times/> <ci> vMDH1_max </ci> <ci> vMDH2_max </ci> <apply> <minus/> <apply> <times/> <ci> NAD </ci> <ci> MAL </ci> </apply> <apply> <divide/> <apply> <times/> <ci> NADH </ci> <ci> OAA </ci> </apply> <ci> KMDH_eq </ci> </apply> </apply> </apply> <apply> <plus/> <apply> <times/> <ci> KMDH_NAD_I </ci> <ci> KMDH_MAL_m </ci> <ci> vMDH2_max </ci> </apply> <apply> <times/> <ci> KMDH_MAL_m </ci> <ci> vMDH2_max </ci> <ci> NAD </ci> </apply> <apply> <times/> <ci> KMDH_NAD_m </ci> <ci> vMDH2_max </ci> <ci> MAL </ci> </apply> <apply> <times/> <ci> vMDH2_max </ci> <ci> NAD </ci> <ci> MAL </ci> </apply> <apply> <divide/> <apply> <times/> <ci> KMDH_OAA_m </ci> <ci> vMDH1_max </ci> <ci> NADH </ci> </apply> <ci> KMDH_eq </ci> </apply> <apply> <divide/> <apply> <times/> <ci> KMDH_NADH_m </ci> <ci> vMDH1_max </ci> <ci> OAA </ci> </apply> <ci> KMDH_eq </ci> </apply> <apply> <divide/> <apply> <times/> <ci> vMDH1_max </ci> <ci> NADH </ci> <ci> OAA </ci> </apply> <ci> KMDH_eq </ci> </apply> <apply> <divide/> <apply> <times/> <ci> vMDH1_max </ci> <ci> KMDH_OAA_m </ci> <ci> NAD </ci> <ci> NADH </ci> </apply> <apply> <times/> <ci> KMDH_eq </ci> <ci> KMDH_NAD_I </ci> </apply> </apply> <apply> <divide/> <apply> <times/> <ci> vMDH2_max </ci> <ci> KMDH_NAD_m </ci> <ci> MAL </ci> <ci> OAA </ci> </apply> <ci> KMDH_OAA_I </ci> </apply> <apply> <divide/> <apply> <times/> <ci> vMDH2_max </ci> <ci> NAD </ci> <ci> MAL </ci> <ci> NADH </ci> </apply> <ci> KMDH_NADH_I </ci> </apply> <apply> <divide/> <apply> <times/> <ci> vMDH1_max </ci> <ci> MAL </ci> <ci> NADH </ci> <ci> OAA </ci> </apply> <apply> <times/> <ci> KMDH_eq </ci> <ci> KMDH_MAL_I </ci> </apply> </apply> <apply> <divide/> <apply> <times/> <ci> vMDH2_max </ci> <ci> NAD </ci> <ci> MAL </ci> <ci> OAA </ci> </apply> <ci> KMDH_OAA_II </ci> </apply> <apply> <divide/> <apply> <times/> <ci> vMDH1_max </ci> <ci> NAD </ci> <ci> NADH </ci> <ci> OAA </ci> </apply> <apply> <times/> <ci> KMDH_NAD_II </ci> <ci> KMDH_eq </ci> </apply> </apply> <apply> <divide/> <apply> <times/> <ci> KMDH_NAD_I </ci> <ci> vMDH2_max </ci> <ci> NAD </ci> <ci> MAL </ci> <ci> NADH </ci> <ci> OAA </ci> </apply> <apply> <times/> <ci> KMDH_NAD_II </ci> <ci> KMDH_OAA_m </ci> <ci> KMDH_NADH_I </ci> </apply> </apply> </apply> </apply> <ci> default </ci> </apply> </lambda> </math> </functionDefinition> <functionDefinition id='Function_for_vE_MS' metaid='COPASI182' name='Function for vE_MS'> <math xmlns='http://www.w3.org/1998/Math/MathML'> <lambda> <bvar> <ci> AcCoA </ci> </bvar> <bvar> <ci> GOX </ci> </bvar> <bvar> <ci> KMS_AcCoA </ci> </bvar> <bvar> <ci> KMS_GOX </ci> </bvar> <bvar> <ci> KMS_GOX_AcCoA </ci> </bvar> <bvar> <ci> MS </ci> </bvar> <bvar> <ci> default </ci> </bvar> <bvar> <ci> kMS_cat </ci> </bvar> <apply> <divide/> <apply> <divide/> <apply> <times/> <ci> MS </ci> <ci> kMS_cat </ci> <ci> GOX </ci> <ci> AcCoA </ci> </apply> <apply> <plus/> <apply> <times/> <ci> KMS_GOX_AcCoA </ci> <ci> KMS_AcCoA </ci> </apply> <apply> <times/> <ci> KMS_AcCoA </ci> <ci> GOX </ci> </apply> <apply> <times/> <ci> KMS_GOX </ci> <ci> AcCoA </ci> </apply> <apply> <times/> <ci> GOX </ci> <ci> AcCoA </ci> </apply> </apply> </apply> <ci> default </ci> </apply> </lambda> </math> </functionDefinition> <functionDefinition id='Function_for_vE_Mez' metaid='COPASI183' name='Function for vE_Mez'> <math xmlns='http://www.w3.org/1998/Math/MathML'> <lambda> <bvar> <ci> AcCoA </ci> </bvar> <bvar> <ci> KMez_AcCoA </ci> </bvar> <bvar> <ci> KMez_MAL </ci> </bvar> <bvar> <ci> KMez_cAMP </ci> </bvar> <bvar> <ci> LMez </ci> </bvar> <bvar> <ci> MAL </ci> </bvar> <bvar> <ci> Mez </ci> </bvar> <bvar> <ci> cAMP </ci> </bvar> <bvar> <ci> default </ci> </bvar> <bvar> <ci> kMez_cat </ci> </bvar> <bvar> <ci> nMez </ci> </bvar> <apply> <divide/> <apply> <divide/> <apply> <times/> <apply> <divide/> <apply> <times/> <ci> Mez </ci> <ci> kMez_cat </ci> <ci> MAL </ci> </apply> <ci> KMez_MAL </ci> </apply> <apply> <power/> <apply> <plus/> <cn type='integer'> 1 </cn> <apply> <divide/> <ci> MAL </ci> <ci> KMez_MAL </ci> </apply> </apply> <apply> <minus/> <ci> nMez </ci> <cn type='integer'> 1 </cn> </apply> </apply> </apply> <apply> <plus/> <apply> <power/> <apply> <plus/> <cn type='integer'> 1 </cn> <apply> <divide/> <ci> MAL </ci> <ci> KMez_MAL </ci> </apply> </apply> <ci> nMez </ci> </apply> <apply> <times/> <ci> LMez </ci> <apply> <power/> <apply> <plus/> <cn type='integer'> 1 </cn> <apply> <divide/> <ci> AcCoA </ci> <ci> KMez_AcCoA </ci> </apply> <apply> <divide/> <ci> cAMP </ci> <ci> KMez_cAMP </ci> </apply> </apply> <ci> nMez </ci> </apply> </apply> </apply> </apply> <ci> default </ci> </apply> </lambda> </math> </functionDefinition> <functionDefinition id='Function_for_vE_PDH' metaid='COPASI184' name='Function for vE_PDH'> <math xmlns='http://www.w3.org/1998/Math/MathML'> <lambda> <bvar> <ci> AcCoA </ci> </bvar> <bvar> <ci> CoA </ci> </bvar> <bvar> <ci> KPDH_AcCoA_m </ci> </bvar> <bvar> <ci> KPDH_CoA_m </ci> </bvar> <bvar> <ci> KPDH_NADH_m </ci> </bvar> <bvar> <ci> KPDH_NAD_m </ci> </bvar> <bvar> <ci> KPDH_PYR_m </ci> </bvar> <bvar> <ci> KPDH_i </ci> </bvar> <bvar> <ci> NAD </ci> </bvar> <bvar> <ci> NADH </ci> </bvar> <bvar> <ci> PDH </ci> </bvar> <bvar> <ci> PYR </ci> </bvar> <bvar> <ci> default </ci> </bvar> <bvar> <ci> kPDH_cat </ci> </bvar> <apply> <divide/> <apply> <divide/> <apply> <times/> <ci> PDH </ci> <ci> kPDH_cat </ci> <apply> <divide/> <cn type='integer'> 1 </cn> <apply> <plus/> <cn type='integer'> 1 </cn> <apply> <divide/> <apply> <times/> <ci> KPDH_i </ci> <ci> NADH </ci> </apply> <ci> NAD </ci> </apply> </apply> </apply> <apply> <divide/> <ci> PYR </ci> <ci> KPDH_PYR_m </ci> </apply> <apply> <divide/> <ci> NAD </ci> <ci> KPDH_NAD_m </ci> </apply> <apply> <divide/> <ci> CoA </ci> <ci> KPDH_CoA_m </ci> </apply> </apply> <apply> <times/> <apply> <plus/> <cn type='integer'> 1 </cn> <apply> <divide/> <ci> PYR </ci> <ci> KPDH_PYR_m </ci> </apply> </apply> <apply> <plus/> <cn type='integer'> 1 </cn> <apply> <divide/> <ci> NAD </ci> <ci> KPDH_NAD_m </ci> </apply> <apply> <divide/> <ci> NADH </ci> <ci> KPDH_NADH_m </ci> </apply> </apply> <apply> <plus/> <cn type='integer'> 1 </cn> <apply> <divide/> <ci> CoA </ci> <ci> KPDH_CoA_m </ci> </apply> <apply> <divide/> <ci> AcCoA </ci> <ci> KPDH_AcCoA_m </ci> </apply> </apply> </apply> </apply> <ci> default </ci> </apply> </lambda> </math> </functionDefinition> <functionDefinition id='Function_for_vD_OAA' metaid='COPASI185' name='Function for vD_OAA'> <math xmlns='http://www.w3.org/1998/Math/MathML'> <lambda> <bvar> <ci> OAA </ci> </bvar> <bvar> <ci> default </ci> </bvar> <bvar> <ci> mu </ci> </bvar> <apply> <divide/> <apply> <times/> <ci> mu </ci> <ci> OAA </ci> </apply> <ci> default </ci> </apply> </lambda> </math> </functionDefinition> <functionDefinition id='Function_for_vD_PDH' metaid='COPASI186' name='Function for vD_PDH'> <math xmlns='http://www.w3.org/1998/Math/MathML'> <lambda> <bvar> <ci> PDH </ci> </bvar> <bvar> <ci> default </ci> </bvar> <bvar> <ci> kdegr </ci> </bvar> <bvar> <ci> mu </ci> </bvar> <apply> <divide/> <apply> <times/> <apply> <plus/> <ci> mu </ci> <ci> kdegr </ci> </apply> <ci> PDH </ci> </apply> <ci> default </ci> </apply> </lambda> </math> </functionDefinition> <functionDefinition id='Function_for_vD_PEP' metaid='COPASI187' name='Function for vD_PEP'> <math xmlns='http://www.w3.org/1998/Math/MathML'> <lambda> <bvar> <ci> PEP </ci> </bvar> <bvar> <ci> default </ci> </bvar> <bvar> <ci> mu </ci> </bvar> <apply> <divide/> <apply> <times/> <ci> mu </ci> <ci> PEP </ci> </apply> <ci> default </ci> </apply> </lambda> </math> </functionDefinition> <functionDefinition id='Function_for_vD_PYR' metaid='COPASI188' name='Function for vD_PYR'> <math xmlns='http://www.w3.org/1998/Math/MathML'> <lambda> <bvar> <ci> PYR </ci> </bvar> <bvar> <ci> default </ci> </bvar> <bvar> <ci> mu </ci> </bvar> <apply> <divide/> <apply> <times/> <ci> mu </ci> <ci> PYR </ci> </apply> <ci> default </ci> </apply> </lambda> </math> </functionDefinition> <functionDefinition id='Function_for_vD_Pck' metaid='COPASI189' name='Function for vD_Pck'> <math xmlns='http://www.w3.org/1998/Math/MathML'> <lambda> <bvar> <ci> Pck </ci> </bvar> <bvar> <ci> default </ci> </bvar> <bvar> <ci> kdegr </ci> </bvar> <bvar> <ci> mu </ci> </bvar> <apply> <divide/> <apply> <times/> <apply> <plus/> <ci> mu </ci> <ci> kdegr </ci> </apply> <ci> Pck </ci> </apply> <ci> default </ci> </apply> </lambda> </math> </functionDefinition> <functionDefinition id='Function_for_vD_Pfk' metaid='COPASI190' name='Function for vD_Pfk'> <math xmlns='http://www.w3.org/1998/Math/MathML'> <lambda> <bvar> <ci> Pfk </ci> </bvar> <bvar> <ci> default </ci> </bvar> <bvar> <ci> kdegr </ci> </bvar> <bvar> <ci> mu </ci> </bvar> <apply> <divide/> <apply> <times/> <apply> <plus/> <ci> mu </ci> <ci> kdegr </ci> </apply> <ci> Pfk </ci> </apply> <ci> default </ci> </apply> </lambda> </math> </functionDefinition> <functionDefinition id='Function_for_vD_Ppc' metaid='COPASI191' name='Function for vD_Ppc'> <math xmlns='http://www.w3.org/1998/Math/MathML'> <lambda> <bvar> <ci> Ppc </ci> </bvar> <bvar> <ci> default </ci> </bvar> <bvar> <ci> kdegr </ci> </bvar> <bvar> <ci> mu </ci> </bvar> <apply> <divide/> <apply> <times/> <apply> <plus/> <ci> mu </ci> <ci> kdegr </ci> </apply> <ci> Ppc </ci> </apply> <ci> default </ci> </apply> </lambda> </math> </functionDefinition> <functionDefinition id='Function_for_vD_Pps' metaid='COPASI192' name='Function for vD_Pps'> <math xmlns='http://www.w3.org/1998/Math/MathML'> <lambda> <bvar> <ci> Pps </ci> </bvar> <bvar> <ci> default </ci> </bvar> <bvar> <ci> kdegr </ci> </bvar> <bvar> <ci> mu </ci> </bvar> <apply> <divide/> <apply> <times/> <apply> <plus/> <ci> mu </ci> <ci> kdegr </ci> </apply> <ci> Pps </ci> </apply> <ci> default </ci> </apply> </lambda> </math> </functionDefinition> <functionDefinition id='Function_for_vD_Pyk' metaid='COPASI193' name='Function for vD_Pyk'> <math xmlns='http://www.w3.org/1998/Math/MathML'> <lambda> <bvar> <ci> Pyk </ci> </bvar> <bvar> <ci> default </ci> </bvar> <bvar> <ci> kdegr </ci> </bvar> <bvar> <ci> mu </ci> </bvar> <apply> <divide/> <apply> <times/> <apply> <plus/> <ci> mu </ci> <ci> kdegr </ci> </apply> <ci> Pyk </ci> </apply> <ci> default </ci> </apply> </lambda> </math> </functionDefinition> <functionDefinition id='Function_for_vD_R5P' metaid='COPASI194' name='Function for vD_R5P'> <math xmlns='http://www.w3.org/1998/Math/MathML'> <lambda> <bvar> <ci> R5P </ci> </bvar> <bvar> <ci> default </ci> </bvar> <bvar> <ci> mu </ci> </bvar> <apply> <divide/> <apply> <times/> <ci> mu </ci> <ci> R5P </ci> </apply> <ci> default </ci> </apply> </lambda> </math> </functionDefinition> <functionDefinition id='Function_for_vD_RU5P' metaid='COPASI195' name='Function for vD_RU5P'> <math xmlns='http://www.w3.org/1998/Math/MathML'> <lambda> <bvar> <ci> RU5P </ci> </bvar> <bvar> <ci> default </ci> </bvar> <bvar> <ci> mu </ci> </bvar> <apply> <divide/> <apply> <times/> <ci> mu </ci> <ci> RU5P </ci> </apply> <ci> default </ci> </apply> </lambda> </math> </functionDefinition> <functionDefinition id='Function_for_vD_S7P' metaid='COPASI196' name='Function for vD_S7P'> <math xmlns='http://www.w3.org/1998/Math/MathML'> <lambda> <bvar> <ci> S7P </ci> </bvar> <bvar> <ci> default </ci> </bvar> <bvar> <ci> mu </ci> </bvar> <apply> <divide/> <apply> <times/> <ci> mu </ci> <ci> S7P </ci> </apply> <ci> default </ci> </apply> </lambda> </math> </functionDefinition> <functionDefinition id='Function_for_vD_SDH' metaid='COPASI197' name='Function for vD_SDH'> <math xmlns='http://www.w3.org/1998/Math/MathML'> <lambda> <bvar> <ci> SDH </ci> </bvar> <bvar> <ci> default </ci> </bvar> <bvar> <ci> kdegr </ci> </bvar> <bvar> <ci> mu </ci> </bvar> <apply> <divide/> <apply> <times/> <apply> <plus/> <ci> mu </ci> <ci> kdegr </ci> </apply> <ci> SDH </ci> </apply> <ci> default </ci> </apply> </lambda> </math> </functionDefinition> <functionDefinition id='Function_for_vD_SUC' metaid='COPASI198' name='Function for vD_SUC'> <math xmlns='http://www.w3.org/1998/Math/MathML'> <lambda> <bvar> <ci> SUC </ci> </bvar> <bvar> <ci> default </ci> </bvar> <bvar> <ci> mu </ci> </bvar> <apply> <divide/> <apply> <times/> <ci> mu </ci> <ci> SUC </ci> </apply> <ci> default </ci> </apply> </lambda> </math> </functionDefinition> <functionDefinition id='Function_for_vD_X' metaid='COPASI199' name='Function for vD_X'> <math xmlns='http://www.w3.org/1998/Math/MathML'> <lambda> <bvar> <ci> D </ci> </bvar> <bvar> <ci> X </ci> </bvar> <bvar> <ci> default </ci> </bvar> <apply> <divide/> <apply> <times/> <ci> D </ci> <ci> X </ci> </apply> <ci> default </ci> </apply> </lambda> </math> </functionDefinition> <functionDefinition id='Function_for_vD_X5P' metaid='COPASI200' name='Function for vD_X5P'> <math xmlns='http://www.w3.org/1998/Math/MathML'> <lambda> <bvar> <ci> X5P </ci> </bvar> <bvar> <ci> default </ci> </bvar> <bvar> <ci> mu </ci> </bvar> <apply> <divide/> <apply> <times/> <ci> mu </ci> <ci> X5P </ci> </apply> <ci> default </ci> </apply> </lambda> </math> </functionDefinition> <functionDefinition id='Function_for_vD_aKG' metaid='COPASI201' name='Function for vD_aKG'> <math xmlns='http://www.w3.org/1998/Math/MathML'> <lambda> <bvar> <ci> aKG </ci> </bvar> <bvar> <ci> default </ci> </bvar> <bvar> <ci> mu </ci> </bvar> <apply> <divide/> <apply> <times/> <ci> mu </ci> <ci> aKG </ci> </apply> <ci> default </ci> </apply> </lambda> </math> </functionDefinition> <functionDefinition id='Function_for_vD_aKGDH' metaid='COPASI202' name='Function for vD_aKGDH'> <math xmlns='http://www.w3.org/1998/Math/MathML'> <lambda> <bvar> <ci> aKGDH </ci> </bvar> <bvar> <ci> default </ci> </bvar> <bvar> <ci> kdegr </ci> </bvar> <bvar> <ci> mu </ci> </bvar> <apply> <divide/> <apply> <times/> <apply> <plus/> <ci> mu </ci> <ci> kdegr </ci> </apply> <ci> aKGDH </ci> </apply> <ci> default </ci> </apply> </lambda> </math> </functionDefinition> <functionDefinition id='Function_for_vD_cAMP' metaid='COPASI203' name='Function for vD_cAMP'> <math xmlns='http://www.w3.org/1998/Math/MathML'> <lambda> <bvar> <ci> cAMP </ci> </bvar> <bvar> <ci> default </ci> </bvar> <bvar> <ci> mu </ci> </bvar> <apply> <divide/> <apply> <times/> <ci> mu </ci> <ci> cAMP </ci> </apply> <ci> default </ci> </apply> </lambda> </math> </functionDefinition> <functionDefinition id='Function_for_vE_6PGDH' metaid='COPASI204' name='Function for vE_6PGDH'> <math xmlns='http://www.w3.org/1998/Math/MathML'> <lambda> <bvar> <ci> ATP </ci> </bvar> <bvar> <ci> K6PGDH_6PG </ci> </bvar> <bvar> <ci> K6PGDH_ATP_inh </ci> </bvar> <bvar> <ci> K6PGDH_NADP </ci> </bvar> <bvar> <ci> K6PGDH_NADPH_inh </ci> </bvar> <bvar> <ci> NADP </ci> </bvar> <bvar> <ci> NADPH </ci> </bvar> <bvar> <ci> default </ci> </bvar> <bvar> <ci> sixPG </ci> </bvar> <bvar> <ci> v6PGDH_max </ci> </bvar> <apply> <divide/> <apply> <divide/> <apply> <times/> <ci> v6PGDH_max </ci> <ci> sixPG </ci> <ci> NADP </ci> </apply> <apply> <times/> <apply> <plus/> <ci> sixPG </ci> <ci> K6PGDH_6PG </ci> </apply> <apply> <plus/> <ci> NADP </ci> <apply> <times/> <ci> K6PGDH_NADP </ci> <apply> <plus/> <cn type='integer'> 1 </cn> <apply> <divide/> <ci> NADPH </ci> <ci> K6PGDH_NADPH_inh </ci> </apply> </apply> <apply> <plus/> <cn type='integer'> 1 </cn> <apply> <divide/> <ci> ATP </ci> <ci> K6PGDH_ATP_inh </ci> </apply> </apply> </apply> </apply> </apply> </apply> <ci> default </ci> </apply> </lambda> </math> </functionDefinition> <functionDefinition id='Function_for_vE_AceKki' metaid='COPASI205' name='Function for vE_AceKki'> <math xmlns='http://www.w3.org/1998/Math/MathML'> <lambda> <bvar> <ci> AceK </ci> </bvar> <bvar> <ci> GAP </ci> </bvar> <bvar> <ci> GOX </ci> </bvar> <bvar> <ci> ICDH </ci> </bvar> <bvar> <ci> ICIT </ci> </bvar> <bvar> <ci> KAceK_3PG </ci> </bvar> <bvar> <ci> KAceK_GOX </ci> </bvar> <bvar> <ci> KAceK_ICDH </ci> </bvar> <bvar> <ci> KAceK_ICIT </ci> </bvar> <bvar> <ci> KAceK_OAA </ci> </bvar> <bvar> <ci> KAceK_PEP </ci> </bvar> <bvar> <ci> KAceK_PYR </ci> </bvar> <bvar> <ci> KAceK_aKG </ci> </bvar> <bvar> <ci> LAceK </ci> </bvar> <bvar> <ci> OAA </ci> </bvar> <bvar> <ci> PEP </ci> </bvar> <bvar> <ci> PYR </ci> </bvar> <bvar> <ci> aKG </ci> </bvar> <bvar> <ci> default </ci> </bvar> <bvar> <ci> kAceKki_cat </ci> </bvar> <bvar> <ci> nAceK </ci> </bvar> <apply> <divide/> <apply> <divide/> <apply> <times/> <apply> <divide/> <apply> <times/> <ci> AceK </ci> <ci> kAceKki_cat </ci> <ci> ICDH </ci> </apply> <ci> KAceK_ICDH </ci> </apply> <apply> <power/> <apply> <plus/> <cn type='integer'> 1 </cn> <apply> <divide/> <ci> ICDH </ci> <ci> KAceK_ICDH </ci> </apply> </apply> <apply> <minus/> <ci> nAceK </ci> <cn type='integer'> 1 </cn> </apply> </apply> </apply> <apply> <plus/> <apply> <power/> <apply> <plus/> <cn type='integer'> 1 </cn> <apply> <divide/> <ci> ICDH </ci> <ci> KAceK_ICDH </ci> </apply> </apply> <ci> nAceK </ci> </apply> <apply> <times/> <ci> LAceK </ci> <apply> <power/> <apply> <plus/> <cn type='integer'> 1 </cn> <apply> <divide/> <ci> ICIT </ci> <ci> KAceK_ICIT </ci> </apply> <apply> <divide/> <ci> GOX </ci> <ci> KAceK_GOX </ci> </apply> <apply> <divide/> <ci> OAA </ci> <ci> KAceK_OAA </ci> </apply> <apply> <divide/> <ci> aKG </ci> <ci> KAceK_aKG </ci> </apply> <apply> <divide/> <ci> PEP </ci> <ci> KAceK_PEP </ci> </apply> <apply> <divide/> <ci> GAP </ci> <ci> KAceK_3PG </ci> </apply> <apply> <divide/> <ci> PYR </ci> <ci> KAceK_PYR </ci> </apply> </apply> <ci> nAceK </ci> </apply> </apply> </apply> </apply> <ci> default </ci> </apply> </lambda> </math> </functionDefinition> <functionDefinition id='Function_for_vE_AceKph' metaid='COPASI206' name='Function for vE_AceKph'> <math xmlns='http://www.w3.org/1998/Math/MathML'> <lambda> <bvar> <ci> AceK </ci> </bvar> <bvar> <ci> GAP </ci> </bvar> <bvar> <ci> ICDHP </ci> </bvar> <bvar> <ci> KAceK_3PG </ci> </bvar> <bvar> <ci> KAceK_ICDHP </ci> </bvar> <bvar> <ci> KAceK_OAA </ci> </bvar> <bvar> <ci> KAceK_PEP </ci> </bvar> <bvar> <ci> KAceK_PYR </ci> </bvar> <bvar> <ci> KAceK_aKG </ci> </bvar> <bvar> <ci> LAceK </ci> </bvar> <bvar> <ci> OAA </ci> </bvar> <bvar> <ci> PEP </ci> </bvar> <bvar> <ci> PYR </ci> </bvar> <bvar> <ci> aKG </ci> </bvar> <bvar> <ci> default </ci> </bvar> <bvar> <ci> kAceKph_cat </ci> </bvar> <bvar> <ci> nAceK </ci> </bvar> <apply> <divide/> <apply> <divide/> <apply> <times/> <apply> <divide/> <apply> <times/> <ci> AceK </ci> <ci> kAceKph_cat </ci> <ci> ICDHP </ci> </apply> <ci> KAceK_ICDHP </ci> </apply> <apply> <power/> <apply> <plus/> <cn type='integer'> 1 </cn> <apply> <divide/> <ci> ICDHP </ci> <ci> KAceK_ICDHP </ci> </apply> </apply> <apply> <minus/> <ci> nAceK </ci> <cn type='integer'> 1 </cn> </apply> </apply> </apply> <apply> <plus/> <apply> <power/> <apply> <plus/> <cn type='integer'> 1 </cn> <apply> <divide/> <ci> ICDHP </ci> <ci> KAceK_ICDHP </ci> </apply> </apply> <ci> nAceK </ci> </apply> <apply> <divide/> <ci> LAceK </ci> <apply> <power/> <apply> <plus/> <cn type='integer'> 1 </cn> <apply> <divide/> <ci> OAA </ci> <ci> KAceK_OAA </ci> </apply> <apply> <divide/> <ci> aKG </ci> <ci> KAceK_aKG </ci> </apply> <apply> <divide/> <ci> PEP </ci> <ci> KAceK_PEP </ci> </apply> <apply> <divide/> <ci> GAP </ci> <ci> KAceK_3PG </ci> </apply> <apply> <divide/> <ci> PYR </ci> <ci> KAceK_PYR </ci> </apply> </apply> <ci> nAceK </ci> </apply> </apply> </apply> </apply> <ci> default </ci> </apply> </lambda> </math> </functionDefinition> <functionDefinition id='Function_for_vE_Ack' metaid='COPASI207' name='Function for vE_Ack'> <math xmlns='http://www.w3.org/1998/Math/MathML'> <lambda> <bvar> <ci> ACEex </ci> </bvar> <bvar> <ci> ADP </ci> </bvar> <bvar> <ci> ATP </ci> </bvar> <bvar> <ci> AcP </ci> </bvar> <bvar> <ci> KAck_ACE_m </ci> </bvar> <bvar> <ci> KAck_ADP_m </ci> </bvar> <bvar> <ci> KAck_ATP_m </ci> </bvar> <bvar> <ci> KAck_AcP_m </ci> </bvar> <bvar> <ci> KAck_eq </ci> </bvar> <bvar> <ci> default </ci> </bvar> <bvar> <ci> vAck_max </ci> </bvar> <apply> <divide/> <apply> <divide/> <apply> <times/> <ci> vAck_max </ci> <apply> <divide/> <cn type='integer'> 1 </cn> <apply> <times/> <ci> KAck_ADP_m </ci> <ci> KAck_AcP_m </ci> </apply> </apply> <apply> <minus/> <apply> <times/> <ci> AcP </ci> <ci> ADP </ci> </apply> <apply> <divide/> <apply> <times/> <ci> ACEex </ci> <ci> ATP </ci> </apply> <ci> KAck_eq </ci> </apply> </apply> </apply> <apply> <times/> <apply> <plus/> <cn type='integer'> 1 </cn> <apply> <divide/> <ci> AcP </ci> <ci> KAck_AcP_m </ci> </apply> <apply> <divide/> <ci> ACEex </ci> <ci> KAck_ACE_m </ci> </apply> </apply> <apply> <plus/> <cn type='integer'> 1 </cn> <apply> <divide/> <ci> ADP </ci> <ci> KAck_ADP_m </ci> </apply> <apply> <divide/> <ci> ATP </ci> <ci> KAck_ATP_m </ci> </apply> </apply> </apply> </apply> <ci> default </ci> </apply> </lambda> </math> </functionDefinition> <functionDefinition id='Function_for_vE_Ack_medium' metaid='COPASI208' name='Function for vE_Ack_medium'> <math xmlns='http://www.w3.org/1998/Math/MathML'> <lambda> <bvar> <ci> ACEex </ci> </bvar> <bvar> <ci> ADP </ci> </bvar> <bvar> <ci> ATP </ci> </bvar> <bvar> <ci> AcP </ci> </bvar> <bvar> <ci> KAck_ACE_m </ci> </bvar> <bvar> <ci> KAck_ADP_m </ci> </bvar> <bvar> <ci> KAck_ATP_m </ci> </bvar> <bvar> <ci> KAck_AcP_m </ci> </bvar> <bvar> <ci> KAck_eq </ci> </bvar> <bvar> <ci> X </ci> </bvar> <bvar> <ci> default </ci> </bvar> <bvar> <ci> rho </ci> </bvar> <bvar> <ci> vAck_max </ci> </bvar> <apply> <divide/> <apply> <divide/> <apply> <times/> <apply> <divide/> <apply> <times/> <ci> vAck_max </ci> <apply> <divide/> <cn type='integer'> 1 </cn> <apply> <times/> <ci> KAck_ADP_m </ci> <ci> KAck_AcP_m </ci> </apply> </apply> <apply> <minus/> <apply> <times/> <ci> AcP </ci> <ci> ADP </ci> </apply> <apply> <divide/> <apply> <times/> <ci> ACEex </ci> <ci> ATP </ci> </apply> <ci> KAck_eq </ci> </apply> </apply> </apply> <apply> <times/> <apply> <plus/> <cn type='integer'> 1 </cn> <apply> <divide/> <ci> AcP </ci> <ci> KAck_AcP_m </ci> </apply> <apply> <divide/> <ci> ACEex </ci> <ci> KAck_ACE_m </ci> </apply> </apply> <apply> <plus/> <cn type='integer'> 1 </cn> <apply> <divide/> <ci> ADP </ci> <ci> KAck_ADP_m </ci> </apply> <apply> <divide/> <ci> ATP </ci> <ci> KAck_ATP_m </ci> </apply> </apply> </apply> </apply> <ci> X </ci> </apply> <ci> rho </ci> </apply> <ci> default </ci> </apply> </lambda> </math> </functionDefinition> <functionDefinition id='Function_for_vE_Ppc' metaid='COPASI209' name='Function for vE_Ppc'> <math xmlns='http://www.w3.org/1998/Math/MathML'> <lambda> <bvar> <ci> FBP </ci> </bvar> <bvar> <ci> KPpc_FBP </ci> </bvar> <bvar> <ci> KPpc_PEP </ci> </bvar> <bvar> <ci> LPpc </ci> </bvar> <bvar> <ci> PEP </ci> </bvar> <bvar> <ci> Ppc </ci> </bvar> <bvar> <ci> default </ci> </bvar> <bvar> <ci> kPpc_cat </ci> </bvar> <bvar> <ci> nPpc </ci> </bvar> <apply> <divide/> <apply> <divide/> <apply> <times/> <apply> <divide/> <apply> <times/> <ci> Ppc </ci> <ci> kPpc_cat </ci> <ci> PEP </ci> </apply> <ci> KPpc_PEP </ci> </apply> <apply> <power/> <apply> <plus/> <cn type='integer'> 1 </cn> <apply> <divide/> <ci> PEP </ci> <ci> KPpc_PEP </ci> </apply> </apply> <apply> <minus/> <ci> nPpc </ci> <cn type='integer'> 1 </cn> </apply> </apply> </apply> <apply> <plus/> <apply> <power/> <apply> <plus/> <cn type='integer'> 1 </cn> <apply> <divide/> <ci> PEP </ci> <ci> KPpc_PEP </ci> </apply> </apply> <ci> nPpc </ci> </apply> <apply> <divide/> <ci> LPpc </ci> <apply> <power/> <apply> <plus/> <cn type='integer'> 1 </cn> <apply> <divide/> <ci> FBP </ci> <ci> KPpc_FBP </ci> </apply> </apply> <ci> nPpc </ci> </apply> </apply> </apply> </apply> <ci> default </ci> </apply> </lambda> </math> </functionDefinition> <functionDefinition id='Function_for_vE_Acs' metaid='COPASI210' name='Function for vE_Acs'> <math xmlns='http://www.w3.org/1998/Math/MathML'> <lambda> <bvar> <ci> ACEex </ci> </bvar> <bvar> <ci> Acs </ci> </bvar> <bvar> <ci> KAcs_ACE </ci> </bvar> <bvar> <ci> default </ci> </bvar> <bvar> <ci> kAcs_cat </ci> </bvar> <apply> <divide/> <apply> <divide/> <apply> <times/> <ci> Acs </ci> <ci> kAcs_cat </ci> <ci> ACEex </ci> </apply> <apply> <plus/> <ci> ACEex </ci> <ci> KAcs_ACE </ci> </apply> </apply> <ci> default </ci> </apply> </lambda> </math> </functionDefinition> <functionDefinition id='Function_for_vE_Acs_medium' metaid='COPASI211' name='Function for vE_Acs_medium'> <math xmlns='http://www.w3.org/1998/Math/MathML'> <lambda> <bvar> <ci> ACEex </ci> </bvar> <bvar> <ci> Acs </ci> </bvar> <bvar> <ci> KAcs_ACE </ci> </bvar> <bvar> <ci> X </ci> </bvar> <bvar> <ci> default </ci> </bvar> <bvar> <ci> kAcs_cat </ci> </bvar> <bvar> <ci> rho </ci> </bvar> <apply> <divide/> <apply> <divide/> <apply> <times/> <apply> <divide/> <apply> <times/> <ci> Acs </ci> <ci> kAcs_cat </ci> <ci> ACEex </ci> </apply> <apply> <plus/> <ci> ACEex </ci> <ci> KAcs_ACE </ci> </apply> </apply> <ci> X </ci> </apply> <ci> rho </ci> </apply> <ci> default </ci> </apply> </lambda> </math> </functionDefinition> <functionDefinition id='Function_for_vE_CS' metaid='COPASI212' name='Function for vE_CS'> <math xmlns='http://www.w3.org/1998/Math/MathML'> <lambda> <bvar> <ci> AcCoA </ci> </bvar> <bvar> <ci> CS </ci> </bvar> <bvar> <ci> KCS_AcCoA </ci> </bvar> <bvar> <ci> KCS_OAA </ci> </bvar> <bvar> <ci> KCS_OAA_AcCoA </ci> </bvar> <bvar> <ci> KCS_aKG </ci> </bvar> <bvar> <ci> OAA </ci> </bvar> <bvar> <ci> aKG </ci> </bvar> <bvar> <ci> default </ci> </bvar> <bvar> <ci> kCS_cat </ci> </bvar> <apply> <divide/> <apply> <divide/> <apply> <times/> <ci> CS </ci> <ci> kCS_cat </ci> <ci> OAA </ci> <ci> AcCoA </ci> </apply> <apply> <plus/> <apply> <times/> <apply> <plus/> <cn type='integer'> 1 </cn> <apply> <divide/> <ci> aKG </ci> <ci> KCS_aKG </ci> </apply> </apply> <ci> KCS_OAA_AcCoA </ci> <ci> KCS_AcCoA </ci> </apply> <apply> <times/> <ci> KCS_AcCoA </ci> <ci> OAA </ci> </apply> <apply> <times/> <apply> <plus/> <cn type='integer'> 1 </cn> <apply> <divide/> <ci> aKG </ci> <ci> KCS_aKG </ci> </apply> </apply> <ci> KCS_OAA </ci> <ci> AcCoA </ci> </apply> <apply> <times/> <ci> OAA </ci> <ci> AcCoA </ci> </apply> </apply> </apply> <ci> default </ci> </apply> </lambda> </math> </functionDefinition> <functionDefinition id='Function_for_vE_Cya' metaid='COPASI213' name='Function for vE_Cya'> <math xmlns='http://www.w3.org/1998/Math/MathML'> <lambda> <bvar> <ci> EIIAP </ci> </bvar> <bvar> <ci> KCya_EIIAP </ci> </bvar> <bvar> <ci> default </ci> </bvar> <bvar> <ci> vCya_max </ci> </bvar> <apply> <divide/> <apply> <divide/> <apply> <times/> <ci> vCya_max </ci> <ci> EIIAP </ci> </apply> <apply> <plus/> <ci> EIIAP </ci> <ci> KCya_EIIAP </ci> </apply> </apply> <ci> default </ci> </apply> </lambda> </math> </functionDefinition> <functionDefinition id='Function_for_vE_Eda' metaid='COPASI214' name='Function for vE_Eda'> <math xmlns='http://www.w3.org/1998/Math/MathML'> <lambda> <bvar> <ci> GAP </ci> </bvar> <bvar> <ci> KDPG </ci> </bvar> <bvar> <ci> KEda_GAP_m </ci> </bvar> <bvar> <ci> KEda_KDPG_m </ci> </bvar> <bvar> <ci> KEda_PYR_m </ci> </bvar> <bvar> <ci> KEda_eq </ci> </bvar> <bvar> <ci> PYR </ci> </bvar> <bvar> <ci> QEda_pH </ci> </bvar> <bvar> <ci> default </ci> </bvar> <bvar> <ci> vEda_max </ci> </bvar> <apply> <divide/> <apply> <divide/> <apply> <times/> <ci> vEda_max </ci> <ci> QEda_pH </ci> <apply> <minus/> <ci> KDPG </ci> <apply> <divide/> <apply> <times/> <ci> GAP </ci> <ci> PYR </ci> </apply> <ci> KEda_eq </ci> </apply> </apply> </apply> <apply> <plus/> <ci> KEda_KDPG_m </ci> <ci> KDPG </ci> <apply> <times/> <ci> KEda_KDPG_m </ci> <apply> <plus/> <apply> <divide/> <ci> PYR </ci> <ci> KEda_PYR_m </ci> </apply> <apply> <divide/> <ci> GAP </ci> <ci> KEda_GAP_m </ci> </apply> <apply> <divide/> <apply> <times/> <ci> PYR </ci> <ci> GAP </ci> </apply> <apply> <times/> <ci> KEda_PYR_m </ci> <ci> KEda_GAP_m </ci> </apply> </apply> </apply> </apply> </apply> </apply> <ci> default </ci> </apply> </lambda> </math> </functionDefinition> <functionDefinition id='Function_for_vE_Edd' metaid='COPASI215' name='Function for vE_Edd'> <math xmlns='http://www.w3.org/1998/Math/MathML'> <lambda> <bvar> <ci> KDPG </ci> </bvar> <bvar> <ci> KEdd_6PG_m </ci> </bvar> <bvar> <ci> KEdd_KDPG_m </ci> </bvar> <bvar> <ci> KEdd_eq </ci> </bvar> <bvar> <ci> QEdd_pH </ci> </bvar> <bvar> <ci> default </ci> </bvar> <bvar> <ci> sixPG </ci> </bvar> <bvar> <ci> vEdd_max </ci> </bvar> <apply> <divide/> <apply> <divide/> <apply> <times/> <ci> vEdd_max </ci> <ci> QEdd_pH </ci> <apply> <minus/> <ci> sixPG </ci> <apply> <divide/> <ci> KDPG </ci> <ci> KEdd_eq </ci> </apply> </apply> </apply> <apply> <plus/> <ci> KEdd_6PG_m </ci> <ci> sixPG </ci> <apply> <divide/> <apply> <times/> <ci> KEdd_6PG_m </ci> <ci> KDPG </ci> </apply> <ci> KEdd_KDPG_m </ci> </apply> </apply> </apply> <ci> default </ci> </apply> </lambda> </math> </functionDefinition> <functionDefinition id='Function_for_vD_GLCfeed' metaid='COPASI216' name='Function for vD_GLCfeed'> <math xmlns='http://www.w3.org/1998/Math/MathML'> <lambda> <bvar> <ci> D </ci> </bvar> <bvar> <ci> GLCfeed </ci> </bvar> <bvar> <ci> default </ci> </bvar> <apply> <divide/> <apply> <times/> <ci> D </ci> <ci> GLCfeed </ci> </apply> <ci> default </ci> </apply> </lambda> </math> </functionDefinition> <functionDefinition id='Function_for_vG_aceA' metaid='COPASI217' name='Function for vG_aceA'> <math xmlns='http://www.w3.org/1998/Math/MathML'> <lambda> <bvar> <ci> Cra </ci> </bvar> <bvar> <ci> CrpcAMP </ci> </bvar> <bvar> <ci> GOX </ci> </bvar> <bvar> <ci> IclRtotal </ci> </bvar> <bvar> <ci> KaceBAK_Cra </ci> </bvar> <bvar> <ci> KaceBAK_Crp </ci> </bvar> <bvar> <ci> KaceBAK_DNA </ci> </bvar> <bvar> <ci> KaceBAK_GOX </ci> </bvar> <bvar> <ci> KaceBAK_PYR </ci> </bvar> <bvar> <ci> KaceBAK_PYRprime </ci> </bvar> <bvar> <ci> LaceBAK </ci> </bvar> <bvar> <ci> PYR </ci> </bvar> <bvar> <ci> aceBAK_DNA </ci> </bvar> <bvar> <ci> default </ci> </bvar> <bvar> <ci> kaceBAK_cat_IclR </ci> </bvar> <bvar> <ci> kexpr </ci> </bvar> <bvar> <ci> mu </ci> </bvar> <bvar> <ci> vaceBAK_Cra_bound </ci> </bvar> <bvar> <ci> vaceBAK_Cra_unbound </ci> </bvar> <bvar> <ci> vaceBAK_Crp_bound </ci> </bvar> <bvar> <ci> vaceBAK_Crp_unbound </ci> </bvar> <apply> <divide/> <apply> <times/> <ci> mu </ci> <ci> kexpr </ci> <apply> <plus/> <apply> <times/> <apply> <minus/> <cn type='integer'> 1 </cn> <apply> <divide/> <ci> Cra </ci> <apply> <plus/> <ci> Cra </ci> <ci> KaceBAK_Cra </ci> </apply> </apply> </apply> <ci> vaceBAK_Cra_unbound </ci> </apply> <apply> <times/> <apply> <divide/> <ci> Cra </ci> <apply> <plus/> <ci> Cra </ci> <ci> KaceBAK_Cra </ci> </apply> </apply> <ci> vaceBAK_Cra_bound </ci> </apply> <apply> <times/> <apply> <minus/> <cn type='integer'> 1 </cn> <apply> <divide/> <ci> CrpcAMP </ci> <apply> <plus/> <ci> CrpcAMP </ci> <ci> KaceBAK_Crp </ci> </apply> </apply> </apply> <ci> vaceBAK_Crp_unbound </ci> </apply> <apply> <times/> <apply> <divide/> <ci> CrpcAMP </ci> <apply> <plus/> <ci> CrpcAMP </ci> <ci> KaceBAK_Crp </ci> </apply> </apply> <ci> vaceBAK_Crp_bound </ci> </apply> <apply> <times/> <apply> <minus/> <cn type='integer'> 1 </cn> <apply> <divide/> <apply> <times/> <apply> <divide/> <ci> aceBAK_DNA </ci> <ci> KaceBAK_DNA </ci> </apply> <apply> <plus/> <cn type='integer'> 1 </cn> <apply> <divide/> <ci> PYR </ci> <ci> KaceBAK_PYRprime </ci> </apply> </apply> </apply> <apply> <plus/> <cn type='integer'> 1 </cn> <apply> <times/> <apply> <divide/> <cn type='integer'> 1 </cn> <ci> LaceBAK </ci> </apply> <apply> <divide/> <ci> GOX </ci> <ci> KaceBAK_GOX </ci> </apply> <apply> <plus/> <cn type='integer'> 1 </cn> <apply> <divide/> <ci> GOX </ci> <ci> KaceBAK_GOX </ci> </apply> </apply> </apply> <apply> <divide/> <ci> aceBAK_DNA </ci> <ci> KaceBAK_DNA </ci> </apply> <apply> <divide/> <ci> PYR </ci> <ci> KaceBAK_PYR </ci> </apply> <apply> <divide/> <apply> <times/> <apply> <divide/> <ci> aceBAK_DNA </ci> <ci> KaceBAK_DNA </ci> </apply> <ci> PYR </ci> </apply> <ci> KaceBAK_PYRprime </ci> </apply> </apply> </apply> </apply> <ci> kaceBAK_cat_IclR </ci> <ci> IclRtotal </ci> </apply> </apply> </apply> <ci> default </ci> </apply> </lambda> </math> </functionDefinition> <functionDefinition id='Function_for_vG_aceB' metaid='COPASI218' name='Function for vG_aceB'> <math xmlns='http://www.w3.org/1998/Math/MathML'> <lambda> <bvar> <ci> Cra </ci> </bvar> <bvar> <ci> CrpcAMP </ci> </bvar> <bvar> <ci> Factor_aceB </ci> </bvar> <bvar> <ci> GOX </ci> </bvar> <bvar> <ci> IclRtotal </ci> </bvar> <bvar> <ci> KaceBAK_Cra </ci> </bvar> <bvar> <ci> KaceBAK_Crp </ci> </bvar> <bvar> <ci> KaceBAK_DNA </ci> </bvar> <bvar> <ci> KaceBAK_GOX </ci> </bvar> <bvar> <ci> KaceBAK_PYR </ci> </bvar> <bvar> <ci> KaceBAK_PYRprime </ci> </bvar> <bvar> <ci> LaceBAK </ci> </bvar> <bvar> <ci> PYR </ci> </bvar> <bvar> <ci> aceBAK_DNA </ci> </bvar> <bvar> <ci> default </ci> </bvar> <bvar> <ci> kaceBAK_cat_IclR </ci> </bvar> <bvar> <ci> kexpr </ci> </bvar> <bvar> <ci> mu </ci> </bvar> <bvar> <ci> vaceBAK_Cra_bound </ci> </bvar> <bvar> <ci> vaceBAK_Cra_unbound </ci> </bvar> <bvar> <ci> vaceBAK_Crp_bound </ci> </bvar> <bvar> <ci> vaceBAK_Crp_unbound </ci> </bvar> <apply> <divide/> <apply> <times/> <ci> Factor_aceB </ci> <ci> mu </ci> <ci> kexpr </ci> <apply> <plus/> <apply> <times/> <apply> <minus/> <cn type='integer'> 1 </cn> <apply> <divide/> <ci> Cra </ci> <apply> <plus/> <ci> Cra </ci> <ci> KaceBAK_Cra </ci> </apply> </apply> </apply> <ci> vaceBAK_Cra_unbound </ci> </apply> <apply> <times/> <apply> <divide/> <ci> Cra </ci> <apply> <plus/> <ci> Cra </ci> <ci> KaceBAK_Cra </ci> </apply> </apply> <ci> vaceBAK_Cra_bound </ci> </apply> <apply> <times/> <apply> <minus/> <cn type='integer'> 1 </cn> <apply> <divide/> <ci> CrpcAMP </ci> <apply> <plus/> <ci> CrpcAMP </ci> <ci> KaceBAK_Crp </ci> </apply> </apply> </apply> <ci> vaceBAK_Crp_unbound </ci> </apply> <apply> <times/> <apply> <divide/> <ci> CrpcAMP </ci> <apply> <plus/> <ci> CrpcAMP </ci> <ci> KaceBAK_Crp </ci> </apply> </apply> <ci> vaceBAK_Crp_bound </ci> </apply> <apply> <times/> <apply> <minus/> <cn type='integer'> 1 </cn> <apply> <divide/> <apply> <times/> <apply> <divide/> <ci> aceBAK_DNA </ci> <ci> KaceBAK_DNA </ci> </apply> <apply> <plus/> <cn type='integer'> 1 </cn> <apply> <divide/> <ci> PYR </ci> <ci> KaceBAK_PYRprime </ci> </apply> </apply> </apply> <apply> <plus/> <cn type='integer'> 1 </cn> <apply> <times/> <apply> <divide/> <cn type='integer'> 1 </cn> <ci> LaceBAK </ci> </apply> <apply> <divide/> <ci> GOX </ci> <ci> KaceBAK_GOX </ci> </apply> <apply> <plus/> <cn type='integer'> 1 </cn> <apply> <divide/> <ci> GOX </ci> <ci> KaceBAK_GOX </ci> </apply> </apply> </apply> <apply> <divide/> <ci> aceBAK_DNA </ci> <ci> KaceBAK_DNA </ci> </apply> <apply> <divide/> <ci> PYR </ci> <ci> KaceBAK_PYR </ci> </apply> <apply> <divide/> <apply> <times/> <apply> <divide/> <ci> aceBAK_DNA </ci> <ci> KaceBAK_DNA </ci> </apply> <ci> PYR </ci> </apply> <ci> KaceBAK_PYRprime </ci> </apply> </apply> </apply> </apply> <ci> kaceBAK_cat_IclR </ci> <ci> IclRtotal </ci> </apply> </apply> </apply> <ci> default </ci> </apply> </lambda> </math> </functionDefinition> <functionDefinition id='Function_for_vG_aceK' metaid='COPASI219' name='Function for vG_aceK'> <math xmlns='http://www.w3.org/1998/Math/MathML'> <lambda> <bvar> <ci> Cra </ci> </bvar> <bvar> <ci> CrpcAMP </ci> </bvar> <bvar> <ci> Factor_aceK </ci> </bvar> <bvar> <ci> GOX </ci> </bvar> <bvar> <ci> IclRtotal </ci> </bvar> <bvar> <ci> KaceBAK_Cra </ci> </bvar> <bvar> <ci> KaceBAK_Crp </ci> </bvar> <bvar> <ci> KaceBAK_DNA </ci> </bvar> <bvar> <ci> KaceBAK_GOX </ci> </bvar> <bvar> <ci> KaceBAK_PYR </ci> </bvar> <bvar> <ci> KaceBAK_PYRprime </ci> </bvar> <bvar> <ci> LaceBAK </ci> </bvar> <bvar> <ci> PYR </ci> </bvar> <bvar> <ci> aceBAK_DNA </ci> </bvar> <bvar> <ci> default </ci> </bvar> <bvar> <ci> kaceBAK_cat_IclR </ci> </bvar> <bvar> <ci> kexpr </ci> </bvar> <bvar> <ci> mu </ci> </bvar> <bvar> <ci> vaceBAK_Cra_bound </ci> </bvar> <bvar> <ci> vaceBAK_Cra_unbound </ci> </bvar> <bvar> <ci> vaceBAK_Crp_bound </ci> </bvar> <bvar> <ci> vaceBAK_Crp_unbound </ci> </bvar> <apply> <divide/> <apply> <times/> <ci> Factor_aceK </ci> <ci> mu </ci> <ci> kexpr </ci> <apply> <plus/> <apply> <times/> <apply> <minus/> <cn type='integer'> 1 </cn> <apply> <divide/> <ci> Cra </ci> <apply> <plus/> <ci> Cra </ci> <ci> KaceBAK_Cra </ci> </apply> </apply> </apply> <ci> vaceBAK_Cra_unbound </ci> </apply> <apply> <times/> <apply> <divide/> <ci> Cra </ci> <apply> <plus/> <ci> Cra </ci> <ci> KaceBAK_Cra </ci> </apply> </apply> <ci> vaceBAK_Cra_bound </ci> </apply> <apply> <times/> <apply> <minus/> <cn type='integer'> 1 </cn> <apply> <divide/> <ci> CrpcAMP </ci> <apply> <plus/> <ci> CrpcAMP </ci> <ci> KaceBAK_Crp </ci> </apply> </apply> </apply> <ci> vaceBAK_Crp_unbound </ci> </apply> <apply> <times/> <apply> <divide/> <ci> CrpcAMP </ci> <apply> <plus/> <ci> CrpcAMP </ci> <ci> KaceBAK_Crp </ci> </apply> </apply> <ci> vaceBAK_Crp_bound </ci> </apply> <apply> <times/> <apply> <minus/> <cn type='integer'> 1 </cn> <apply> <divide/> <apply> <times/> <apply> <divide/> <ci> aceBAK_DNA </ci> <ci> KaceBAK_DNA </ci> </apply> <apply> <plus/> <cn type='integer'> 1 </cn> <apply> <divide/> <ci> PYR </ci> <ci> KaceBAK_PYRprime </ci> </apply> </apply> </apply> <apply> <plus/> <cn type='integer'> 1 </cn> <apply> <times/> <apply> <divide/> <cn type='integer'> 1 </cn> <ci> LaceBAK </ci> </apply> <apply> <divide/> <ci> GOX </ci> <ci> KaceBAK_GOX </ci> </apply> <apply> <plus/> <cn type='integer'> 1 </cn> <apply> <divide/> <ci> GOX </ci> <ci> KaceBAK_GOX </ci> </apply> </apply> </apply> <apply> <divide/> <ci> aceBAK_DNA </ci> <ci> KaceBAK_DNA </ci> </apply> <apply> <divide/> <ci> PYR </ci> <ci> KaceBAK_PYR </ci> </apply> <apply> <divide/> <apply> <times/> <apply> <divide/> <ci> aceBAK_DNA </ci> <ci> KaceBAK_DNA </ci> </apply> <ci> PYR </ci> </apply> <ci> KaceBAK_PYRprime </ci> </apply> </apply> </apply> </apply> <ci> kaceBAK_cat_IclR </ci> <ci> IclRtotal </ci> </apply> </apply> </apply> <ci> default </ci> </apply> </lambda> </math> </functionDefinition> <functionDefinition id='Function_for_vG_acs' metaid='COPASI220' name='Function for vG_acs'> <math xmlns='http://www.w3.org/1998/Math/MathML'> <lambda> <bvar> <ci> CrpcAMP </ci> </bvar> <bvar> <ci> Kacs_Crp </ci> </bvar> <bvar> <ci> default </ci> </bvar> <bvar> <ci> kexpr </ci> </bvar> <bvar> <ci> mu </ci> </bvar> <bvar> <ci> nacs </ci> </bvar> <bvar> <ci> vacs_Crp_bound </ci> </bvar> <bvar> <ci> vacs_Crp_unbound </ci> </bvar> <apply> <divide/> <apply> <times/> <ci> mu </ci> <ci> kexpr </ci> <apply> <plus/> <apply> <times/> <apply> <minus/> <cn type='integer'> 1 </cn> <apply> <divide/> <apply> <power/> <ci> CrpcAMP </ci> <ci> nacs </ci> </apply> <apply> <plus/> <apply> <power/> <ci> CrpcAMP </ci> <ci> nacs </ci> </apply> <apply> <power/> <ci> Kacs_Crp </ci> <ci> nacs </ci> </apply> </apply> </apply> </apply> <ci> vacs_Crp_unbound </ci> </apply> <apply> <times/> <apply> <divide/> <apply> <power/> <ci> CrpcAMP </ci> <ci> nacs </ci> </apply> <apply> <plus/> <apply> <power/> <ci> CrpcAMP </ci> <ci> nacs </ci> </apply> <apply> <power/> <ci> Kacs_Crp </ci> <ci> nacs </ci> </apply> </apply> </apply> <ci> vacs_Crp_bound </ci> </apply> </apply> </apply> <ci> default </ci> </apply> </lambda> </math> </functionDefinition> <functionDefinition id='Function_for_vG_fbaA' metaid='COPASI221' name='Function for vG_fbaA'> <math xmlns='http://www.w3.org/1998/Math/MathML'> <lambda> <bvar> <ci> Cra </ci> </bvar> <bvar> <ci> CrpcAMP </ci> </bvar> <bvar> <ci> KfbaA_Cra </ci> </bvar> <bvar> <ci> KfbaA_Crp </ci> </bvar> <bvar> <ci> default </ci> </bvar> <bvar> <ci> kexpr </ci> </bvar> <bvar> <ci> mu </ci> </bvar> <bvar> <ci> vfbaA_Cra_bound </ci> </bvar> <bvar> <ci> vfbaA_Cra_unbound </ci> </bvar> <bvar> <ci> vfbaA_Crp_bound </ci> </bvar> <bvar> <ci> vfbaA_Crp_unbound </ci> </bvar> <apply> <divide/> <apply> <times/> <ci> mu </ci> <ci> kexpr </ci> <apply> <plus/> <apply> <times/> <apply> <minus/> <cn type='integer'> 1 </cn> <apply> <divide/> <ci> Cra </ci> <apply> <plus/> <ci> Cra </ci> <ci> KfbaA_Cra </ci> </apply> </apply> </apply> <ci> vfbaA_Cra_unbound </ci> </apply> <apply> <times/> <apply> <divide/> <ci> Cra </ci> <apply> <plus/> <ci> Cra </ci> <ci> KfbaA_Cra </ci> </apply> </apply> <ci> vfbaA_Cra_bound </ci> </apply> <apply> <times/> <apply> <minus/> <cn type='integer'> 1 </cn> <apply> <divide/> <ci> CrpcAMP </ci> <apply> <plus/> <ci> CrpcAMP </ci> <ci> KfbaA_Crp </ci> </apply> </apply> </apply> <ci> vfbaA_Crp_unbound </ci> </apply> <apply> <times/> <apply> <divide/> <ci> CrpcAMP </ci> <apply> <plus/> <ci> CrpcAMP </ci> <ci> KfbaA_Crp </ci> </apply> </apply> <ci> vfbaA_Crp_bound </ci> </apply> </apply> </apply> <ci> default </ci> </apply> </lambda> </math> </functionDefinition> <functionDefinition id='Function_for_vG_fbp' metaid='COPASI222' name='Function for vG_fbp'> <math xmlns='http://www.w3.org/1998/Math/MathML'> <lambda> <bvar> <ci> Cra </ci> </bvar> <bvar> <ci> Kfbp_Cra </ci> </bvar> <bvar> <ci> default </ci> </bvar> <bvar> <ci> kexpr </ci> </bvar> <bvar> <ci> mu </ci> </bvar> <bvar> <ci> vfbp_Cra_bound </ci> </bvar> <bvar> <ci> vfbp_Cra_unbound </ci> </bvar> <apply> <divide/> <apply> <times/> <ci> mu </ci> <ci> kexpr </ci> <apply> <plus/> <apply> <times/> <apply> <minus/> <cn type='integer'> 1 </cn> <apply> <divide/> <ci> Cra </ci> <apply> <plus/> <ci> Cra </ci> <ci> Kfbp_Cra </ci> </apply> </apply> </apply> <ci> vfbp_Cra_unbound </ci> </apply> <apply> <times/> <apply> <divide/> <ci> Cra </ci> <apply> <plus/> <ci> Cra </ci> <ci> Kfbp_Cra </ci> </apply> </apply> <ci> vfbp_Cra_bound </ci> </apply> </apply> </apply> <ci> default </ci> </apply> </lambda> </math> </functionDefinition> <functionDefinition id='Function_for_vG_fumABC' metaid='COPASI223' name='Function for vG_fumABC'> <math xmlns='http://www.w3.org/1998/Math/MathML'> <lambda> <bvar> <ci> CrpcAMP </ci> </bvar> <bvar> <ci> KfumABC_Crp </ci> </bvar> <bvar> <ci> default </ci> </bvar> <bvar> <ci> kexpr </ci> </bvar> <bvar> <ci> mu </ci> </bvar> <bvar> <ci> nfumABC </ci> </bvar> <bvar> <ci> vfumABC_Crp_bound </ci> </bvar> <bvar> <ci> vfumABC_Crp_unbound </ci> </bvar> <apply> <divide/> <apply> <times/> <ci> mu </ci> <ci> kexpr </ci> <apply> <plus/> <apply> <times/> <apply> <minus/> <cn type='integer'> 1 </cn> <apply> <divide/> <apply> <power/> <ci> CrpcAMP </ci> <ci> nfumABC </ci> </apply> <apply> <plus/> <apply> <power/> <ci> CrpcAMP </ci> <ci> nfumABC </ci> </apply> <apply> <power/> <ci> KfumABC_Crp </ci> <ci> nfumABC </ci> </apply> </apply> </apply> </apply> <ci> vfumABC_Crp_unbound </ci> </apply> <apply> <times/> <apply> <divide/> <apply> <power/> <ci> CrpcAMP </ci> <ci> nfumABC </ci> </apply> <apply> <plus/> <apply> <power/> <ci> CrpcAMP </ci> <ci> nfumABC </ci> </apply> <apply> <power/> <ci> KfumABC_Crp </ci> <ci> nfumABC </ci> </apply> </apply> </apply> <ci> vfumABC_Crp_bound </ci> </apply> </apply> </apply> <ci> default </ci> </apply> </lambda> </math> </functionDefinition> <functionDefinition id='Function_for_vG_gapA' metaid='COPASI224' name='Function for vG_gapA'> <math xmlns='http://www.w3.org/1998/Math/MathML'> <lambda> <bvar> <ci> Cra </ci> </bvar> <bvar> <ci> CrpcAMP </ci> </bvar> <bvar> <ci> KgapA_Cra </ci> </bvar> <bvar> <ci> KgapA_Crp </ci> </bvar> <bvar> <ci> default </ci> </bvar> <bvar> <ci> kexpr </ci> </bvar> <bvar> <ci> mu </ci> </bvar> <bvar> <ci> vgapA_Cra_bound </ci> </bvar> <bvar> <ci> vgapA_Cra_unbound </ci> </bvar> <bvar> <ci> vgapA_Crp_bound </ci> </bvar> <bvar> <ci> vgapA_Crp_unbound </ci> </bvar> <apply> <divide/> <apply> <times/> <ci> mu </ci> <ci> kexpr </ci> <apply> <plus/> <apply> <times/> <apply> <minus/> <cn type='integer'> 1 </cn> <apply> <divide/> <ci> Cra </ci> <apply> <plus/> <ci> Cra </ci> <ci> KgapA_Cra </ci> </apply> </apply> </apply> <ci> vgapA_Cra_unbound </ci> </apply> <apply> <times/> <apply> <divide/> <ci> Cra </ci> <apply> <plus/> <ci> Cra </ci> <ci> KgapA_Cra </ci> </apply> </apply> <ci> vgapA_Cra_bound </ci> </apply> <apply> <times/> <apply> <minus/> <cn type='integer'> 1 </cn> <apply> <divide/> <ci> CrpcAMP </ci> <apply> <plus/> <ci> CrpcAMP </ci> <ci> KgapA_Crp </ci> </apply> </apply> </apply> <ci> vgapA_Crp_unbound </ci> </apply> <apply> <times/> <apply> <divide/> <ci> CrpcAMP </ci> <apply> <plus/> <ci> CrpcAMP </ci> <ci> KgapA_Crp </ci> </apply> </apply> <ci> vgapA_Crp_bound </ci> </apply> </apply> </apply> <ci> default </ci> </apply> </lambda> </math> </functionDefinition> <functionDefinition id='Function_for_vG_glk' metaid='COPASI225' name='Function for vG_glk'> <math xmlns='http://www.w3.org/1998/Math/MathML'> <lambda> <bvar> <ci> Cra </ci> </bvar> <bvar> <ci> Kglk_Cra </ci> </bvar> <bvar> <ci> default </ci> </bvar> <bvar> <ci> kexpr </ci> </bvar> <bvar> <ci> mu </ci> </bvar> <bvar> <ci> vglk_Cra_bound </ci> </bvar> <bvar> <ci> vglk_Cra_unbound </ci> </bvar> <apply> <divide/> <apply> <times/> <ci> mu </ci> <ci> kexpr </ci> <apply> <plus/> <apply> <times/> <apply> <minus/> <cn type='integer'> 1 </cn> <apply> <divide/> <ci> Cra </ci> <apply> <plus/> <ci> Cra </ci> <ci> Kglk_Cra </ci> </apply> </apply> </apply> <ci> vglk_Cra_unbound </ci> </apply> <apply> <times/> <apply> <divide/> <ci> Cra </ci> <apply> <plus/> <ci> Cra </ci> <ci> Kglk_Cra </ci> </apply> </apply> <ci> vglk_Cra_bound </ci> </apply> </apply> </apply> <ci> default </ci> </apply> </lambda> </math> </functionDefinition> <functionDefinition id='Function_for_vG_gltA' metaid='COPASI226' name='Function for vG_gltA'> <math xmlns='http://www.w3.org/1998/Math/MathML'> <lambda> <bvar> <ci> CrpcAMP </ci> </bvar> <bvar> <ci> KgltA_Crp </ci> </bvar> <bvar> <ci> default </ci> </bvar> <bvar> <ci> kexpr </ci> </bvar> <bvar> <ci> mu </ci> </bvar> <bvar> <ci> ngltA </ci> </bvar> <bvar> <ci> vgltA_Crp_bound </ci> </bvar> <bvar> <ci> vgltA_Crp_unbound </ci> </bvar> <apply> <divide/> <apply> <times/> <ci> mu </ci> <ci> kexpr </ci> <apply> <plus/> <apply> <times/> <apply> <minus/> <cn type='integer'> 1 </cn> <apply> <divide/> <apply> <power/> <ci> CrpcAMP </ci> <ci> ngltA </ci> </apply> <apply> <plus/> <apply> <power/> <ci> CrpcAMP </ci> <ci> ngltA </ci> </apply> <apply> <power/> <ci> KgltA_Crp </ci> <ci> ngltA </ci> </apply> </apply> </apply> </apply> <ci> vgltA_Crp_unbound </ci> </apply> <apply> <times/> <apply> <divide/> <apply> <power/> <ci> CrpcAMP </ci> <ci> ngltA </ci> </apply> <apply> <plus/> <apply> <power/> <ci> CrpcAMP </ci> <ci> ngltA </ci> </apply> <apply> <power/> <ci> KgltA_Crp </ci> <ci> ngltA </ci> </apply> </apply> </apply> <ci> vgltA_Crp_bound </ci> </apply> </apply> </apply> <ci> default </ci> </apply> </lambda> </math> </functionDefinition> <functionDefinition id='Function_for_vG_icdA' metaid='COPASI227' name='Function for vG_icdA'> <math xmlns='http://www.w3.org/1998/Math/MathML'> <lambda> <bvar> <ci> Cra </ci> </bvar> <bvar> <ci> KicdA_Cra </ci> </bvar> <bvar> <ci> default </ci> </bvar> <bvar> <ci> kexpr </ci> </bvar> <bvar> <ci> mu </ci> </bvar> <bvar> <ci> vicdA_Cra_bound </ci> </bvar> <bvar> <ci> vicdA_Cra_unbound </ci> </bvar> <apply> <divide/> <apply> <times/> <ci> mu </ci> <ci> kexpr </ci> <apply> <plus/> <apply> <times/> <apply> <minus/> <cn type='integer'> 1 </cn> <apply> <divide/> <ci> Cra </ci> <apply> <plus/> <ci> Cra </ci> <ci> KicdA_Cra </ci> </apply> </apply> </apply> <ci> vicdA_Cra_unbound </ci> </apply> <apply> <times/> <apply> <divide/> <ci> Cra </ci> <apply> <plus/> <ci> Cra </ci> <ci> KicdA_Cra </ci> </apply> </apply> <ci> vicdA_Cra_bound </ci> </apply> </apply> </apply> <ci> default </ci> </apply> </lambda> </math> </functionDefinition> <functionDefinition id='Function_for_vG_maeB' metaid='COPASI228' name='Function for vG_maeB'> <math xmlns='http://www.w3.org/1998/Math/MathML'> <lambda> <bvar> <ci> SS_Mez </ci> </bvar> <bvar> <ci> default </ci> </bvar> <bvar> <ci> kdegr </ci> </bvar> <bvar> <ci> mu </ci> </bvar> <apply> <divide/> <apply> <times/> <apply> <plus/> <ci> mu </ci> <ci> kdegr </ci> </apply> <ci> SS_Mez </ci> </apply> <ci> default </ci> </apply> </lambda> </math> </functionDefinition> <functionDefinition id='Function_for_vG_mdh' metaid='COPASI229' name='Function for vG_mdh'> <math xmlns='http://www.w3.org/1998/Math/MathML'> <lambda> <bvar> <ci> CrpcAMP </ci> </bvar> <bvar> <ci> Kmdh_Crp </ci> </bvar> <bvar> <ci> default </ci> </bvar> <bvar> <ci> kexpr </ci> </bvar> <bvar> <ci> mu </ci> </bvar> <bvar> <ci> vmdh_Crp_bound </ci> </bvar> <bvar> <ci> vmdh_Crp_unbound </ci> </bvar> <apply> <divide/> <apply> <times/> <ci> mu </ci> <ci> kexpr </ci> <apply> <plus/> <apply> <times/> <apply> <minus/> <cn type='integer'> 1 </cn> <apply> <divide/> <ci> CrpcAMP </ci> <apply> <plus/> <ci> CrpcAMP </ci> <ci> Kmdh_Crp </ci> </apply> </apply> </apply> <ci> vmdh_Crp_unbound </ci> </apply> <apply> <times/> <apply> <divide/> <ci> CrpcAMP </ci> <apply> <plus/> <ci> CrpcAMP </ci> <ci> Kmdh_Crp </ci> </apply> </apply> <ci> vmdh_Crp_bound </ci> </apply> </apply> </apply> <ci> default </ci> </apply> </lambda> </math> </functionDefinition> <functionDefinition id='Function_for_vE_R5PI' metaid='COPASI230' name='Function for vE_R5PI'> <math xmlns='http://www.w3.org/1998/Math/MathML'> <lambda> <bvar> <ci> KR5PI_eq </ci> </bvar> <bvar> <ci> R5P </ci> </bvar> <bvar> <ci> RU5P </ci> </bvar> <bvar> <ci> default </ci> </bvar> <bvar> <ci> vR5PI_max </ci> </bvar> <apply> <divide/> <apply> <times/> <ci> vR5PI_max </ci> <apply> <minus/> <ci> RU5P </ci> <apply> <divide/> <ci> R5P </ci> <ci> KR5PI_eq </ci> </apply> </apply> </apply> <ci> default </ci> </apply> </lambda> </math> </functionDefinition> <functionDefinition id='Function_for_vE_Pps' metaid='COPASI231' name='Function for vE_Pps'> <math xmlns='http://www.w3.org/1998/Math/MathML'> <lambda> <bvar> <ci> KPps_PEP </ci> </bvar> <bvar> <ci> KPps_PYR </ci> </bvar> <bvar> <ci> LPps </ci> </bvar> <bvar> <ci> PEP </ci> </bvar> <bvar> <ci> PYR </ci> </bvar> <bvar> <ci> Pps </ci> </bvar> <bvar> <ci> default </ci> </bvar> <bvar> <ci> kPps_cat </ci> </bvar> <bvar> <ci> nPps </ci> </bvar> <apply> <divide/> <apply> <divide/> <apply> <times/> <apply> <divide/> <apply> <times/> <ci> Pps </ci> <ci> kPps_cat </ci> <ci> PYR </ci> </apply> <ci> KPps_PYR </ci> </apply> <apply> <power/> <apply> <plus/> <cn type='integer'> 1 </cn> <apply> <divide/> <ci> PYR </ci> <ci> KPps_PYR </ci> </apply> </apply> <apply> <minus/> <ci> nPps </ci> <cn type='integer'> 1 </cn> </apply> </apply> </apply> <apply> <plus/> <apply> <power/> <apply> <plus/> <cn type='integer'> 1 </cn> <apply> <divide/> <ci> PYR </ci> <ci> KPps_PYR </ci> </apply> </apply> <ci> nPps </ci> </apply> <apply> <times/> <ci> LPps </ci> <apply> <power/> <apply> <plus/> <cn type='integer'> 1 </cn> <apply> <divide/> <ci> PEP </ci> <ci> KPps_PEP </ci> </apply> </apply> <ci> nPps </ci> </apply> </apply> </apply> </apply> <ci> default </ci> </apply> </lambda> </math> </functionDefinition> <functionDefinition id='Function_for_vE_Pgi' metaid='COPASI232' name='Function for vE_Pgi'> <math xmlns='http://www.w3.org/1998/Math/MathML'> <lambda> <bvar> <ci> F6P </ci> </bvar> <bvar> <ci> G6P </ci> </bvar> <bvar> <ci> KPgi_F6P </ci> </bvar> <bvar> <ci> KPgi_F6P_6pginh </ci> </bvar> <bvar> <ci> KPgi_G6P </ci> </bvar> <bvar> <ci> KPgi_G6P_6pginh </ci> </bvar> <bvar> <ci> KPgi_eq </ci> </bvar> <bvar> <ci> default </ci> </bvar> <bvar> <ci> sixPG </ci> </bvar> <bvar> <ci> vPgi_max </ci> </bvar> <apply> <divide/> <apply> <divide/> <apply> <times/> <ci> vPgi_max </ci> <apply> <minus/> <ci> G6P </ci> <apply> <divide/> <ci> F6P </ci> <ci> KPgi_eq </ci> </apply> </apply> </apply> <apply> <plus/> <apply> <times/> <ci> KPgi_G6P </ci> <apply> <plus/> <cn type='integer'> 1 </cn> <apply> <divide/> <ci> F6P </ci> <apply> <times/> <ci> KPgi_F6P </ci> <apply> <plus/> <cn type='integer'> 1 </cn> <apply> <divide/> <ci> sixPG </ci> <ci> KPgi_F6P_6pginh </ci> </apply> </apply> </apply> </apply> <apply> <divide/> <ci> sixPG </ci> <ci> KPgi_G6P_6pginh </ci> </apply> </apply> </apply> <ci> G6P </ci> </apply> </apply> <ci> default </ci> </apply> </lambda> </math> </functionDefinition> <functionDefinition id='Function_for_vE_Pta' metaid='COPASI233' name='Function for vE_Pta'> <math xmlns='http://www.w3.org/1998/Math/MathML'> <lambda> <bvar> <ci> AcCoA </ci> </bvar> <bvar> <ci> AcP </ci> </bvar> <bvar> <ci> CoA </ci> </bvar> <bvar> <ci> KPta_AcCoA_i </ci> </bvar> <bvar> <ci> KPta_AcP_i </ci> </bvar> <bvar> <ci> KPta_AcP_m </ci> </bvar> <bvar> <ci> KPta_CoA_i </ci> </bvar> <bvar> <ci> KPta_Pi_i </ci> </bvar> <bvar> <ci> KPta_Pi_m </ci> </bvar> <bvar> <ci> KPta_eq </ci> </bvar> <bvar> <ci> Pi </ci> </bvar> <bvar> <ci> default </ci> </bvar> <bvar> <ci> vPta_max </ci> </bvar> <apply> <divide/> <apply> <divide/> <apply> <times/> <ci> vPta_max </ci> <apply> <divide/> <cn type='integer'> 1 </cn> <apply> <times/> <ci> KPta_AcCoA_i </ci> <ci> KPta_Pi_m </ci> </apply> </apply> <apply> <minus/> <apply> <times/> <ci> AcCoA </ci> <ci> Pi </ci> </apply> <apply> <divide/> <apply> <times/> <ci> AcP </ci> <ci> CoA </ci> </apply> <ci> KPta_eq </ci> </apply> </apply> </apply> <apply> <plus/> <cn type='integer'> 1 </cn> <apply> <divide/> <ci> AcCoA </ci> <ci> KPta_AcCoA_i </ci> </apply> <apply> <divide/> <ci> Pi </ci> <ci> KPta_Pi_i </ci> </apply> <apply> <divide/> <ci> AcP </ci> <ci> KPta_AcP_i </ci> </apply> <apply> <divide/> <ci> CoA </ci> <ci> KPta_CoA_i </ci> </apply> <apply> <divide/> <apply> <times/> <ci> AcCoA </ci> <ci> Pi </ci> </apply> <apply> <times/> <ci> KPta_AcCoA_i </ci> <ci> KPta_Pi_m </ci> </apply> </apply> <apply> <divide/> <apply> <times/> <ci> AcP </ci> <ci> CoA </ci> </apply> <apply> <times/> <ci> KPta_AcP_m </ci> <ci> KPta_CoA_i </ci> </apply> </apply> </apply> </apply> <ci> default </ci> </apply> </lambda> </math> </functionDefinition> <functionDefinition id='Function_for_vE_SDH' metaid='COPASI234' name='Function for vE_SDH'> <math xmlns='http://www.w3.org/1998/Math/MathML'> <lambda> <bvar> <ci> FUM </ci> </bvar> <bvar> <ci> KSDH_SUC_m </ci> </bvar> <bvar> <ci> KSDH_eq </ci> </bvar> <bvar> <ci> SUC </ci> </bvar> <bvar> <ci> default </ci> </bvar> <bvar> <ci> vSDH1_max </ci> </bvar> <bvar> <ci> vSDH2_max </ci> </bvar> <apply> <divide/> <apply> <divide/> <apply> <times/> <ci> vSDH1_max </ci> <ci> vSDH2_max </ci> <apply> <minus/> <ci> SUC </ci> <apply> <divide/> <ci> FUM </ci> <ci> KSDH_eq </ci> </apply> </apply> </apply> <apply> <plus/> <apply> <times/> <ci> KSDH_SUC_m </ci> <ci> vSDH2_max </ci> </apply> <apply> <times/> <ci> vSDH2_max </ci> <ci> SUC </ci> </apply> <apply> <divide/> <apply> <times/> <ci> vSDH1_max </ci> <ci> FUM </ci> </apply> <ci> KSDH_eq </ci> </apply> </apply> </apply> <ci> default </ci> </apply> </lambda> </math> </functionDefinition> <functionDefinition id='Function_for_vE_Pgl' metaid='COPASI235' name='Function for vE_Pgl'> <math xmlns='http://www.w3.org/1998/Math/MathML'> <lambda> <bvar> <ci> H </ci> </bvar> <bvar> <ci> KPgl_6PGL_m </ci> </bvar> <bvar> <ci> KPgl_6PG_m </ci> </bvar> <bvar> <ci> KPgl_eq </ci> </bvar> <bvar> <ci> KPgl_h1 </ci> </bvar> <bvar> <ci> KPgl_h2 </ci> </bvar> <bvar> <ci> default </ci> </bvar> <bvar> <ci> sixPG </ci> </bvar> <bvar> <ci> sixPGL </ci> </bvar> <bvar> <ci> vPgl_max </ci> </bvar> <apply> <divide/> <apply> <divide/> <apply> <times/> <ci> vPgl_max </ci> <apply> <minus/> <ci> sixPGL </ci> <apply> <divide/> <ci> sixPG </ci> <ci> KPgl_eq </ci> </apply> </apply> </apply> <apply> <times/> <apply> <plus/> <cn type='integer'> 1 </cn> <apply> <divide/> <ci> H </ci> <ci> KPgl_h1 </ci> </apply> <apply> <divide/> <ci> KPgl_h2 </ci> <ci> H </ci> </apply> </apply> <apply> <plus/> <ci> KPgl_6PGL_m </ci> <ci> sixPGL </ci> <apply> <times/> <apply> <divide/> <ci> KPgl_6PGL_m </ci> <ci> KPgl_6PG_m </ci> </apply> <ci> sixPG </ci> </apply> </apply> </apply> </apply> <ci> default </ci> </apply> </lambda> </math> </functionDefinition> <functionDefinition id='Function_for_vE_Tal' metaid='COPASI236' name='Function for vE_Tal'> <math xmlns='http://www.w3.org/1998/Math/MathML'> <lambda> <bvar> <ci> E4P </ci> </bvar> <bvar> <ci> F6P </ci> </bvar> <bvar> <ci> GAP </ci> </bvar> <bvar> <ci> KTal_eq </ci> </bvar> <bvar> <ci> S7P </ci> </bvar> <bvar> <ci> default </ci> </bvar> <bvar> <ci> vTal_max </ci> </bvar> <apply> <divide/> <apply> <times/> <ci> vTal_max </ci> <apply> <minus/> <apply> <times/> <ci> GAP </ci> <ci> S7P </ci> </apply> <apply> <divide/> <apply> <times/> <ci> E4P </ci> <ci> F6P </ci> </apply> <ci> KTal_eq </ci> </apply> </apply> </apply> <ci> default </ci> </apply> </lambda> </math> </functionDefinition> <functionDefinition id='Function_for_vE_TktB' metaid='COPASI237' name='Function for vE_TktB'> <math xmlns='http://www.w3.org/1998/Math/MathML'> <lambda> <bvar> <ci> E4P </ci> </bvar> <bvar> <ci> F6P </ci> </bvar> <bvar> <ci> GAP </ci> </bvar> <bvar> <ci> KTktB_eq </ci> </bvar> <bvar> <ci> X5P </ci> </bvar> <bvar> <ci> default </ci> </bvar> <bvar> <ci> vTktB_max </ci> </bvar> <apply> <divide/> <apply> <times/> <ci> vTktB_max </ci> <apply> <minus/> <apply> <times/> <ci> X5P </ci> <ci> E4P </ci> </apply> <apply> <divide/> <apply> <times/> <ci> F6P </ci> <ci> GAP </ci> </apply> <ci> KTktB_eq </ci> </apply> </apply> </apply> <ci> default </ci> </apply> </lambda> </math> </functionDefinition> <functionDefinition id='Function_for_vE_aKGDH' metaid='COPASI238' name='Function for vE_aKGDH'> <math xmlns='http://www.w3.org/1998/Math/MathML'> <lambda> <bvar> <ci> CoA </ci> </bvar> <bvar> <ci> KaKGDH_CoA_m </ci> </bvar> <bvar> <ci> KaKGDH_NADH_I </ci> </bvar> <bvar> <ci> KaKGDH_NAD_m </ci> </bvar> <bvar> <ci> KaKGDH_SUC_I </ci> </bvar> <bvar> <ci> KaKGDH_Z </ci> </bvar> <bvar> <ci> KaKGDH_aKG_I </ci> </bvar> <bvar> <ci> KaKGDH_aKG_m </ci> </bvar> <bvar> <ci> NAD </ci> </bvar> <bvar> <ci> NADH </ci> </bvar> <bvar> <ci> SUC </ci> </bvar> <bvar> <ci> aKG </ci> </bvar> <bvar> <ci> aKGDH </ci> </bvar> <bvar> <ci> default </ci> </bvar> <bvar> <ci> kaKGDH_cat </ci> </bvar> <apply> <divide/> <apply> <divide/> <apply> <times/> <ci> aKGDH </ci> <ci> kaKGDH_cat </ci> <ci> aKG </ci> <ci> CoA </ci> <ci> NAD </ci> </apply> <apply> <plus/> <apply> <times/> <ci> KaKGDH_NAD_m </ci> <ci> aKG </ci> <ci> CoA </ci> </apply> <apply> <times/> <ci> KaKGDH_CoA_m </ci> <ci> aKG </ci> <ci> NAD </ci> </apply> <apply> <times/> <ci> KaKGDH_aKG_m </ci> <ci> CoA </ci> <ci> NAD </ci> </apply> <apply> <times/> <ci> aKG </ci> <ci> CoA </ci> <ci> NAD </ci> </apply> <apply> <divide/> <apply> <times/> <ci> KaKGDH_aKG_m </ci> <ci> KaKGDH_Z </ci> <ci> SUC </ci> <ci> NADH </ci> </apply> <ci> KaKGDH_SUC_I </ci> </apply> <apply> <divide/> <apply> <times/> <ci> KaKGDH_NAD_m </ci> <ci> aKG </ci> <ci> CoA </ci> <ci> NADH </ci> </apply> <ci> KaKGDH_NADH_I </ci> </apply> <apply> <divide/> <apply> <times/> <ci> KaKGDH_CoA_m </ci> <ci> aKG </ci> <ci> NAD </ci> <ci> SUC </ci> </apply> <ci> KaKGDH_SUC_I </ci> </apply> <apply> <divide/> <apply> <times/> <ci> KaKGDH_aKG_m </ci> <ci> KaKGDH_Z </ci> <ci> aKG </ci> <ci> SUC </ci> <ci> NADH </ci> </apply> <apply> <times/> <ci> KaKGDH_aKG_I </ci> <ci> KaKGDH_SUC_I </ci> </apply> </apply> </apply> </apply> <ci> default </ci> </apply> </lambda> </math> </functionDefinition> <functionDefinition id='Function_for_vE_cAMPdegr' metaid='COPASI239' name='Function for vE_cAMPdegr'> <math xmlns='http://www.w3.org/1998/Math/MathML'> <lambda> <bvar> <ci> KcAMPdegr_cAMP </ci> </bvar> <bvar> <ci> cAMP </ci> </bvar> <bvar> <ci> default </ci> </bvar> <bvar> <ci> vcAMPdegr_max </ci> </bvar> <apply> <divide/> <apply> <divide/> <apply> <times/> <ci> vcAMPdegr_max </ci> <ci> cAMP </ci> </apply> <apply> <plus/> <ci> cAMP </ci> <ci> KcAMPdegr_cAMP </ci> </apply> </apply> <ci> default </ci> </apply> </lambda> </math> </functionDefinition> <functionDefinition id='Function_for_vBM_GAP' metaid='COPASI240' name='Function for vBM_GAP'> <math xmlns='http://www.w3.org/1998/Math/MathML'> <lambda> <bvar> <ci> GAP </ci> </bvar> <bvar> <ci> alphaACE </ci> </bvar> <bvar> <ci> alphaGLC </ci> </bvar> <bvar> <ci> default </ci> </bvar> <bvar> <ci> kBM_ACE_GAP </ci> </bvar> <bvar> <ci> kBM_GLC_GAP </ci> </bvar> <apply> <divide/> <apply> <times/> <apply> <plus/> <apply> <times/> <ci> alphaGLC </ci> <ci> kBM_GLC_GAP </ci> </apply> <apply> <times/> <ci> alphaACE </ci> <ci> kBM_ACE_GAP </ci> </apply> </apply> <ci> GAP </ci> </apply> <ci> default </ci> </apply> </lambda> </math> </functionDefinition> <functionDefinition id='Function_for_vBM_AcCoA' metaid='COPASI241' name='Function for vBM_AcCoA'> <math xmlns='http://www.w3.org/1998/Math/MathML'> <lambda> <bvar> <ci> AcCoA </ci> </bvar> <bvar> <ci> alphaACE </ci> </bvar> <bvar> <ci> alphaGLC </ci> </bvar> <bvar> <ci> default </ci> </bvar> <bvar> <ci> kBM_ACE_AcCoA </ci> </bvar> <bvar> <ci> kBM_GLC_AcCoA </ci> </bvar> <apply> <divide/> <apply> <times/> <apply> <plus/> <apply> <times/> <ci> alphaGLC </ci> <ci> kBM_GLC_AcCoA </ci> </apply> <apply> <times/> <ci> alphaACE </ci> <ci> kBM_ACE_AcCoA </ci> </apply> </apply> <ci> AcCoA </ci> </apply> <ci> default </ci> </apply> </lambda> </math> </functionDefinition> <functionDefinition id='Function_for_vBM_E4P' metaid='COPASI242' name='Function for vBM_E4P'> <math xmlns='http://www.w3.org/1998/Math/MathML'> <lambda> <bvar> <ci> E4P </ci> </bvar> <bvar> <ci> alphaACE </ci> </bvar> <bvar> <ci> alphaGLC </ci> </bvar> <bvar> <ci> default </ci> </bvar> <bvar> <ci> kBM_ACE_E4P </ci> </bvar> <bvar> <ci> kBM_GLC_E4P </ci> </bvar> <apply> <divide/> <apply> <times/> <apply> <plus/> <apply> <times/> <ci> alphaGLC </ci> <ci> kBM_GLC_E4P </ci> </apply> <apply> <times/> <ci> alphaACE </ci> <ci> kBM_ACE_E4P </ci> </apply> </apply> <ci> E4P </ci> </apply> <ci> default </ci> </apply> </lambda> </math> </functionDefinition> <functionDefinition id='Function_for_vE_TktA' metaid='COPASI243' name='Function for vE_TktA'> <math xmlns='http://www.w3.org/1998/Math/MathML'> <lambda> <bvar> <ci> GAP </ci> </bvar> <bvar> <ci> KTktA_eq </ci> </bvar> <bvar> <ci> R5P </ci> </bvar> <bvar> <ci> S7P </ci> </bvar> <bvar> <ci> X5P </ci> </bvar> <bvar> <ci> default </ci> </bvar> <bvar> <ci> vTktA_max </ci> </bvar> <apply> <divide/> <apply> <times/> <ci> vTktA_max </ci> <apply> <minus/> <apply> <times/> <ci> R5P </ci> <ci> X5P </ci> </apply> <apply> <divide/> <apply> <times/> <ci> S7P </ci> <ci> GAP </ci> </apply> <ci> KTktA_eq </ci> </apply> </apply> </apply> <ci> default </ci> </apply> </lambda> </math> </functionDefinition> <functionDefinition id='Function_for_vBM_G6P' metaid='COPASI244' name='Function for vBM_G6P'> <math xmlns='http://www.w3.org/1998/Math/MathML'> <lambda> <bvar> <ci> G6P </ci> </bvar> <bvar> <ci> alphaACE </ci> </bvar> <bvar> <ci> alphaGLC </ci> </bvar> <bvar> <ci> default </ci> </bvar> <bvar> <ci> kBM_ACE_G6P </ci> </bvar> <bvar> <ci> kBM_GLC_G6P </ci> </bvar> <apply> <divide/> <apply> <times/> <apply> <plus/> <apply> <times/> <ci> alphaGLC </ci> <ci> kBM_GLC_G6P </ci> </apply> <apply> <times/> <ci> alphaACE </ci> <ci> kBM_ACE_G6P </ci> </apply> </apply> <ci> G6P </ci> </apply> <ci> default </ci> </apply> </lambda> </math> </functionDefinition> <functionDefinition id='Function_for_vE_Fba' metaid='COPASI245' name='Function for vE_Fba'> <math xmlns='http://www.w3.org/1998/Math/MathML'> <lambda> <bvar> <ci> FBP </ci> </bvar> <bvar> <ci> Fba </ci> </bvar> <bvar> <ci> GAP </ci> </bvar> <bvar> <ci> KFba_DHAP </ci> </bvar> <bvar> <ci> KFba_FBP </ci> </bvar> <bvar> <ci> KFba_GAP </ci> </bvar> <bvar> <ci> KFba_GAP_inh </ci> </bvar> <bvar> <ci> KFba_eq </ci> </bvar> <bvar> <ci> VFba_blf </ci> </bvar> <bvar> <ci> default </ci> </bvar> <bvar> <ci> kFba_cat </ci> </bvar> <apply> <divide/> <apply> <divide/> <apply> <times/> <ci> Fba </ci> <ci> kFba_cat </ci> <apply> <minus/> <ci> FBP </ci> <apply> <divide/> <apply> <power/> <ci> GAP </ci> <cn type='integer'> 2 </cn> </apply> <ci> KFba_eq </ci> </apply> </apply> </apply> <apply> <plus/> <ci> KFba_FBP </ci> <ci> FBP </ci> <apply> <divide/> <apply> <times/> <ci> KFba_GAP </ci> <ci> GAP </ci> </apply> <apply> <times/> <ci> KFba_eq </ci> <ci> VFba_blf </ci> </apply> </apply> <apply> <divide/> <apply> <times/> <ci> KFba_DHAP </ci> <ci> GAP </ci> </apply> <apply> <times/> <ci> KFba_eq </ci> <ci> VFba_blf </ci> </apply> </apply> <apply> <divide/> <apply> <times/> <ci> FBP </ci> <ci> GAP </ci> </apply> <ci> KFba_GAP_inh </ci> </apply> <apply> <divide/> <apply> <power/> <ci> GAP </ci> <cn type='integer'> 2 </cn> </apply> <apply> <times/> <ci> KFba_eq </ci> <ci> VFba_blf </ci> </apply> </apply> </apply> </apply> <ci> default </ci> </apply> </lambda> </math> </functionDefinition> <functionDefinition id='Function_for_vD_CS' metaid='COPASI246' name='Function for vD_CS'> <math xmlns='http://www.w3.org/1998/Math/MathML'> <lambda> <bvar> <ci> CS </ci> </bvar> <bvar> <ci> default </ci> </bvar> <bvar> <ci> kdegr </ci> </bvar> <bvar> <ci> mu </ci> </bvar> <apply> <divide/> <apply> <times/> <apply> <plus/> <ci> mu </ci> <ci> kdegr </ci> </apply> <ci> CS </ci> </apply> <ci> default </ci> </apply> </lambda> </math> </functionDefinition> <functionDefinition id='Function_for_vD_E4P' metaid='COPASI247' name='Function for vD_E4P'> <math xmlns='http://www.w3.org/1998/Math/MathML'> <lambda> <bvar> <ci> E4P </ci> </bvar> <bvar> <ci> default </ci> </bvar> <bvar> <ci> mu </ci> </bvar> <apply> <divide/> <apply> <times/> <ci> mu </ci> <ci> E4P </ci> </apply> <ci> default </ci> </apply> </lambda> </math> </functionDefinition> <functionDefinition id='Function_for_vD_F6P' metaid='COPASI248' name='Function for vD_F6P'> <math xmlns='http://www.w3.org/1998/Math/MathML'> <lambda> <bvar> <ci> F6P </ci> </bvar> <bvar> <ci> default </ci> </bvar> <bvar> <ci> mu </ci> </bvar> <apply> <divide/> <apply> <times/> <ci> mu </ci> <ci> F6P </ci> </apply> <ci> default </ci> </apply> </lambda> </math> </functionDefinition> <functionDefinition id='Function_for_vD_FBP' metaid='COPASI249' name='Function for vD_FBP'> <math xmlns='http://www.w3.org/1998/Math/MathML'> <lambda> <bvar> <ci> FBP </ci> </bvar> <bvar> <ci> default </ci> </bvar> <bvar> <ci> mu </ci> </bvar> <apply> <divide/> <apply> <times/> <ci> mu </ci> <ci> FBP </ci> </apply> <ci> default </ci> </apply> </lambda> </math> </functionDefinition> <functionDefinition id='Function_for_vD_FUM' metaid='COPASI250' name='Function for vD_FUM'> <math xmlns='http://www.w3.org/1998/Math/MathML'> <lambda> <bvar> <ci> FUM </ci> </bvar> <bvar> <ci> default </ci> </bvar> <bvar> <ci> mu </ci> </bvar> <apply> <divide/> <apply> <times/> <ci> mu </ci> <ci> FUM </ci> </apply> <ci> default </ci> </apply> </lambda> </math> </functionDefinition> <functionDefinition id='Function_for_vD_Fba' metaid='COPASI251' name='Function for vD_Fba'> <math xmlns='http://www.w3.org/1998/Math/MathML'> <lambda> <bvar> <ci> Fba </ci> </bvar> <bvar> <ci> default </ci> </bvar> <bvar> <ci> kdegr </ci> </bvar> <bvar> <ci> mu </ci> </bvar> <apply> <divide/> <apply> <times/> <apply> <plus/> <ci> mu </ci> <ci> kdegr </ci> </apply> <ci> Fba </ci> </apply> <ci> default </ci> </apply> </lambda> </math> </functionDefinition> <functionDefinition id='Function_for_vD_Fbp' metaid='COPASI252' name='Function for vD_Fbp'> <math xmlns='http://www.w3.org/1998/Math/MathML'> <lambda> <bvar> <ci> Fbp </ci> </bvar> <bvar> <ci> default </ci> </bvar> <bvar> <ci> kdegr </ci> </bvar> <bvar> <ci> mu </ci> </bvar> <apply> <divide/> <apply> <times/> <apply> <plus/> <ci> mu </ci> <ci> kdegr </ci> </apply> <ci> Fbp </ci> </apply> <ci> default </ci> </apply> </lambda> </math> </functionDefinition> <functionDefinition id='Function_for_vD_Fum' metaid='COPASI253' name='Function for vD_Fum'> <math xmlns='http://www.w3.org/1998/Math/MathML'> <lambda> <bvar> <ci> Fum </ci> </bvar> <bvar> <ci> default </ci> </bvar> <bvar> <ci> kdegr </ci> </bvar> <bvar> <ci> mu </ci> </bvar> <apply> <divide/> <apply> <times/> <apply> <plus/> <ci> mu </ci> <ci> kdegr </ci> </apply> <ci> Fum </ci> </apply> <ci> default </ci> </apply> </lambda> </math> </functionDefinition> <functionDefinition id='Function_for_vD_G6P' metaid='COPASI254' name='Function for vD_G6P'> <math xmlns='http://www.w3.org/1998/Math/MathML'> <lambda> <bvar> <ci> G6P </ci> </bvar> <bvar> <ci> default </ci> </bvar> <bvar> <ci> mu </ci> </bvar> <apply> <divide/> <apply> <times/> <ci> mu </ci> <ci> G6P </ci> </apply> <ci> default </ci> </apply> </lambda> </math> </functionDefinition> <functionDefinition id='Function_for_vD_GAP' metaid='COPASI255' name='Function for vD_GAP'> <math xmlns='http://www.w3.org/1998/Math/MathML'> <lambda> <bvar> <ci> GAP </ci> </bvar> <bvar> <ci> default </ci> </bvar> <bvar> <ci> mu </ci> </bvar> <apply> <divide/> <apply> <times/> <ci> mu </ci> <ci> GAP </ci> </apply> <ci> default </ci> </apply> </lambda> </math> </functionDefinition> <functionDefinition id='Function_for_vD_GAPDH' metaid='COPASI256' name='Function for vD_GAPDH'> <math xmlns='http://www.w3.org/1998/Math/MathML'> <lambda> <bvar> <ci> GAPDH </ci> </bvar> <bvar> <ci> default </ci> </bvar> <bvar> <ci> kdegr </ci> </bvar> <bvar> <ci> mu </ci> </bvar> <apply> <divide/> <apply> <times/> <apply> <plus/> <ci> mu </ci> <ci> kdegr </ci> </apply> <ci> GAPDH </ci> </apply> <ci> default </ci> </apply> </lambda> </math> </functionDefinition> <functionDefinition id='Function_for_vD_GLC' metaid='COPASI257' name='Function for vD_GLC'> <math xmlns='http://www.w3.org/1998/Math/MathML'> <lambda> <bvar> <ci> GLC </ci> </bvar> <bvar> <ci> default </ci> </bvar> <bvar> <ci> mu </ci> </bvar> <apply> <divide/> <apply> <times/> <ci> mu </ci> <ci> GLC </ci> </apply> <ci> default </ci> </apply> </lambda> </math> </functionDefinition> <functionDefinition id='Function_for_vD_GLCex' metaid='COPASI258' name='Function for vD_GLCex'> <math xmlns='http://www.w3.org/1998/Math/MathML'> <lambda> <bvar> <ci> D </ci> </bvar> <bvar> <ci> GLCex </ci> </bvar> <bvar> <ci> default </ci> </bvar> <apply> <divide/> <apply> <times/> <ci> D </ci> <ci> GLCex </ci> </apply> <ci> default </ci> </apply> </lambda> </math> </functionDefinition> </listOfFunctionDefinitions> <listOfUnitDefinitions> <unitDefinition id='length' name='length'> <listOfUnits> <unit exponent='1' kind='metre' multiplier='1' scale='0'/> </listOfUnits> </unitDefinition> <unitDefinition id='area' name='area'> <listOfUnits> <unit exponent='2' kind='metre' multiplier='1' scale='0'/> </listOfUnits> </unitDefinition> <unitDefinition id='volume' name='volume'> <listOfUnits> <unit exponent='1' kind='litre' multiplier='1' scale='0'/> </listOfUnits> </unitDefinition> <unitDefinition id='time' name='time'> <listOfUnits> <unit exponent='1' kind='second' multiplier='3600' scale='0'/> </listOfUnits> </unitDefinition> <unitDefinition id='substance' name='substance'> <listOfUnits> <unit exponent='1' kind='mole' multiplier='1' scale='-3'/> </listOfUnits> </unitDefinition> </listOfUnitDefinitions> <listOfCompartments> <compartment constant='true' id='default' metaid='metaid_0' name='default' sboTerm='SBO:0000410' size='1' spatialDimensions='3' units='volume'/> </listOfCompartments> <listOfSpecies> <species boundaryCondition='false' compartment='default' constant='false' hasOnlySubstanceUnits='false' id='ACEex' initialConcentration='2.310669e-010' metaid='metaid_1' name='ACEex' substanceUnits='substance'> <annotation> <COPASI xmlns='http://www.copasi.org/static/sbml'> <rdf:RDF xmlns:CopasiMT='http://www.copasi.org/RDF/MiriamTerms#' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#'> <rdf:Description rdf:about='#metaid_1'> <CopasiMT:is> <rdf:Bag> <rdf:li rdf:resource='http://identifiers.org/kegg.compound/C00033'/> </rdf:Bag> </CopasiMT:is> </rdf:Description> </rdf:RDF> </COPASI> <rdf:RDF xmlns:bqbiol='http://biomodels.net/biology-qualifiers/' xmlns:bqmodel='http://biomodels.net/model-qualifiers/' xmlns:dc='http://purl.org/dc/elements/1.1/' xmlns:dcterms='http://purl.org/dc/terms/' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#' xmlns:vCard='http://www.w3.org/2001/vcard-rdf/3.0#'> <rdf:Description rdf:about='#metaid_1'> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource='http://identifiers.org/kegg.compound/C00033'/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </species> <species boundaryCondition='false' compartment='default' constant='false' hasOnlySubstanceUnits='false' id='AcCoA' initialConcentration='0.5627338' metaid='metaid_2' name='AcCoA' substanceUnits='substance'> <annotation> <COPASI xmlns='http://www.copasi.org/static/sbml'> <rdf:RDF xmlns:CopasiMT='http://www.copasi.org/RDF/MiriamTerms#' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#'> <rdf:Description rdf:about='#metaid_2'> <CopasiMT:is> <rdf:Bag> <rdf:li rdf:resource='http://identifiers.org/kegg.compound/C00024'/> </rdf:Bag> </CopasiMT:is> </rdf:Description> </rdf:RDF> </COPASI> <rdf:RDF xmlns:bqbiol='http://biomodels.net/biology-qualifiers/' xmlns:bqmodel='http://biomodels.net/model-qualifiers/' xmlns:dc='http://purl.org/dc/elements/1.1/' xmlns:dcterms='http://purl.org/dc/terms/' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#' xmlns:vCard='http://www.w3.org/2001/vcard-rdf/3.0#'> <rdf:Description rdf:about='#metaid_2'> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource='http://identifiers.org/kegg.compound/C00024'/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </species> <species boundaryCondition='false' compartment='default' constant='false' hasOnlySubstanceUnits='false' id='AcP' initialConcentration='0.03239065' metaid='metaid_3' name='AcP' substanceUnits='substance'> <annotation> <COPASI xmlns='http://www.copasi.org/static/sbml'> <rdf:RDF xmlns:CopasiMT='http://www.copasi.org/RDF/MiriamTerms#' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#'> <rdf:Description rdf:about='#metaid_3'> <CopasiMT:is> <rdf:Bag> <rdf:li rdf:resource='http://identifiers.org/kegg.compound/C00227'/> </rdf:Bag> </CopasiMT:is> </rdf:Description> </rdf:RDF> </COPASI> <rdf:RDF xmlns:bqbiol='http://biomodels.net/biology-qualifiers/' xmlns:bqmodel='http://biomodels.net/model-qualifiers/' xmlns:dc='http://purl.org/dc/elements/1.1/' xmlns:dcterms='http://purl.org/dc/terms/' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#' xmlns:vCard='http://www.w3.org/2001/vcard-rdf/3.0#'> <rdf:Description rdf:about='#metaid_3'> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource='http://identifiers.org/kegg.compound/C00227'/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </species> <species boundaryCondition='false' compartment='default' constant='false' hasOnlySubstanceUnits='false' id='AceK' initialConcentration='0.0009487349' metaid='metaid_4' name='AceK' substanceUnits='substance'> <annotation> <COPASI xmlns='http://www.copasi.org/static/sbml'> <rdf:RDF xmlns:CopasiMT='http://www.copasi.org/RDF/MiriamTerms#' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#'> <rdf:Description rdf:about='#metaid_4'> <CopasiMT:isEncodedBy> <rdf:Bag> <rdf:li rdf:resource='http://identifiers.org/kegg.genes/eco:b4016'/> </rdf:Bag> </CopasiMT:isEncodedBy> </rdf:Description> </rdf:RDF> </COPASI> <rdf:RDF xmlns:bqbiol='http://biomodels.net/biology-qualifiers/' xmlns:bqmodel='http://biomodels.net/model-qualifiers/' xmlns:dc='http://purl.org/dc/elements/1.1/' xmlns:dcterms='http://purl.org/dc/terms/' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#' xmlns:vCard='http://www.w3.org/2001/vcard-rdf/3.0#'> <rdf:Description rdf:about='#metaid_4'> <bqbiol:isEncodedBy> <rdf:Bag> <rdf:li rdf:resource='http://identifiers.org/kegg.genes/eco:b4016'/> </rdf:Bag> </bqbiol:isEncodedBy> </rdf:Description> </rdf:RDF> </annotation> </species> <species boundaryCondition='false' compartment='default' constant='false' hasOnlySubstanceUnits='false' id='Acs' initialConcentration='0.001693883' metaid='metaid_5' name='Acs' substanceUnits='substance'> <annotation> <COPASI xmlns='http://www.copasi.org/static/sbml'> <rdf:RDF xmlns:CopasiMT='http://www.copasi.org/RDF/MiriamTerms#' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#'> <rdf:Description rdf:about='#metaid_5'> <CopasiMT:isEncodedBy> <rdf:Bag> <rdf:li rdf:resource='http://identifiers.org/kegg.genes/eco:b4069'/> </rdf:Bag> </CopasiMT:isEncodedBy> </rdf:Description> </rdf:RDF> </COPASI> <rdf:RDF xmlns:bqbiol='http://biomodels.net/biology-qualifiers/' xmlns:bqmodel='http://biomodels.net/model-qualifiers/' xmlns:dc='http://purl.org/dc/elements/1.1/' xmlns:dcterms='http://purl.org/dc/terms/' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#' xmlns:vCard='http://www.w3.org/2001/vcard-rdf/3.0#'> <rdf:Description rdf:about='#metaid_5'> <bqbiol:isEncodedBy> <rdf:Bag> <rdf:li rdf:resource='http://identifiers.org/kegg.genes/eco:b4069'/> </rdf:Bag> </bqbiol:isEncodedBy> </rdf:Description> </rdf:RDF> </annotation> </species> <species boundaryCondition='false' compartment='default' constant='false' hasOnlySubstanceUnits='false' id='CS' initialConcentration='0.01107911' metaid='metaid_6' name='CS' substanceUnits='substance'> <annotation> <COPASI xmlns='http://www.copasi.org/static/sbml'> <rdf:RDF xmlns:CopasiMT='http://www.copasi.org/RDF/MiriamTerms#' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#'> <rdf:Description rdf:about='#metaid_6'> <CopasiMT:isEncodedBy> <rdf:Bag> <rdf:li rdf:resource='http://identifiers.org/kegg.genes/eco:b0720'/> </rdf:Bag> </CopasiMT:isEncodedBy> </rdf:Description> </rdf:RDF> </COPASI> <rdf:RDF xmlns:bqbiol='http://biomodels.net/biology-qualifiers/' xmlns:bqmodel='http://biomodels.net/model-qualifiers/' xmlns:dc='http://purl.org/dc/elements/1.1/' xmlns:dcterms='http://purl.org/dc/terms/' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#' xmlns:vCard='http://www.w3.org/2001/vcard-rdf/3.0#'> <rdf:Description rdf:about='#metaid_6'> <bqbiol:isEncodedBy> <rdf:Bag> <rdf:li rdf:resource='http://identifiers.org/kegg.genes/eco:b0720'/> </rdf:Bag> </bqbiol:isEncodedBy> </rdf:Description> </rdf:RDF> </annotation> </species> <species boundaryCondition='false' compartment='default' constant='false' hasOnlySubstanceUnits='false' id='E4P' initialConcentration='0.0203329' metaid='metaid_7' name='E4P' substanceUnits='substance'> <annotation> <COPASI xmlns='http://www.copasi.org/static/sbml'> <rdf:RDF xmlns:CopasiMT='http://www.copasi.org/RDF/MiriamTerms#' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#'> <rdf:Description rdf:about='#metaid_7'> <CopasiMT:is> <rdf:Bag> <rdf:li rdf:resource='http://identifiers.org/kegg.compound/C00279'/> </rdf:Bag> </CopasiMT:is> </rdf:Description> </rdf:RDF> </COPASI> <rdf:RDF xmlns:bqbiol='http://biomodels.net/biology-qualifiers/' xmlns:bqmodel='http://biomodels.net/model-qualifiers/' xmlns:dc='http://purl.org/dc/elements/1.1/' xmlns:dcterms='http://purl.org/dc/terms/' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#' xmlns:vCard='http://www.w3.org/2001/vcard-rdf/3.0#'> <rdf:Description rdf:about='#metaid_7'> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource='http://identifiers.org/kegg.compound/C00279'/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </species> <species boundaryCondition='false' compartment='default' constant='false' hasOnlySubstanceUnits='false' id='EIIAP' initialConcentration='0.01996148' metaid='metaid_8' name='EIIAP' substanceUnits='substance'> <annotation> <COPASI xmlns='http://www.copasi.org/static/sbml'> <rdf:RDF xmlns:CopasiMT='http://www.copasi.org/RDF/MiriamTerms#' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#'> <rdf:Description rdf:about='#metaid_8'> <CopasiMT:isEncodedBy> <rdf:Bag> <rdf:li rdf:resource='http://identifiers.org/kegg.genes/eco:b2417'/> </rdf:Bag> </CopasiMT:isEncodedBy> </rdf:Description> </rdf:RDF> </COPASI> <rdf:RDF xmlns:bqbiol='http://biomodels.net/biology-qualifiers/' xmlns:bqmodel='http://biomodels.net/model-qualifiers/' xmlns:dc='http://purl.org/dc/elements/1.1/' xmlns:dcterms='http://purl.org/dc/terms/' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#' xmlns:vCard='http://www.w3.org/2001/vcard-rdf/3.0#'> <rdf:Description rdf:about='#metaid_8'> <bqbiol:isEncodedBy> <rdf:Bag> <rdf:li rdf:resource='http://identifiers.org/kegg.genes/eco:b2417'/> </rdf:Bag> </bqbiol:isEncodedBy> </rdf:Description> </rdf:RDF> </annotation> </species> <species boundaryCondition='false' compartment='default' constant='false' hasOnlySubstanceUnits='false' id='F6P' initialConcentration='0.5402474' metaid='metaid_9' name='F6P' substanceUnits='substance'> <annotation> <COPASI xmlns='http://www.copasi.org/static/sbml'> <rdf:RDF xmlns:CopasiMT='http://www.copasi.org/RDF/MiriamTerms#' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#'> <rdf:Description rdf:about='#metaid_9'> <CopasiMT:is> <rdf:Bag> <rdf:li rdf:resource='http://identifiers.org/kegg.compound/C05345'/> </rdf:Bag> </CopasiMT:is> </rdf:Description> </rdf:RDF> </COPASI> <rdf:RDF xmlns:bqbiol='http://biomodels.net/biology-qualifiers/' xmlns:bqmodel='http://biomodels.net/model-qualifiers/' xmlns:dc='http://purl.org/dc/elements/1.1/' xmlns:dcterms='http://purl.org/dc/terms/' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#' xmlns:vCard='http://www.w3.org/2001/vcard-rdf/3.0#'> <rdf:Description rdf:about='#metaid_9'> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource='http://identifiers.org/kegg.compound/C05345'/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </species> <species boundaryCondition='false' compartment='default' constant='false' hasOnlySubstanceUnits='false' id='FBP' initialConcentration='0.04231032' metaid='metaid_10' name='FBP' substanceUnits='substance'> <annotation> <COPASI xmlns='http://www.copasi.org/static/sbml'> <rdf:RDF xmlns:CopasiMT='http://www.copasi.org/RDF/MiriamTerms#' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#'> <rdf:Description rdf:about='#metaid_10'> <CopasiMT:is> <rdf:Bag> <rdf:li rdf:resource='http://identifiers.org/kegg.compound/C05378'/> </rdf:Bag> </CopasiMT:is> </rdf:Description> </rdf:RDF> </COPASI> <rdf:RDF xmlns:bqbiol='http://biomodels.net/biology-qualifiers/' xmlns:bqmodel='http://biomodels.net/model-qualifiers/' xmlns:dc='http://purl.org/dc/elements/1.1/' xmlns:dcterms='http://purl.org/dc/terms/' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#' xmlns:vCard='http://www.w3.org/2001/vcard-rdf/3.0#'> <rdf:Description rdf:about='#metaid_10'> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource='http://identifiers.org/kegg.compound/C05378'/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </species> <species boundaryCondition='false' compartment='default' constant='false' hasOnlySubstanceUnits='false' id='FUM' initialConcentration='0.04470416' metaid='metaid_11' name='FUM' substanceUnits='substance'> <annotation> <COPASI xmlns='http://www.copasi.org/static/sbml'> <rdf:RDF xmlns:CopasiMT='http://www.copasi.org/RDF/MiriamTerms#' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#'> <rdf:Description rdf:about='#metaid_11'> <CopasiMT:is> <rdf:Bag> <rdf:li rdf:resource='http://identifiers.org/kegg.compound/C00122'/> </rdf:Bag> </CopasiMT:is> </rdf:Description> </rdf:RDF> </COPASI> <rdf:RDF xmlns:bqbiol='http://biomodels.net/biology-qualifiers/' xmlns:bqmodel='http://biomodels.net/model-qualifiers/' xmlns:dc='http://purl.org/dc/elements/1.1/' xmlns:dcterms='http://purl.org/dc/terms/' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#' xmlns:vCard='http://www.w3.org/2001/vcard-rdf/3.0#'> <rdf:Description rdf:about='#metaid_11'> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource='http://identifiers.org/kegg.compound/C00122'/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </species> <species boundaryCondition='false' compartment='default' constant='false' hasOnlySubstanceUnits='false' id='Fba' initialConcentration='0.1472042' metaid='metaid_12' name='Fba' substanceUnits='substance'> <annotation> <COPASI xmlns='http://www.copasi.org/static/sbml'> <rdf:RDF xmlns:CopasiMT='http://www.copasi.org/RDF/MiriamTerms#' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#'> <rdf:Description rdf:about='#metaid_12'> <CopasiMT:isEncodedBy> <rdf:Bag> <rdf:li rdf:resource='http://identifiers.org/kegg.genes/eco:b2925'/> </rdf:Bag> </CopasiMT:isEncodedBy> </rdf:Description> </rdf:RDF> </COPASI> <rdf:RDF xmlns:bqbiol='http://biomodels.net/biology-qualifiers/' xmlns:bqmodel='http://biomodels.net/model-qualifiers/' xmlns:dc='http://purl.org/dc/elements/1.1/' xmlns:dcterms='http://purl.org/dc/terms/' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#' xmlns:vCard='http://www.w3.org/2001/vcard-rdf/3.0#'> <rdf:Description rdf:about='#metaid_12'> <bqbiol:isEncodedBy> <rdf:Bag> <rdf:li rdf:resource='http://identifiers.org/kegg.genes/eco:b2925'/> </rdf:Bag> </bqbiol:isEncodedBy> </rdf:Description> </rdf:RDF> </annotation> </species> <species boundaryCondition='false' compartment='default' constant='false' hasOnlySubstanceUnits='false' id='Fbp' initialConcentration='0.004967894' metaid='metaid_13' name='Fbp' substanceUnits='substance'> <annotation> <COPASI xmlns='http://www.copasi.org/static/sbml'> <rdf:RDF xmlns:CopasiMT='http://www.copasi.org/RDF/MiriamTerms#' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#'> <rdf:Description rdf:about='#metaid_13'> <CopasiMT:is> <rdf:Bag> <rdf:li rdf:resource='http://identifiers.org/kegg.genes/eco:b4232'/> </rdf:Bag> </CopasiMT:is> </rdf:Description> </rdf:RDF> </COPASI> <rdf:RDF xmlns:bqbiol='http://biomodels.net/biology-qualifiers/' xmlns:bqmodel='http://biomodels.net/model-qualifiers/' xmlns:dc='http://purl.org/dc/elements/1.1/' xmlns:dcterms='http://purl.org/dc/terms/' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#' xmlns:vCard='http://www.w3.org/2001/vcard-rdf/3.0#'> <rdf:Description rdf:about='#metaid_13'> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource='http://identifiers.org/kegg.genes/eco:b4232'/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </species> <species boundaryCondition='false' compartment='default' constant='false' hasOnlySubstanceUnits='false' id='Fum' initialConcentration='0.02091922' metaid='metaid_14' name='Fum' substanceUnits='substance'> <annotation> <COPASI xmlns='http://www.copasi.org/static/sbml'> <rdf:RDF xmlns:CopasiMT='http://www.copasi.org/RDF/MiriamTerms#' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#'> <rdf:Description rdf:about='#metaid_14'> <CopasiMT:isEncodedBy> <rdf:Bag> <rdf:li rdf:resource='http://identifiers.org/kegg.genes/eco:b1612'/> </rdf:Bag> </CopasiMT:isEncodedBy> <CopasiMT:isEncodedBy> <rdf:Bag> <rdf:li rdf:resource='http://identifiers.org/kegg.genes/eco:b1611'/> </rdf:Bag> </CopasiMT:isEncodedBy> <CopasiMT:isEncodedBy> <rdf:Bag> <rdf:li rdf:resource='http://identifiers.org/kegg.genes/eco:b4122'/> </rdf:Bag> </CopasiMT:isEncodedBy> </rdf:Description> </rdf:RDF> </COPASI> <rdf:RDF xmlns:bqbiol='http://biomodels.net/biology-qualifiers/' xmlns:bqmodel='http://biomodels.net/model-qualifiers/' xmlns:dc='http://purl.org/dc/elements/1.1/' xmlns:dcterms='http://purl.org/dc/terms/' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#' xmlns:vCard='http://www.w3.org/2001/vcard-rdf/3.0#'> <rdf:Description rdf:about='#metaid_14'> <bqbiol:isEncodedBy> <rdf:Bag> <rdf:li rdf:resource='http://identifiers.org/kegg.genes/eco:b4122'/> </rdf:Bag> </bqbiol:isEncodedBy> <bqbiol:isEncodedBy> <rdf:Bag> <rdf:li rdf:resource='http://identifiers.org/kegg.genes/eco:b1611'/> </rdf:Bag> </bqbiol:isEncodedBy> <bqbiol:isEncodedBy> <rdf:Bag> <rdf:li rdf:resource='http://identifiers.org/kegg.genes/eco:b1612'/> </rdf:Bag> </bqbiol:isEncodedBy> </rdf:Description> </rdf:RDF> </annotation> </species> <species boundaryCondition='false' compartment='default' constant='false' hasOnlySubstanceUnits='false' id='G6P' initialConcentration='0.3817941' metaid='metaid_15' name='G6P' substanceUnits='substance'> <annotation> <COPASI xmlns='http://www.copasi.org/static/sbml'> <rdf:RDF xmlns:CopasiMT='http://www.copasi.org/RDF/MiriamTerms#' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#'> <rdf:Description rdf:about='#metaid_15'> <CopasiMT:is> <rdf:Bag> <rdf:li rdf:resource='http://identifiers.org/kegg.compound/C00668'/> </rdf:Bag> </CopasiMT:is> </rdf:Description> </rdf:RDF> </COPASI> <rdf:RDF xmlns:bqbiol='http://biomodels.net/biology-qualifiers/' xmlns:bqmodel='http://biomodels.net/model-qualifiers/' xmlns:dc='http://purl.org/dc/elements/1.1/' xmlns:dcterms='http://purl.org/dc/terms/' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#' xmlns:vCard='http://www.w3.org/2001/vcard-rdf/3.0#'> <rdf:Description rdf:about='#metaid_15'> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource='http://identifiers.org/kegg.compound/C00668'/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </species> <species boundaryCondition='false' compartment='default' constant='false' hasOnlySubstanceUnits='false' id='GAP' initialConcentration='0.1245678' metaid='metaid_16' name='GAP' substanceUnits='substance'> <annotation> <COPASI xmlns='http://www.copasi.org/static/sbml'> <rdf:RDF xmlns:CopasiMT='http://www.copasi.org/RDF/MiriamTerms#' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#'> <rdf:Description rdf:about='#metaid_16'> <CopasiMT:is> <rdf:Bag> <rdf:li rdf:resource='http://identifiers.org/kegg.compound/C00118'/> </rdf:Bag> </CopasiMT:is> </rdf:Description> </rdf:RDF> </COPASI> <rdf:RDF xmlns:bqbiol='http://biomodels.net/biology-qualifiers/' xmlns:bqmodel='http://biomodels.net/model-qualifiers/' xmlns:dc='http://purl.org/dc/elements/1.1/' xmlns:dcterms='http://purl.org/dc/terms/' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#' xmlns:vCard='http://www.w3.org/2001/vcard-rdf/3.0#'> <rdf:Description rdf:about='#metaid_16'> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource='http://identifiers.org/kegg.compound/C00118'/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </species> <species boundaryCondition='false' compartment='default' constant='false' hasOnlySubstanceUnits='false' id='GAPDH' initialConcentration='0.1220095' metaid='metaid_17' name='GAPDH' substanceUnits='substance'> <annotation> <COPASI xmlns='http://www.copasi.org/static/sbml'> <rdf:RDF xmlns:CopasiMT='http://www.copasi.org/RDF/MiriamTerms#' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#'> <rdf:Description rdf:about='#metaid_17'> <CopasiMT:isEncodedBy> <rdf:Bag> <rdf:li rdf:resource='http://identifiers.org/kegg.genes/eco:b1779'/> </rdf:Bag> </CopasiMT:isEncodedBy> </rdf:Description> </rdf:RDF> </COPASI> <rdf:RDF xmlns:bqbiol='http://biomodels.net/biology-qualifiers/' xmlns:bqmodel='http://biomodels.net/model-qualifiers/' xmlns:dc='http://purl.org/dc/elements/1.1/' xmlns:dcterms='http://purl.org/dc/terms/' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#' xmlns:vCard='http://www.w3.org/2001/vcard-rdf/3.0#'> <rdf:Description rdf:about='#metaid_17'> <bqbiol:isEncodedBy> <rdf:Bag> <rdf:li rdf:resource='http://identifiers.org/kegg.genes/eco:b1779'/> </rdf:Bag> </bqbiol:isEncodedBy> </rdf:Description> </rdf:RDF> </annotation> </species> <species boundaryCondition='false' compartment='default' constant='false' hasOnlySubstanceUnits='false' id='GLC' initialConcentration='0.006651796' metaid='metaid_18' name='GLC' substanceUnits='substance'> <annotation> <COPASI xmlns='http://www.copasi.org/static/sbml'> <rdf:RDF xmlns:CopasiMT='http://www.copasi.org/RDF/MiriamTerms#' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#'> <rdf:Description rdf:about='#metaid_18'> <CopasiMT:is> <rdf:Bag> <rdf:li rdf:resource='http://identifiers.org/kegg.compound/C00267'/> </rdf:Bag> </CopasiMT:is> </rdf:Description> </rdf:RDF> </COPASI> <rdf:RDF xmlns:bqbiol='http://biomodels.net/biology-qualifiers/' xmlns:bqmodel='http://biomodels.net/model-qualifiers/' xmlns:dc='http://purl.org/dc/elements/1.1/' xmlns:dcterms='http://purl.org/dc/terms/' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#' xmlns:vCard='http://www.w3.org/2001/vcard-rdf/3.0#'> <rdf:Description rdf:about='#metaid_18'> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource='http://identifiers.org/kegg.compound/C00267'/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </species> <species boundaryCondition='false' compartment='default' constant='false' hasOnlySubstanceUnits='false' id='GLCex' initialConcentration='22.22222' metaid='metaid_19' name='GLCex' substanceUnits='substance'> <annotation> <COPASI xmlns='http://www.copasi.org/static/sbml'> <rdf:RDF xmlns:CopasiMT='http://www.copasi.org/RDF/MiriamTerms#' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#'> <rdf:Description rdf:about='#metaid_19'> <CopasiMT:is> <rdf:Bag> <rdf:li rdf:resource='http://identifiers.org/kegg.compound/C00267'/> </rdf:Bag> </CopasiMT:is> </rdf:Description> </rdf:RDF> </COPASI> <rdf:RDF xmlns:bqbiol='http://biomodels.net/biology-qualifiers/' xmlns:bqmodel='http://biomodels.net/model-qualifiers/' xmlns:dc='http://purl.org/dc/elements/1.1/' xmlns:dcterms='http://purl.org/dc/terms/' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#' xmlns:vCard='http://www.w3.org/2001/vcard-rdf/3.0#'> <rdf:Description rdf:about='#metaid_19'> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource='http://identifiers.org/kegg.compound/C00267'/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </species> <species boundaryCondition='false' compartment='default' constant='false' hasOnlySubstanceUnits='false' id='GLCfeed' initialConcentration='0' metaid='metaid_20' name='GLCfeed' substanceUnits='substance'> <annotation> <COPASI xmlns='http://www.copasi.org/static/sbml'> <rdf:RDF xmlns:CopasiMT='http://www.copasi.org/RDF/MiriamTerms#' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#'> <rdf:Description rdf:about='#metaid_20'> <CopasiMT:is> <rdf:Bag> <rdf:li rdf:resource='http://identifiers.org/kegg.compound/C00267'/> </rdf:Bag> </CopasiMT:is> </rdf:Description> </rdf:RDF> </COPASI> <rdf:RDF xmlns:bqbiol='http://biomodels.net/biology-qualifiers/' xmlns:bqmodel='http://biomodels.net/model-qualifiers/' xmlns:dc='http://purl.org/dc/elements/1.1/' xmlns:dcterms='http://purl.org/dc/terms/' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#' xmlns:vCard='http://www.w3.org/2001/vcard-rdf/3.0#'> <rdf:Description rdf:about='#metaid_20'> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource='http://identifiers.org/kegg.compound/C00267'/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </species> <species boundaryCondition='false' compartment='default' constant='false' hasOnlySubstanceUnits='false' id='GOX' initialConcentration='0.0001220136' metaid='metaid_21' name='GOX' substanceUnits='substance'> <annotation> <COPASI xmlns='http://www.copasi.org/static/sbml'> <rdf:RDF xmlns:CopasiMT='http://www.copasi.org/RDF/MiriamTerms#' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#'> <rdf:Description rdf:about='#metaid_21'> <CopasiMT:is> <rdf:Bag> <rdf:li rdf:resource='http://identifiers.org/kegg.compound/C00048'/> </rdf:Bag> </CopasiMT:is> </rdf:Description> </rdf:RDF> </COPASI> <rdf:RDF xmlns:bqbiol='http://biomodels.net/biology-qualifiers/' xmlns:bqmodel='http://biomodels.net/model-qualifiers/' xmlns:dc='http://purl.org/dc/elements/1.1/' xmlns:dcterms='http://purl.org/dc/terms/' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#' xmlns:vCard='http://www.w3.org/2001/vcard-rdf/3.0#'> <rdf:Description rdf:about='#metaid_21'> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource='http://identifiers.org/kegg.compound/C00048'/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </species> <species boundaryCondition='false' compartment='default' constant='false' hasOnlySubstanceUnits='false' id='Glk' initialConcentration='0.00767634' metaid='metaid_22' name='Glk' substanceUnits='substance'> <annotation> <COPASI xmlns='http://www.copasi.org/static/sbml'> <rdf:RDF xmlns:CopasiMT='http://www.copasi.org/RDF/MiriamTerms#' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#'> <rdf:Description rdf:about='#metaid_22'> <CopasiMT:isEncodedBy> <rdf:Bag> <rdf:li rdf:resource='http://identifiers.org/kegg.genes/eco:b2388'/> </rdf:Bag> </CopasiMT:isEncodedBy> </rdf:Description> </rdf:RDF> </COPASI> <rdf:RDF xmlns:bqbiol='http://biomodels.net/biology-qualifiers/' xmlns:bqmodel='http://biomodels.net/model-qualifiers/' xmlns:dc='http://purl.org/dc/elements/1.1/' xmlns:dcterms='http://purl.org/dc/terms/' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#' xmlns:vCard='http://www.w3.org/2001/vcard-rdf/3.0#'> <rdf:Description rdf:about='#metaid_22'> <bqbiol:isEncodedBy> <rdf:Bag> <rdf:li rdf:resource='http://identifiers.org/kegg.genes/eco:b2388'/> </rdf:Bag> </bqbiol:isEncodedBy> </rdf:Description> </rdf:RDF> </annotation> </species> <species boundaryCondition='false' compartment='default' constant='false' hasOnlySubstanceUnits='false' id='ICDH' initialConcentration='0.01310106' metaid='metaid_23' name='ICDH' substanceUnits='substance'> <annotation> <COPASI xmlns='http://www.copasi.org/static/sbml'> <rdf:RDF xmlns:CopasiMT='http://www.copasi.org/RDF/MiriamTerms#' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#'> <rdf:Description rdf:about='#metaid_23'> <CopasiMT:isEncodedBy> <rdf:Bag> <rdf:li rdf:resource='http://identifiers.org/kegg.genes/eco:b1136'/> </rdf:Bag> </CopasiMT:isEncodedBy> </rdf:Description> </rdf:RDF> </COPASI> <rdf:RDF xmlns:bqbiol='http://biomodels.net/biology-qualifiers/' xmlns:bqmodel='http://biomodels.net/model-qualifiers/' xmlns:dc='http://purl.org/dc/elements/1.1/' xmlns:dcterms='http://purl.org/dc/terms/' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#' xmlns:vCard='http://www.w3.org/2001/vcard-rdf/3.0#'> <rdf:Description rdf:about='#metaid_23'> <bqbiol:isEncodedBy> <rdf:Bag> <rdf:li rdf:resource='http://identifiers.org/kegg.genes/eco:b1136'/> </rdf:Bag> </bqbiol:isEncodedBy> </rdf:Description> </rdf:RDF> </annotation> </species> <species boundaryCondition='false' compartment='default' constant='false' hasOnlySubstanceUnits='false' id='ICDHP' initialConcentration='0.06787164' metaid='metaid_24' name='ICDHP' substanceUnits='substance'> <annotation> <COPASI xmlns='http://www.copasi.org/static/sbml'> <rdf:RDF xmlns:CopasiMT='http://www.copasi.org/RDF/MiriamTerms#' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#'> <rdf:Description rdf:about='#metaid_24'> <CopasiMT:isEncodedBy> <rdf:Bag> <rdf:li rdf:resource='http://identifiers.org/kegg.genes/eco:b1136'/> </rdf:Bag> </CopasiMT:isEncodedBy> </rdf:Description> </rdf:RDF> </COPASI> <rdf:RDF xmlns:bqbiol='http://biomodels.net/biology-qualifiers/' xmlns:bqmodel='http://biomodels.net/model-qualifiers/' xmlns:dc='http://purl.org/dc/elements/1.1/' xmlns:dcterms='http://purl.org/dc/terms/' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#' xmlns:vCard='http://www.w3.org/2001/vcard-rdf/3.0#'> <rdf:Description rdf:about='#metaid_24'> <bqbiol:isEncodedBy> <rdf:Bag> <rdf:li rdf:resource='http://identifiers.org/kegg.genes/eco:b1136'/> </rdf:Bag> </bqbiol:isEncodedBy> </rdf:Description> </rdf:RDF> </annotation> </species> <species boundaryCondition='false' compartment='default' constant='false' hasOnlySubstanceUnits='false' id='ICIT' initialConcentration='0.5807985' metaid='metaid_25' name='ICIT' substanceUnits='substance'> <annotation> <COPASI xmlns='http://www.copasi.org/static/sbml'> <rdf:RDF xmlns:CopasiMT='http://www.copasi.org/RDF/MiriamTerms#' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#'> <rdf:Description rdf:about='#metaid_25'> <CopasiMT:is> <rdf:Bag> <rdf:li rdf:resource='http://identifiers.org/kegg.compound/C00311'/> </rdf:Bag> </CopasiMT:is> </rdf:Description> </rdf:RDF> </COPASI> <rdf:RDF xmlns:bqbiol='http://biomodels.net/biology-qualifiers/' xmlns:bqmodel='http://biomodels.net/model-qualifiers/' xmlns:dc='http://purl.org/dc/elements/1.1/' xmlns:dcterms='http://purl.org/dc/terms/' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#' xmlns:vCard='http://www.w3.org/2001/vcard-rdf/3.0#'> <rdf:Description rdf:about='#metaid_25'> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource='http://identifiers.org/kegg.compound/C00311'/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </species> <species boundaryCondition='false' compartment='default' constant='false' hasOnlySubstanceUnits='false' id='Icl' initialConcentration='0.05517095' metaid='metaid_26' name='Icl' substanceUnits='substance'> <annotation> <COPASI xmlns='http://www.copasi.org/static/sbml'> <rdf:RDF xmlns:CopasiMT='http://www.copasi.org/RDF/MiriamTerms#' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#'> <rdf:Description rdf:about='#metaid_26'> <CopasiMT:isEncodedBy> <rdf:Bag> <rdf:li rdf:resource='http://identifiers.org/kegg.genes/eco:aceA'/> </rdf:Bag> </CopasiMT:isEncodedBy> </rdf:Description> </rdf:RDF> </COPASI> <rdf:RDF xmlns:bqbiol='http://biomodels.net/biology-qualifiers/' xmlns:bqmodel='http://biomodels.net/model-qualifiers/' xmlns:dc='http://purl.org/dc/elements/1.1/' xmlns:dcterms='http://purl.org/dc/terms/' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#' xmlns:vCard='http://www.w3.org/2001/vcard-rdf/3.0#'> <rdf:Description rdf:about='#metaid_26'> <bqbiol:isEncodedBy> <rdf:Bag> <rdf:li rdf:resource='http://identifiers.org/kegg.genes/eco:aceA'/> </rdf:Bag> </bqbiol:isEncodedBy> </rdf:Description> </rdf:RDF> </annotation> </species> <species boundaryCondition='false' compartment='default' constant='false' hasOnlySubstanceUnits='false' id='KDPG' initialConcentration='0.3460037' metaid='metaid_27' name='KDPG' substanceUnits='substance'> <annotation> <COPASI xmlns='http://www.copasi.org/static/sbml'> <rdf:RDF xmlns:CopasiMT='http://www.copasi.org/RDF/MiriamTerms#' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#'> <rdf:Description rdf:about='#metaid_27'> <CopasiMT:is> <rdf:Bag> <rdf:li rdf:resource='http://identifiers.org/kegg.compound/C04442'/> </rdf:Bag> </CopasiMT:is> </rdf:Description> </rdf:RDF> </COPASI> <rdf:RDF xmlns:bqbiol='http://biomodels.net/biology-qualifiers/' xmlns:bqmodel='http://biomodels.net/model-qualifiers/' xmlns:dc='http://purl.org/dc/elements/1.1/' xmlns:dcterms='http://purl.org/dc/terms/' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#' xmlns:vCard='http://www.w3.org/2001/vcard-rdf/3.0#'> <rdf:Description rdf:about='#metaid_27'> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource='http://identifiers.org/kegg.compound/C04442'/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </species> <species boundaryCondition='false' compartment='default' constant='false' hasOnlySubstanceUnits='false' id='MAL' initialConcentration='0.3595713' metaid='metaid_28' name='MAL' substanceUnits='substance'> <annotation> <COPASI xmlns='http://www.copasi.org/static/sbml'> <rdf:RDF xmlns:CopasiMT='http://www.copasi.org/RDF/MiriamTerms#' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#'> <rdf:Description rdf:about='#metaid_28'> <CopasiMT:is> <rdf:Bag> <rdf:li rdf:resource='http://identifiers.org/kegg.compound/C00149'/> </rdf:Bag> </CopasiMT:is> </rdf:Description> </rdf:RDF> </COPASI> <rdf:RDF xmlns:bqbiol='http://biomodels.net/biology-qualifiers/' xmlns:bqmodel='http://biomodels.net/model-qualifiers/' xmlns:dc='http://purl.org/dc/elements/1.1/' xmlns:dcterms='http://purl.org/dc/terms/' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#' xmlns:vCard='http://www.w3.org/2001/vcard-rdf/3.0#'> <rdf:Description rdf:about='#metaid_28'> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource='http://identifiers.org/kegg.compound/C00149'/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </species> <species boundaryCondition='false' compartment='default' constant='false' hasOnlySubstanceUnits='false' id='MDH' initialConcentration='0.01299488' metaid='metaid_29' name='MDH' substanceUnits='substance'> <annotation> <COPASI xmlns='http://www.copasi.org/static/sbml'> <rdf:RDF xmlns:CopasiMT='http://www.copasi.org/RDF/MiriamTerms#' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#'> <rdf:Description rdf:about='#metaid_29'> <CopasiMT:isEncodedBy> <rdf:Bag> <rdf:li rdf:resource='http://identifiers.org/kegg.genes/eco:b3236'/> </rdf:Bag> </CopasiMT:isEncodedBy> </rdf:Description> </rdf:RDF> </COPASI> <rdf:RDF xmlns:bqbiol='http://biomodels.net/biology-qualifiers/' xmlns:bqmodel='http://biomodels.net/model-qualifiers/' xmlns:dc='http://purl.org/dc/elements/1.1/' xmlns:dcterms='http://purl.org/dc/terms/' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#' xmlns:vCard='http://www.w3.org/2001/vcard-rdf/3.0#'> <rdf:Description rdf:about='#metaid_29'> <bqbiol:isEncodedBy> <rdf:Bag> <rdf:li rdf:resource='http://identifiers.org/kegg.genes/eco:b3236'/> </rdf:Bag> </bqbiol:isEncodedBy> </rdf:Description> </rdf:RDF> </annotation> </species> <species boundaryCondition='false' compartment='default' constant='false' hasOnlySubstanceUnits='false' id='MS' initialConcentration='0.01705105' metaid='metaid_30' name='MS' substanceUnits='substance'> <annotation> <COPASI xmlns='http://www.copasi.org/static/sbml'> <rdf:RDF xmlns:CopasiMT='http://www.copasi.org/RDF/MiriamTerms#' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#'> <rdf:Description rdf:about='#metaid_30'> <CopasiMT:isEncodedBy> <rdf:Bag> <rdf:li rdf:resource='http://identifiers.org/kegg.genes/eco:b4014'/> </rdf:Bag> </CopasiMT:isEncodedBy> </rdf:Description> </rdf:RDF> </COPASI> <rdf:RDF xmlns:bqbiol='http://biomodels.net/biology-qualifiers/' xmlns:bqmodel='http://biomodels.net/model-qualifiers/' xmlns:dc='http://purl.org/dc/elements/1.1/' xmlns:dcterms='http://purl.org/dc/terms/' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#' xmlns:vCard='http://www.w3.org/2001/vcard-rdf/3.0#'> <rdf:Description rdf:about='#metaid_30'> <bqbiol:isEncodedBy> <rdf:Bag> <rdf:li rdf:resource='http://identifiers.org/kegg.genes/eco:b4014'/> </rdf:Bag> </bqbiol:isEncodedBy> </rdf:Description> </rdf:RDF> </annotation> </species> <species boundaryCondition='false' compartment='default' constant='false' hasOnlySubstanceUnits='false' id='Mez' initialConcentration='0.005002867' metaid='metaid_31' name='Mez' substanceUnits='substance'> <annotation> <COPASI xmlns='http://www.copasi.org/static/sbml'> <rdf:RDF xmlns:CopasiMT='http://www.copasi.org/RDF/MiriamTerms#' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#'> <rdf:Description rdf:about='#metaid_31'> <CopasiMT:isEncodedBy> <rdf:Bag> <rdf:li rdf:resource='http://identifiers.org/kegg.genes/eco:b2463'/> </rdf:Bag> </CopasiMT:isEncodedBy> </rdf:Description> </rdf:RDF> </COPASI> <rdf:RDF xmlns:bqbiol='http://biomodels.net/biology-qualifiers/' xmlns:bqmodel='http://biomodels.net/model-qualifiers/' xmlns:dc='http://purl.org/dc/elements/1.1/' xmlns:dcterms='http://purl.org/dc/terms/' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#' xmlns:vCard='http://www.w3.org/2001/vcard-rdf/3.0#'> <rdf:Description rdf:about='#metaid_31'> <bqbiol:isEncodedBy> <rdf:Bag> <rdf:li rdf:resource='http://identifiers.org/kegg.genes/eco:b2463'/> </rdf:Bag> </bqbiol:isEncodedBy> </rdf:Description> </rdf:RDF> </annotation> </species> <species boundaryCondition='false' compartment='default' constant='false' hasOnlySubstanceUnits='false' id='OAA' initialConcentration='0.00417632' metaid='metaid_32' name='OAA' substanceUnits='substance'> <annotation> <COPASI xmlns='http://www.copasi.org/static/sbml'> <rdf:RDF xmlns:CopasiMT='http://www.copasi.org/RDF/MiriamTerms#' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#'> <rdf:Description rdf:about='#metaid_32'> <CopasiMT:is> <rdf:Bag> <rdf:li rdf:resource='http://identifiers.org/kegg.compound/C00036'/> </rdf:Bag> </CopasiMT:is> </rdf:Description> </rdf:RDF> </COPASI> <rdf:RDF xmlns:bqbiol='http://biomodels.net/biology-qualifiers/' xmlns:bqmodel='http://biomodels.net/model-qualifiers/' xmlns:dc='http://purl.org/dc/elements/1.1/' xmlns:dcterms='http://purl.org/dc/terms/' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#' xmlns:vCard='http://www.w3.org/2001/vcard-rdf/3.0#'> <rdf:Description rdf:about='#metaid_32'> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource='http://identifiers.org/kegg.compound/C00036'/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </species> <species boundaryCondition='false' compartment='default' constant='false' hasOnlySubstanceUnits='false' id='PDH' initialConcentration='0.003964048' metaid='metaid_33' name='PDH' substanceUnits='substance'> <annotation> <COPASI xmlns='http://www.copasi.org/static/sbml'> <rdf:RDF xmlns:CopasiMT='http://www.copasi.org/RDF/MiriamTerms#' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#'> <rdf:Description rdf:about='#metaid_33'> <CopasiMT:isEncodedBy> <rdf:Bag> <rdf:li rdf:resource='http://identifiers.org/kegg.genes/eco:b0115'/> </rdf:Bag> </CopasiMT:isEncodedBy> <CopasiMT:isEncodedBy> <rdf:Bag> <rdf:li rdf:resource='http://identifiers.org/kegg.genes/eco:b0116'/> </rdf:Bag> </CopasiMT:isEncodedBy> <CopasiMT:isEncodedBy> <rdf:Bag> <rdf:li rdf:resource='http://identifiers.org/kegg.genes/eco:b0114'/> </rdf:Bag> </CopasiMT:isEncodedBy> </rdf:Description> </rdf:RDF> </COPASI> <rdf:RDF xmlns:bqbiol='http://biomodels.net/biology-qualifiers/' xmlns:bqmodel='http://biomodels.net/model-qualifiers/' xmlns:dc='http://purl.org/dc/elements/1.1/' xmlns:dcterms='http://purl.org/dc/terms/' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#' xmlns:vCard='http://www.w3.org/2001/vcard-rdf/3.0#'> <rdf:Description rdf:about='#metaid_33'> <bqbiol:isEncodedBy> <rdf:Bag> <rdf:li rdf:resource='http://identifiers.org/kegg.genes/eco:b0114'/> </rdf:Bag> </bqbiol:isEncodedBy> <bqbiol:isEncodedBy> <rdf:Bag> <rdf:li rdf:resource='http://identifiers.org/kegg.genes/eco:b0115'/> </rdf:Bag> </bqbiol:isEncodedBy> <bqbiol:isEncodedBy> <rdf:Bag> <rdf:li rdf:resource='http://identifiers.org/kegg.genes/eco:b0116'/> </rdf:Bag> </bqbiol:isEncodedBy> </rdf:Description> </rdf:RDF> </annotation> </species> <species boundaryCondition='false' compartment='default' constant='false' hasOnlySubstanceUnits='false' id='PEP' initialConcentration='1.144942' metaid='metaid_34' name='PEP' substanceUnits='substance'> <annotation> <COPASI xmlns='http://www.copasi.org/static/sbml'> <rdf:RDF xmlns:CopasiMT='http://www.copasi.org/RDF/MiriamTerms#' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#'> <rdf:Description rdf:about='#metaid_34'> <CopasiMT:is> <rdf:Bag> <rdf:li rdf:resource='http://identifiers.org/kegg.compound/C00074'/> </rdf:Bag> </CopasiMT:is> </rdf:Description> </rdf:RDF> </COPASI> <rdf:RDF xmlns:bqbiol='http://biomodels.net/biology-qualifiers/' xmlns:bqmodel='http://biomodels.net/model-qualifiers/' xmlns:dc='http://purl.org/dc/elements/1.1/' xmlns:dcterms='http://purl.org/dc/terms/' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#' xmlns:vCard='http://www.w3.org/2001/vcard-rdf/3.0#'> <rdf:Description rdf:about='#metaid_34'> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource='http://identifiers.org/kegg.compound/C00074'/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </species> <species boundaryCondition='false' compartment='default' constant='false' hasOnlySubstanceUnits='false' id='PYR' initialConcentration='0.1623071' metaid='metaid_35' name='PYR' substanceUnits='substance'> <annotation> <COPASI xmlns='http://www.copasi.org/static/sbml'> <rdf:RDF xmlns:CopasiMT='http://www.copasi.org/RDF/MiriamTerms#' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#'> <rdf:Description rdf:about='#metaid_35'> <CopasiMT:is> <rdf:Bag> <rdf:li rdf:resource='http://identifiers.org/kegg.compound/C00022'/> </rdf:Bag> </CopasiMT:is> </rdf:Description> </rdf:RDF> </COPASI> <rdf:RDF xmlns:bqbiol='http://biomodels.net/biology-qualifiers/' xmlns:bqmodel='http://biomodels.net/model-qualifiers/' xmlns:dc='http://purl.org/dc/elements/1.1/' xmlns:dcterms='http://purl.org/dc/terms/' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#' xmlns:vCard='http://www.w3.org/2001/vcard-rdf/3.0#'> <rdf:Description rdf:about='#metaid_35'> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource='http://identifiers.org/kegg.compound/C00022'/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </species> <species boundaryCondition='false' compartment='default' constant='false' hasOnlySubstanceUnits='false' id='Pck' initialConcentration='0.02602389' metaid='metaid_36' name='Pck' substanceUnits='substance'> <annotation> <COPASI xmlns='http://www.copasi.org/static/sbml'> <rdf:RDF xmlns:CopasiMT='http://www.copasi.org/RDF/MiriamTerms#' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#'> <rdf:Description rdf:about='#metaid_36'> <CopasiMT:isEncodedBy> <rdf:Bag> <rdf:li rdf:resource='http://identifiers.org/kegg.genes/eco:b3403'/> </rdf:Bag> </CopasiMT:isEncodedBy> </rdf:Description> </rdf:RDF> </COPASI> <rdf:RDF xmlns:bqbiol='http://biomodels.net/biology-qualifiers/' xmlns:bqmodel='http://biomodels.net/model-qualifiers/' xmlns:dc='http://purl.org/dc/elements/1.1/' xmlns:dcterms='http://purl.org/dc/terms/' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#' xmlns:vCard='http://www.w3.org/2001/vcard-rdf/3.0#'> <rdf:Description rdf:about='#metaid_36'> <bqbiol:isEncodedBy> <rdf:Bag> <rdf:li rdf:resource='http://identifiers.org/kegg.genes/eco:b3403'/> </rdf:Bag> </bqbiol:isEncodedBy> </rdf:Description> </rdf:RDF> </annotation> </species> <species boundaryCondition='false' compartment='default' constant='false' hasOnlySubstanceUnits='false' id='Pfk' initialConcentration='0.006960664' metaid='metaid_37' name='Pfk' substanceUnits='substance'> <annotation> <COPASI xmlns='http://www.copasi.org/static/sbml'> <rdf:RDF xmlns:CopasiMT='http://www.copasi.org/RDF/MiriamTerms#' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#'> <rdf:Description rdf:about='#metaid_37'> <CopasiMT:isEncodedBy> <rdf:Bag> <rdf:li rdf:resource='http://identifiers.org/kegg.genes/eco:b3916'/> </rdf:Bag> </CopasiMT:isEncodedBy> </rdf:Description> </rdf:RDF> </COPASI> <rdf:RDF xmlns:bqbiol='http://biomodels.net/biology-qualifiers/' xmlns:bqmodel='http://biomodels.net/model-qualifiers/' xmlns:dc='http://purl.org/dc/elements/1.1/' xmlns:dcterms='http://purl.org/dc/terms/' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#' xmlns:vCard='http://www.w3.org/2001/vcard-rdf/3.0#'> <rdf:Description rdf:about='#metaid_37'> <bqbiol:isEncodedBy> <rdf:Bag> <rdf:li rdf:resource='http://identifiers.org/kegg.genes/eco:b3916'/> </rdf:Bag> </bqbiol:isEncodedBy> </rdf:Description> </rdf:RDF> </annotation> </species> <species boundaryCondition='false' compartment='default' constant='false' hasOnlySubstanceUnits='false' id='Ppc' initialConcentration='0.004930135' metaid='metaid_38' name='Ppc' substanceUnits='substance'> <annotation> <COPASI xmlns='http://www.copasi.org/static/sbml'> <rdf:RDF xmlns:CopasiMT='http://www.copasi.org/RDF/MiriamTerms#' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#'> <rdf:Description rdf:about='#metaid_38'> <CopasiMT:isEncodedBy> <rdf:Bag> <rdf:li rdf:resource='http://identifiers.org/kegg.genes/eco:b3956'/> </rdf:Bag> </CopasiMT:isEncodedBy> </rdf:Description> </rdf:RDF> </COPASI> <rdf:RDF xmlns:bqbiol='http://biomodels.net/biology-qualifiers/' xmlns:bqmodel='http://biomodels.net/model-qualifiers/' xmlns:dc='http://purl.org/dc/elements/1.1/' xmlns:dcterms='http://purl.org/dc/terms/' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#' xmlns:vCard='http://www.w3.org/2001/vcard-rdf/3.0#'> <rdf:Description rdf:about='#metaid_38'> <bqbiol:isEncodedBy> <rdf:Bag> <rdf:li rdf:resource='http://identifiers.org/kegg.genes/eco:b3956'/> </rdf:Bag> </bqbiol:isEncodedBy> </rdf:Description> </rdf:RDF> </annotation> </species> <species boundaryCondition='false' compartment='default' constant='false' hasOnlySubstanceUnits='false' id='Pps' initialConcentration='0.04296997' metaid='metaid_39' name='Pps' substanceUnits='substance'> <annotation> <COPASI xmlns='http://www.copasi.org/static/sbml'> <rdf:RDF xmlns:CopasiMT='http://www.copasi.org/RDF/MiriamTerms#' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#'> <rdf:Description rdf:about='#metaid_39'> <CopasiMT:isEncodedBy> <rdf:Bag> <rdf:li rdf:resource='http://identifiers.org/kegg.genes/eco:b1702'/> </rdf:Bag> </CopasiMT:isEncodedBy> </rdf:Description> </rdf:RDF> </COPASI> <rdf:RDF xmlns:bqbiol='http://biomodels.net/biology-qualifiers/' xmlns:bqmodel='http://biomodels.net/model-qualifiers/' xmlns:dc='http://purl.org/dc/elements/1.1/' xmlns:dcterms='http://purl.org/dc/terms/' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#' xmlns:vCard='http://www.w3.org/2001/vcard-rdf/3.0#'> <rdf:Description rdf:about='#metaid_39'> <bqbiol:isEncodedBy> <rdf:Bag> <rdf:li rdf:resource='http://identifiers.org/kegg.genes/eco:b1702'/> </rdf:Bag> </bqbiol:isEncodedBy> </rdf:Description> </rdf:RDF> </annotation> </species> <species boundaryCondition='false' compartment='default' constant='false' hasOnlySubstanceUnits='false' id='Pyk' initialConcentration='0.02344254' metaid='metaid_40' name='Pyk' substanceUnits='substance'> <annotation> <COPASI xmlns='http://www.copasi.org/static/sbml'> <rdf:RDF xmlns:CopasiMT='http://www.copasi.org/RDF/MiriamTerms#' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#'> <rdf:Description rdf:about='#metaid_40'> <CopasiMT:isEncodedBy> <rdf:Bag> <rdf:li rdf:resource='http://identifiers.org/kegg.genes/eco:b1676'/> </rdf:Bag> </CopasiMT:isEncodedBy> </rdf:Description> </rdf:RDF> </COPASI> <rdf:RDF xmlns:bqbiol='http://biomodels.net/biology-qualifiers/' xmlns:bqmodel='http://biomodels.net/model-qualifiers/' xmlns:dc='http://purl.org/dc/elements/1.1/' xmlns:dcterms='http://purl.org/dc/terms/' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#' xmlns:vCard='http://www.w3.org/2001/vcard-rdf/3.0#'> <rdf:Description rdf:about='#metaid_40'> <bqbiol:isEncodedBy> <rdf:Bag> <rdf:li rdf:resource='http://identifiers.org/kegg.genes/eco:b1676'/> </rdf:Bag> </bqbiol:isEncodedBy> </rdf:Description> </rdf:RDF> </annotation> </species> <species boundaryCondition='false' compartment='default' constant='false' hasOnlySubstanceUnits='false' id='R5P' initialConcentration='0.1493906' metaid='metaid_41' name='R5P' substanceUnits='substance'> <annotation> <COPASI xmlns='http://www.copasi.org/static/sbml'> <rdf:RDF xmlns:CopasiMT='http://www.copasi.org/RDF/MiriamTerms#' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#'> <rdf:Description rdf:about='#metaid_41'> <CopasiMT:is> <rdf:Bag> <rdf:li rdf:resource='http://identifiers.org/kegg.compound/C00117'/> </rdf:Bag> </CopasiMT:is> </rdf:Description> </rdf:RDF> </COPASI> <rdf:RDF xmlns:bqbiol='http://biomodels.net/biology-qualifiers/' xmlns:bqmodel='http://biomodels.net/model-qualifiers/' xmlns:dc='http://purl.org/dc/elements/1.1/' xmlns:dcterms='http://purl.org/dc/terms/' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#' xmlns:vCard='http://www.w3.org/2001/vcard-rdf/3.0#'> <rdf:Description rdf:about='#metaid_41'> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource='http://identifiers.org/kegg.compound/C00117'/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </species> <species boundaryCondition='false' compartment='default' constant='false' hasOnlySubstanceUnits='false' id='RU5P' initialConcentration='0.3263905' metaid='metaid_42' name='RU5P' substanceUnits='substance'> <annotation> <COPASI xmlns='http://www.copasi.org/static/sbml'> <rdf:RDF xmlns:CopasiMT='http://www.copasi.org/RDF/MiriamTerms#' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#'> <rdf:Description rdf:about='#metaid_42'> <CopasiMT:is> <rdf:Bag> <rdf:li rdf:resource='http://identifiers.org/kegg.compound/C00199'/> </rdf:Bag> </CopasiMT:is> </rdf:Description> </rdf:RDF> </COPASI> <rdf:RDF xmlns:bqbiol='http://biomodels.net/biology-qualifiers/' xmlns:bqmodel='http://biomodels.net/model-qualifiers/' xmlns:dc='http://purl.org/dc/elements/1.1/' xmlns:dcterms='http://purl.org/dc/terms/' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#' xmlns:vCard='http://www.w3.org/2001/vcard-rdf/3.0#'> <rdf:Description rdf:about='#metaid_42'> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource='http://identifiers.org/kegg.compound/C00199'/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </species> <species boundaryCondition='false' compartment='default' constant='false' hasOnlySubstanceUnits='false' id='S7P' initialConcentration='0.1267481' metaid='metaid_43' name='S7P' substanceUnits='substance'> <annotation> <COPASI xmlns='http://www.copasi.org/static/sbml'> <rdf:RDF xmlns:CopasiMT='http://www.copasi.org/RDF/MiriamTerms#' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#'> <rdf:Description rdf:about='#metaid_43'> <CopasiMT:is> <rdf:Bag> <rdf:li rdf:resource='http://identifiers.org/kegg.compound/C05382'/> </rdf:Bag> </CopasiMT:is> </rdf:Description> </rdf:RDF> </COPASI> <rdf:RDF xmlns:bqbiol='http://biomodels.net/biology-qualifiers/' xmlns:bqmodel='http://biomodels.net/model-qualifiers/' xmlns:dc='http://purl.org/dc/elements/1.1/' xmlns:dcterms='http://purl.org/dc/terms/' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#' xmlns:vCard='http://www.w3.org/2001/vcard-rdf/3.0#'> <rdf:Description rdf:about='#metaid_43'> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource='http://identifiers.org/kegg.compound/C05382'/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </species> <species boundaryCondition='false' compartment='default' constant='false' hasOnlySubstanceUnits='false' id='SDH' initialConcentration='0.1423045' metaid='metaid_44' name='SDH' substanceUnits='substance'> <annotation> <COPASI xmlns='http://www.copasi.org/static/sbml'> <rdf:RDF xmlns:CopasiMT='http://www.copasi.org/RDF/MiriamTerms#' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#'> <rdf:Description rdf:about='#metaid_44'> <CopasiMT:isEncodedBy> <rdf:Bag> <rdf:li rdf:resource='http://identifiers.org/kegg.genes/eco:b0724'/> </rdf:Bag> </CopasiMT:isEncodedBy> <CopasiMT:isEncodedBy> <rdf:Bag> <rdf:li rdf:resource='http://identifiers.org/kegg.genes/eco:b0723'/> </rdf:Bag> </CopasiMT:isEncodedBy> </rdf:Description> </rdf:RDF> </COPASI> <rdf:RDF xmlns:bqbiol='http://biomodels.net/biology-qualifiers/' xmlns:bqmodel='http://biomodels.net/model-qualifiers/' xmlns:dc='http://purl.org/dc/elements/1.1/' xmlns:dcterms='http://purl.org/dc/terms/' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#' xmlns:vCard='http://www.w3.org/2001/vcard-rdf/3.0#'> <rdf:Description rdf:about='#metaid_44'> <bqbiol:isEncodedBy> <rdf:Bag> <rdf:li rdf:resource='http://identifiers.org/kegg.genes/eco:b0724'/> </rdf:Bag> </bqbiol:isEncodedBy> <bqbiol:isEncodedBy> <rdf:Bag> <rdf:li rdf:resource='http://identifiers.org/kegg.genes/eco:b0723'/> </rdf:Bag> </bqbiol:isEncodedBy> </rdf:Description> </rdf:RDF> </annotation> </species> <species boundaryCondition='false' compartment='default' constant='false' hasOnlySubstanceUnits='false' id='SUC' initialConcentration='0.08989537' metaid='metaid_45' name='SUC' substanceUnits='substance'> <annotation> <COPASI xmlns='http://www.copasi.org/static/sbml'> <rdf:RDF xmlns:CopasiMT='http://www.copasi.org/RDF/MiriamTerms#' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#'> <rdf:Description rdf:about='#metaid_45'> <CopasiMT:is> <rdf:Bag> <rdf:li rdf:resource='http://identifiers.org/kegg.compound/C00042'/> </rdf:Bag> </CopasiMT:is> </rdf:Description> </rdf:RDF> </COPASI> <rdf:RDF xmlns:bqbiol='http://biomodels.net/biology-qualifiers/' xmlns:bqmodel='http://biomodels.net/model-qualifiers/' xmlns:dc='http://purl.org/dc/elements/1.1/' xmlns:dcterms='http://purl.org/dc/terms/' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#' xmlns:vCard='http://www.w3.org/2001/vcard-rdf/3.0#'> <rdf:Description rdf:about='#metaid_45'> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource='http://identifiers.org/kegg.compound/C00042'/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </species> <species boundaryCondition='false' compartment='default' constant='false' hasOnlySubstanceUnits='false' id='X' initialConcentration='0.011' metaid='metaid_46' name='X' substanceUnits='substance'> <annotation> <COPASI xmlns='http://www.copasi.org/static/sbml'> <rdf:RDF xmlns:dcterms='http://purl.org/dc/terms/' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#'> <rdf:Description rdf:about='#metaid_46'> <dcterms:created> <rdf:Description> <dcterms:W3CDTF>2015-12-30T19:33:10Z</dcterms:W3CDTF> </rdf:Description> </dcterms:created> </rdf:Description> </rdf:RDF> </COPASI> </annotation> </species> <species boundaryCondition='false' compartment='default' constant='false' hasOnlySubstanceUnits='false' id='X5P' initialConcentration='0.3775991' metaid='metaid_47' name='X5P' substanceUnits='substance'> <annotation> <COPASI xmlns='http://www.copasi.org/static/sbml'> <rdf:RDF xmlns:CopasiMT='http://www.copasi.org/RDF/MiriamTerms#' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#'> <rdf:Description rdf:about='#metaid_47'> <CopasiMT:is> <rdf:Bag> <rdf:li rdf:resource='http://identifiers.org/kegg.compound/C00231'/> </rdf:Bag> </CopasiMT:is> </rdf:Description> </rdf:RDF> </COPASI> <rdf:RDF xmlns:bqbiol='http://biomodels.net/biology-qualifiers/' xmlns:bqmodel='http://biomodels.net/model-qualifiers/' xmlns:dc='http://purl.org/dc/elements/1.1/' xmlns:dcterms='http://purl.org/dc/terms/' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#' xmlns:vCard='http://www.w3.org/2001/vcard-rdf/3.0#'> <rdf:Description rdf:about='#metaid_47'> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource='http://identifiers.org/kegg.compound/C00231'/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </species> <species boundaryCondition='false' compartment='default' constant='false' hasOnlySubstanceUnits='false' id='aKG' initialConcentration='6.520588e-005' metaid='metaid_48' name='aKG' substanceUnits='substance'> <annotation> <COPASI xmlns='http://www.copasi.org/static/sbml'> <rdf:RDF xmlns:CopasiMT='http://www.copasi.org/RDF/MiriamTerms#' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#'> <rdf:Description rdf:about='#metaid_48'> <CopasiMT:is> <rdf:Bag> <rdf:li rdf:resource='http://identifiers.org/kegg.compound/C00026'/> </rdf:Bag> </CopasiMT:is> </rdf:Description> </rdf:RDF> </COPASI> <rdf:RDF xmlns:bqbiol='http://biomodels.net/biology-qualifiers/' xmlns:bqmodel='http://biomodels.net/model-qualifiers/' xmlns:dc='http://purl.org/dc/elements/1.1/' xmlns:dcterms='http://purl.org/dc/terms/' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#' xmlns:vCard='http://www.w3.org/2001/vcard-rdf/3.0#'> <rdf:Description rdf:about='#metaid_48'> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource='http://identifiers.org/kegg.compound/C00026'/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </species> <species boundaryCondition='false' compartment='default' constant='false' hasOnlySubstanceUnits='false' id='aKGDH' initialConcentration='0.0058047' metaid='metaid_49' name='aKGDH' substanceUnits='substance'> <annotation> <COPASI xmlns='http://www.copasi.org/static/sbml'> <rdf:RDF xmlns:CopasiMT='http://www.copasi.org/RDF/MiriamTerms#' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#'> <rdf:Description rdf:about='#metaid_49'> <CopasiMT:isEncodedBy> <rdf:Bag> <rdf:li rdf:resource='http://identifiers.org/kegg.genes/eco:b0726'/> </rdf:Bag> </CopasiMT:isEncodedBy> <CopasiMT:isEncodedBy> <rdf:Bag> <rdf:li rdf:resource='http://identifiers.org/kegg.genes/eco:b0727'/> </rdf:Bag> </CopasiMT:isEncodedBy> </rdf:Description> </rdf:RDF> </COPASI> <rdf:RDF xmlns:bqbiol='http://biomodels.net/biology-qualifiers/' xmlns:bqmodel='http://biomodels.net/model-qualifiers/' xmlns:dc='http://purl.org/dc/elements/1.1/' xmlns:dcterms='http://purl.org/dc/terms/' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#' xmlns:vCard='http://www.w3.org/2001/vcard-rdf/3.0#'> <rdf:Description rdf:about='#metaid_49'> <bqbiol:isEncodedBy> <rdf:Bag> <rdf:li rdf:resource='http://identifiers.org/kegg.genes/eco:b0726'/> </rdf:Bag> </bqbiol:isEncodedBy> <bqbiol:isEncodedBy> <rdf:Bag> <rdf:li rdf:resource='http://identifiers.org/kegg.genes/eco:b0727'/> </rdf:Bag> </bqbiol:isEncodedBy> </rdf:Description> </rdf:RDF> </annotation> </species> <species boundaryCondition='false' compartment='default' constant='false' hasOnlySubstanceUnits='false' id='cAMP' initialConcentration='0.4297333' metaid='metaid_50' name='cAMP' substanceUnits='substance'> <annotation> <COPASI xmlns='http://www.copasi.org/static/sbml'> <rdf:RDF xmlns:CopasiMT='http://www.copasi.org/RDF/MiriamTerms#' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#'> <rdf:Description rdf:about='#metaid_50'> <CopasiMT:is> <rdf:Bag> <rdf:li rdf:resource='http://identifiers.org/kegg.compound/C00575'/> </rdf:Bag> </CopasiMT:is> </rdf:Description> </rdf:RDF> </COPASI> <rdf:RDF xmlns:bqbiol='http://biomodels.net/biology-qualifiers/' xmlns:bqmodel='http://biomodels.net/model-qualifiers/' xmlns:dc='http://purl.org/dc/elements/1.1/' xmlns:dcterms='http://purl.org/dc/terms/' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#' xmlns:vCard='http://www.w3.org/2001/vcard-rdf/3.0#'> <rdf:Description rdf:about='#metaid_50'> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource='http://identifiers.org/kegg.compound/C00575'/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </species> <species boundaryCondition='false' compartment='default' constant='false' hasOnlySubstanceUnits='false' id='sixPG' initialConcentration='0.3134328' metaid='metaid_51' name='sixPG' substanceUnits='substance'> <annotation> <COPASI xmlns='http://www.copasi.org/static/sbml'> <rdf:RDF xmlns:CopasiMT='http://www.copasi.org/RDF/MiriamTerms#' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#'> <rdf:Description rdf:about='#metaid_51'> <CopasiMT:is> <rdf:Bag> <rdf:li rdf:resource='http://identifiers.org/kegg.compound/C00345'/> </rdf:Bag> </CopasiMT:is> </rdf:Description> </rdf:RDF> </COPASI> <rdf:RDF xmlns:bqbiol='http://biomodels.net/biology-qualifiers/' xmlns:bqmodel='http://biomodels.net/model-qualifiers/' xmlns:dc='http://purl.org/dc/elements/1.1/' xmlns:dcterms='http://purl.org/dc/terms/' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#' xmlns:vCard='http://www.w3.org/2001/vcard-rdf/3.0#'> <rdf:Description rdf:about='#metaid_51'> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource='http://identifiers.org/kegg.compound/C00345'/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </species> <species boundaryCondition='false' compartment='default' constant='false' hasOnlySubstanceUnits='false' id='sixPGL' initialConcentration='0.01042497' metaid='metaid_52' name='sixPGL' substanceUnits='substance'> <annotation> <COPASI xmlns='http://www.copasi.org/static/sbml'> <rdf:RDF xmlns:CopasiMT='http://www.copasi.org/RDF/MiriamTerms#' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#'> <rdf:Description rdf:about='#metaid_52'> <CopasiMT:is> <rdf:Bag> <rdf:li rdf:resource='http://identifiers.org/kegg.compound/C01236'/> </rdf:Bag> </CopasiMT:is> </rdf:Description> </rdf:RDF> </COPASI> <rdf:RDF xmlns:bqbiol='http://biomodels.net/biology-qualifiers/' xmlns:bqmodel='http://biomodels.net/model-qualifiers/' xmlns:dc='http://purl.org/dc/elements/1.1/' xmlns:dcterms='http://purl.org/dc/terms/' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#' xmlns:vCard='http://www.w3.org/2001/vcard-rdf/3.0#'> <rdf:Description rdf:about='#metaid_52'> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource='http://identifiers.org/kegg.compound/C01236'/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </species> </listOfSpecies> <listOfParameters> <parameter constant='false' id='A' metaid='metaid_53' name='A' value='14.8439965464001'/> <parameter constant='true' id='ADP' metaid='metaid_54' name='ADP' value='0.56'/> <parameter constant='true' id='AMP' metaid='metaid_55' name='AMP' value='0.28'/> <parameter constant='true' id='ATP' metaid='metaid_56' name='ATP' value='9.6'/> <parameter constant='false' id='B' metaid='metaid_57' name='B' value='1.02987904944711'/> <parameter constant='true' id='CoA' metaid='metaid_58' name='CoA' value='1.4'/> <parameter constant='false' id='Cra' metaid='metaid_59' name='Cra' value='9.75242922334915e-005'/> <parameter constant='false' id='CraFBP' metaid='metaid_60' name='CraFBP' value='0.000202475707766508'/> <parameter constant='true' id='Cratotal' metaid='metaid_61' name='Cratotal' value='0.0003'/> <parameter constant='false' id='Crp' metaid='metaid_62' name='Crp' value='0.00568742121831752'/> <parameter constant='false' id='CrpcAMP' metaid='metaid_63' name='CrpcAMP' value='0.00581257878168248'/> <parameter constant='true' id='Crptotal' metaid='metaid_64' name='Crptotal' value='0.0115'/> <parameter constant='true' id='D' metaid='metaid_65' name='D' value='0'/> <parameter constant='false' id='EIIA' metaid='metaid_66' name='EIIA' value='0.05693852'/> <parameter constant='true' id='EIIAtotal' metaid='metaid_67' name='EIIAtotal' value='0.0769'/> <parameter constant='true' id='EXTERNAL' metaid='metaid_68' name='EXTERNAL' value='0'/> <parameter constant='true' id='Factor_aceB' metaid='metaid_69' name='Factor_aceB' value='0.3090586'/> <parameter constant='true' id='Factor_aceK' metaid='metaid_70' name='Factor_aceK' value='0.01719646'/> <parameter constant='false' id='H' metaid='metaid_71' name='H' value='3.16227766016838e-005'/> <parameter constant='true' id='IclRtotal' metaid='metaid_72' name='IclRtotal' value='8.3e-005'/> <parameter constant='true' id='K6PGDH_6PG' metaid='metaid_73' name='K6PGDH_6PG' value='0.1008701'/> <parameter constant='true' id='K6PGDH_ATP_inh' metaid='metaid_74' name='K6PGDH_ATP_inh' value='3.005272'/> <parameter constant='true' id='K6PGDH_NADP' metaid='metaid_75' name='K6PGDH_NADP' value='0.02077525'/> <parameter constant='true' id='K6PGDH_NADPH_inh' metaid='metaid_76' name='K6PGDH_NADPH_inh' value='0.04210513'/> <parameter constant='true' id='KAceK_3PG' metaid='metaid_77' name='KAceK_3PG' value='0.4230557'/> <parameter constant='true' id='KAceK_GOX' metaid='metaid_78' name='KAceK_GOX' value='0.502583'/> <parameter constant='true' id='KAceK_ICDH' metaid='metaid_79' name='KAceK_ICDH' value='0.1968471'/> <parameter constant='true' id='KAceK_ICDHP' metaid='metaid_80' name='KAceK_ICDHP' value='7.259979'/> <parameter constant='true' id='KAceK_ICIT' metaid='metaid_81' name='KAceK_ICIT' value='0.08696074'/> <parameter constant='true' id='KAceK_OAA' metaid='metaid_82' name='KAceK_OAA' value='0.07226836'/> <parameter constant='true' id='KAceK_PEP' metaid='metaid_83' name='KAceK_PEP' value='0.3613786'/> <parameter constant='true' id='KAceK_PYR' metaid='metaid_84' name='KAceK_PYR' value='0.03447925'/> <parameter constant='true' id='KAceK_aKG' metaid='metaid_85' name='KAceK_aKG' value='0.4245231'/> <parameter constant='true' id='KAck_ACE_m' metaid='metaid_86' name='KAck_ACE_m' value='6.098441'/> <parameter constant='true' id='KAck_ADP_m' metaid='metaid_87' name='KAck_ADP_m' value='0.1765186'/> <parameter constant='true' id='KAck_ATP_m' metaid='metaid_88' name='KAck_ATP_m' value='0.08856692'/> <parameter constant='true' id='KAck_AcP_m' metaid='metaid_89' name='KAck_AcP_m' value='0.04633993'/> <parameter constant='true' id='KAck_eq' metaid='metaid_90' name='KAck_eq' value='233.9118'/> <parameter constant='true' id='KAcs_ACE' metaid='metaid_91' name='KAcs_ACE' value='0.02396574'/> <parameter constant='true' id='KCS_AcCoA' metaid='metaid_92' name='KCS_AcCoA' value='0.02983839'/> <parameter constant='true' id='KCS_OAA' metaid='metaid_93' name='KCS_OAA' value='0.01758593'/> <parameter constant='true' id='KCS_OAA_AcCoA' metaid='metaid_94' name='KCS_OAA_AcCoA' value='0.008855798'/> <parameter constant='true' id='KCS_aKG' metaid='metaid_95' name='KCS_aKG' value='0.1870362'/> <parameter constant='true' id='KCraFBP' metaid='metaid_96' name='KCraFBP' value='0.02936407'/> <parameter constant='true' id='KCrpcAMP' metaid='metaid_97' name='KCrpcAMP' value='0.4204802'/> <parameter constant='true' id='KCya_EIIAP' metaid='metaid_98' name='KCya_EIIAP' value='0.00207679'/> <parameter constant='true' id='KEda_GAP_m' metaid='metaid_99' name='KEda_GAP_m' value='1.177507'/> <parameter constant='true' id='KEda_KDPG_m' metaid='metaid_100' name='KEda_KDPG_m' value='0.1498322'/> <parameter constant='true' id='KEda_PYR_m' metaid='metaid_101' name='KEda_PYR_m' value='7.697218'/> <parameter constant='true' id='KEda_eq' metaid='metaid_102' name='KEda_eq' value='0.5024012'/> <parameter constant='true' id='KEdd_6PG_m' metaid='metaid_103' name='KEdd_6PG_m' value='0.1179869'/> <parameter constant='true' id='KEdd_KDPG_m' metaid='metaid_104' name='KEdd_KDPG_m' value='2.016048'/> <parameter constant='true' id='KEdd_eq' metaid='metaid_105' name='KEdd_eq' value='1004.176'/> <parameter constant='true' id='KFba_DHAP' metaid='metaid_106' name='KFba_DHAP' value='0.08803141'/> <parameter constant='true' id='KFba_FBP' metaid='metaid_107' name='KFba_FBP' value='0.08389795'/> <parameter constant='true' id='KFba_GAP' metaid='metaid_108' name='KFba_GAP' value='0.1535213'/> <parameter constant='true' id='KFba_GAP_inh' metaid='metaid_109' name='KFba_GAP_inh' value='0.599992'/> <parameter constant='true' id='KFba_eq' metaid='metaid_110' name='KFba_eq' value='0.3715746'/> <parameter constant='true' id='KFbp_FBP' metaid='metaid_111' name='KFbp_FBP' value='0.008921567'/> <parameter constant='true' id='KFbp_PEP' metaid='metaid_112' name='KFbp_PEP' value='0.4876568'/> <parameter constant='true' id='KFum_FUM_m' metaid='metaid_113' name='KFum_FUM_m' value='0.09649654'/> <parameter constant='true' id='KFum_eq' metaid='metaid_114' name='KFum_eq' value='12.86883'/> <parameter constant='true' id='KG6PDH_G6P' metaid='metaid_115' name='KG6PDH_G6P' value='0.07115758'/> <parameter constant='true' id='KG6PDH_NADP' metaid='metaid_116' name='KG6PDH_NADP' value='0.003824508'/> <parameter constant='true' id='KG6PDH_NADPH_g6pinh' metaid='metaid_117' name='KG6PDH_NADPH_g6pinh' value='0.1930955'/> <parameter constant='true' id='KG6PDH_NADPH_nadpinh' metaid='metaid_118' name='KG6PDH_NADPH_nadpinh' value='0.08153446'/> <parameter constant='true' id='KGAPDH_GAP' metaid='metaid_119' name='KGAPDH_GAP' value='0.1515578'/> <parameter constant='true' id='KGAPDH_NAD' metaid='metaid_120' name='KGAPDH_NAD' value='0.4496865'/> <parameter constant='true' id='KGAPDH_NADH' metaid='metaid_121' name='KGAPDH_NADH' value='0.02083409'/> <parameter constant='true' id='KGAPDH_PGP' metaid='metaid_122' name='KGAPDH_PGP' value='0.1342313'/> <parameter constant='true' id='KGAPDH_eq' metaid='metaid_123' name='KGAPDH_eq' value='0.3002488'/> <parameter constant='true' id='KGlk_ATP_m' metaid='metaid_124' name='KGlk_ATP_m' value='0.7115621'/> <parameter constant='true' id='KGlk_G6P_i' metaid='metaid_125' name='KGlk_G6P_i' value='14.98474'/> <parameter constant='true' id='KGlk_GLC_m' metaid='metaid_126' name='KGlk_GLC_m' value='0.1543541'/> <parameter constant='true' id='KICDH_ICIT' metaid='metaid_127' name='KICDH_ICIT' value='0.0002009678'/> <parameter constant='true' id='KICDH_PEP' metaid='metaid_128' name='KICDH_PEP' value='0.05482277'/> <parameter constant='true' id='KIcl_3PG' metaid='metaid_129' name='KIcl_3PG' value='0.5221927'/> <parameter constant='true' id='KIcl_ICIT' metaid='metaid_130' name='KIcl_ICIT' value='0.01506658'/> <parameter constant='true' id='KIcl_PEP' metaid='metaid_131' name='KIcl_PEP' value='0.01629063'/> <parameter constant='true' id='KIcl_aKG' metaid='metaid_132' name='KIcl_aKG' value='0.8343271'/> <parameter constant='true' id='KMDH_MAL_I' metaid='metaid_133' name='KMDH_MAL_I' value='3.459996'/> <parameter constant='true' id='KMDH_MAL_m' metaid='metaid_134' name='KMDH_MAL_m' value='1.773486'/> <parameter constant='true' id='KMDH_NADH_I' metaid='metaid_135' name='KMDH_NADH_I' value='0.02482509'/> <parameter constant='true' id='KMDH_NADH_m' metaid='metaid_136' name='KMDH_NADH_m' value='0.03134096'/> <parameter constant='true' id='KMDH_NAD_I' metaid='metaid_137' name='KMDH_NAD_I' value='0.1141382'/> <parameter constant='true' id='KMDH_NAD_II' metaid='metaid_138' name='KMDH_NAD_II' value='0.9453709'/> <parameter constant='true' id='KMDH_NAD_m' metaid='metaid_139' name='KMDH_NAD_m' value='0.0522041'/> <parameter constant='true' id='KMDH_OAA_I' metaid='metaid_140' name='KMDH_OAA_I' value='0.3443734'/> <parameter constant='true' id='KMDH_OAA_II' metaid='metaid_141' name='KMDH_OAA_II' value='0.07322962'/> <parameter constant='true' id='KMDH_OAA_m' metaid='metaid_142' name='KMDH_OAA_m' value='0.2083374'/> <parameter constant='true' id='KMDH_eq' metaid='metaid_143' name='KMDH_eq' value='0.7496505'/> <parameter constant='true' id='KMS_AcCoA' metaid='metaid_144' name='KMS_AcCoA' value='0.4622296'/> <parameter constant='true' id='KMS_GOX' metaid='metaid_145' name='KMS_GOX' value='1.106194'/> <parameter constant='true' id='KMS_GOX_AcCoA' metaid='metaid_146' name='KMS_GOX_AcCoA' value='0.3963891'/> <parameter constant='true' id='KMez_AcCoA' metaid='metaid_147' name='KMez_AcCoA' value='1.81606'/> <parameter constant='true' id='KMez_MAL' metaid='metaid_148' name='KMez_MAL' value='0.001461486'/> <parameter constant='true' id='KMez_cAMP' metaid='metaid_149' name='KMez_cAMP' value='4.548919'/> <parameter constant='true' id='KNonPTS_I' metaid='metaid_150' name='KNonPTS_I' value='0.01003482'/> <parameter constant='true' id='KNonPTS_S' metaid='metaid_151' name='KNonPTS_S' value='1.552527'/> <parameter constant='true' id='KPDH_AcCoA_m' metaid='metaid_152' name='KPDH_AcCoA_m' value='0.008003869'/> <parameter constant='true' id='KPDH_CoA_m' metaid='metaid_153' name='KPDH_CoA_m' value='0.004820189'/> <parameter constant='true' id='KPDH_NADH_m' metaid='metaid_154' name='KPDH_NADH_m' value='0.047137'/> <parameter constant='true' id='KPDH_NAD_m' metaid='metaid_155' name='KPDH_NAD_m' value='0.4007094'/> <parameter constant='true' id='KPDH_PYR_m' metaid='metaid_156' name='KPDH_PYR_m' value='1.004277'/> <parameter constant='true' id='KPDH_i' metaid='metaid_157' name='KPDH_i' value='68.34104'/> <parameter constant='true' id='KPTS_EIIA' metaid='metaid_158' name='KPTS_EIIA' value='0.002108572'/> <parameter constant='true' id='KPTS_GLC' metaid='metaid_159' name='KPTS_GLC' value='0.004896768'/> <parameter constant='true' id='KPck_ADP_i' metaid='metaid_160' name='KPck_ADP_i' value='0.01981523'/> <parameter constant='true' id='KPck_ATP_I' metaid='metaid_161' name='KPck_ATP_I' value='0.03984482'/> <parameter constant='true' id='KPck_ATP_i' metaid='metaid_162' name='KPck_ATP_i' value='0.0401462'/> <parameter constant='true' id='KPck_OAA' metaid='metaid_163' name='KPck_OAA' value='0.5784435'/> <parameter constant='true' id='KPck_OAA_I' metaid='metaid_164' name='KPck_OAA_I' value='0.3472346'/> <parameter constant='true' id='KPck_PEP' metaid='metaid_165' name='KPck_PEP' value='0.07010748'/> <parameter constant='true' id='KPck_PEP_i' metaid='metaid_166' name='KPck_PEP_i' value='0.06001231'/> <parameter constant='true' id='KPdhRPYR' metaid='metaid_167' name='KPdhRPYR' value='0.04337088'/> <parameter constant='true' id='KPfk_ADP_a' metaid='metaid_168' name='KPfk_ADP_a' value='276.9519'/> <parameter constant='true' id='KPfk_ADP_b' metaid='metaid_169' name='KPfk_ADP_b' value='0.2559477'/> <parameter constant='true' id='KPfk_ADP_c' metaid='metaid_170' name='KPfk_ADP_c' value='0.4479121'/> <parameter constant='true' id='KPfk_AMP_a' metaid='metaid_171' name='KPfk_AMP_a' value='10.05132'/> <parameter constant='true' id='KPfk_AMP_b' metaid='metaid_172' name='KPfk_AMP_b' value='0.02546271'/> <parameter constant='true' id='KPfk_ATP_s' metaid='metaid_173' name='KPfk_ATP_s' value='0.1605119'/> <parameter constant='true' id='KPfk_F6P_s' metaid='metaid_174' name='KPfk_F6P_s' value='0.02109821'/> <parameter constant='true' id='KPfk_PEP' metaid='metaid_175' name='KPfk_PEP' value='1.735874'/> <parameter constant='true' id='KPgi_F6P' metaid='metaid_176' name='KPgi_F6P' value='0.3415211'/> <parameter constant='true' id='KPgi_F6P_6pginh' metaid='metaid_177' name='KPgi_F6P_6pginh' value='0.1987742'/> <parameter constant='true' id='KPgi_G6P' metaid='metaid_178' name='KPgi_G6P' value='2.462244'/> <parameter constant='true' id='KPgi_G6P_6pginh' metaid='metaid_179' name='KPgi_G6P_6pginh' value='0.1807462'/> <parameter constant='true' id='KPgi_eq' metaid='metaid_180' name='KPgi_eq' value='1.438451'/> <parameter constant='true' id='KPgl_6PGL_m' metaid='metaid_181' name='KPgl_6PGL_m' value='0.02304828'/> <parameter constant='true' id='KPgl_6PG_m' metaid='metaid_182' name='KPgl_6PG_m' value='10.00894'/> <parameter constant='true' id='KPgl_eq' metaid='metaid_183' name='KPgl_eq' value='42.6949'/> <parameter constant='true' id='KPgl_h1' metaid='metaid_184' name='KPgl_h1' value='0.004374732'/> <parameter constant='true' id='KPgl_h2' metaid='metaid_185' name='KPgl_h2' value='9.704773e-006'/> <parameter constant='true' id='KPpc_FBP' metaid='metaid_186' name='KPpc_FBP' value='0.1890104'/> <parameter constant='true' id='KPpc_PEP' metaid='metaid_187' name='KPpc_PEP' value='0.02723253'/> <parameter constant='true' id='KPps_PEP' metaid='metaid_188' name='KPps_PEP' value='0.000216272'/> <parameter constant='true' id='KPps_PYR' metaid='metaid_189' name='KPps_PYR' value='0.0007126439'/> <parameter constant='true' id='KPta_AcCoA_i' metaid='metaid_190' name='KPta_AcCoA_i' value='0.2014246'/> <parameter constant='true' id='KPta_AcP_i' metaid='metaid_191' name='KPta_AcP_i' value='0.3201126'/> <parameter constant='true' id='KPta_AcP_m' metaid='metaid_192' name='KPta_AcP_m' value='0.2289388'/> <parameter constant='true' id='KPta_CoA_i' metaid='metaid_193' name='KPta_CoA_i' value='0.08096349'/> <parameter constant='true' id='KPta_Pi_i' metaid='metaid_194' name='KPta_Pi_i' value='2.106006'/> <parameter constant='true' id='KPta_Pi_m' metaid='metaid_195' name='KPta_Pi_m' value='0.6866589'/> <parameter constant='true' id='KPta_eq' metaid='metaid_196' name='KPta_eq' value='0.02839712'/> <parameter constant='true' id='KPyk_ADP' metaid='metaid_197' name='KPyk_ADP' value='0.2100309'/> <parameter constant='true' id='KPyk_AMP' metaid='metaid_198' name='KPyk_AMP' value='0.2553482'/> <parameter constant='true' id='KPyk_ATP' metaid='metaid_199' name='KPyk_ATP' value='20.17259'/> <parameter constant='true' id='KPyk_FBP' metaid='metaid_200' name='KPyk_FBP' value='0.2534265'/> <parameter constant='true' id='KPyk_PEP' metaid='metaid_201' name='KPyk_PEP' value='0.3100197'/> <parameter constant='true' id='KR5PI_eq' metaid='metaid_202' name='KR5PI_eq' value='0.4773181'/> <parameter constant='true' id='KRu5P_eq' metaid='metaid_203' name='KRu5P_eq' value='1.406829'/> <parameter constant='true' id='KSDH_SUC_m' metaid='metaid_204' name='KSDH_SUC_m' value='0.1692276'/> <parameter constant='true' id='KSDH_eq' metaid='metaid_205' name='KSDH_eq' value='29.66412'/> <parameter constant='true' id='KTal_eq' metaid='metaid_206' name='KTal_eq' value='1.052304'/> <parameter constant='true' id='KTktA_eq' metaid='metaid_207' name='KTktA_eq' value='1.204173'/> <parameter constant='true' id='KTktB_eq' metaid='metaid_208' name='KTktB_eq' value='9.972692'/> <parameter constant='true' id='KaKGDH_CoA_m' metaid='metaid_209' name='KaKGDH_CoA_m' value='0.003096027'/> <parameter constant='true' id='KaKGDH_NADH_I' metaid='metaid_210' name='KaKGDH_NADH_I' value='0.01793076'/> <parameter constant='true' id='KaKGDH_NAD_m' metaid='metaid_211' name='KaKGDH_NAD_m' value='0.05518559'/> <parameter constant='true' id='KaKGDH_SUC_I' metaid='metaid_212' name='KaKGDH_SUC_I' value='2.070965'/> <parameter constant='true' id='KaKGDH_Z' metaid='metaid_213' name='KaKGDH_Z' value='4.167269'/> <parameter constant='true' id='KaKGDH_aKG_I' metaid='metaid_214' name='KaKGDH_aKG_I' value='1.000517'/> <parameter constant='true' id='KaKGDH_aKG_m' metaid='metaid_215' name='KaKGDH_aKG_m' value='0.2367737'/> <parameter constant='true' id='KaceBAK_Cra' metaid='metaid_216' name='KaceBAK_Cra' value='0.0005399656'/> <parameter constant='true' id='KaceBAK_Crp' metaid='metaid_217' name='KaceBAK_Crp' value='0.5260835'/> <parameter constant='true' id='KaceBAK_DNA' metaid='metaid_218' name='KaceBAK_DNA' value='9.505183e-007'/> <parameter constant='true' id='KaceBAK_GOX' metaid='metaid_219' name='KaceBAK_GOX' value='0.002245525'/> <parameter constant='true' id='KaceBAK_PYR' metaid='metaid_220' name='KaceBAK_PYR' value='2.005099'/> <parameter constant='true' id='KaceBAK_PYRprime' metaid='metaid_221' name='KaceBAK_PYRprime' value='0.002722523'/> <parameter constant='true' id='Kacs_Crp' metaid='metaid_222' name='Kacs_Crp' value='0.00135532'/> <parameter constant='true' id='KcAMPdegr_cAMP' metaid='metaid_223' name='KcAMPdegr_cAMP' value='0.04831624'/> <parameter constant='true' id='KfbaA_Cra' metaid='metaid_224' name='KfbaA_Cra' value='0.003262004'/> <parameter constant='true' id='KfbaA_Crp' metaid='metaid_225' name='KfbaA_Crp' value='0.009480964'/> <parameter constant='true' id='Kfbp_Cra' metaid='metaid_226' name='Kfbp_Cra' value='3.74539e-005'/> <parameter constant='true' id='KfumABC_Crp' metaid='metaid_227' name='KfumABC_Crp' value='0.1485867'/> <parameter constant='true' id='KgapA_Cra' metaid='metaid_228' name='KgapA_Cra' value='0.01605994'/> <parameter constant='true' id='KgapA_Crp' metaid='metaid_229' name='KgapA_Crp' value='0.04748985'/> <parameter constant='true' id='Kglk_Cra' metaid='metaid_230' name='Kglk_Cra' value='1.216156e-008'/> <parameter constant='true' id='KgltA_Crp' metaid='metaid_231' name='KgltA_Crp' value='0.05647961'/> <parameter constant='true' id='KicdA_Cra' metaid='metaid_232' name='KicdA_Cra' value='2.920064e-005'/> <parameter constant='true' id='Kmdh_Crp' metaid='metaid_233' name='Kmdh_Crp' value='0.2135362'/> <parameter constant='true' id='KpckA_Cra' metaid='metaid_234' name='KpckA_Cra' value='0.0001521264'/> <parameter constant='true' id='Kpdh_PdhR' metaid='metaid_235' name='Kpdh_PdhR' value='2.456157e-005'/> <parameter constant='true' id='KpfkA_Cra' metaid='metaid_236' name='KpfkA_Cra' value='9.870306e-009'/> <parameter constant='true' id='KppsA_Cra' metaid='metaid_237' name='KppsA_Cra' value='0.0004875143'/> <parameter constant='true' id='KpykF_Cra' metaid='metaid_238' name='KpykF_Cra' value='7.258365e-005'/> <parameter constant='true' id='KsdhCDAB_Crp' metaid='metaid_239' name='KsdhCDAB_Crp' value='0.08555339'/> <parameter constant='true' id='KsucAB_Crp' metaid='metaid_240' name='KsucAB_Crp' value='0.3094344'/> <parameter constant='true' id='LAceK' metaid='metaid_241' name='LAceK' value='282577400'/> <parameter constant='true' id='LFbp' metaid='metaid_242' name='LFbp' value='4412632'/> <parameter constant='true' id='LICDH' metaid='metaid_243' name='LICDH' value='92.58039'/> <parameter constant='true' id='LIcl' metaid='metaid_244' name='LIcl' value='190810.4'/> <parameter constant='true' id='LMez' metaid='metaid_245' name='LMez' value='238984.7'/> <parameter constant='true' id='LPfk' metaid='metaid_246' name='LPfk' value='1769901'/> <parameter constant='true' id='LPpc' metaid='metaid_247' name='LPpc' value='5647872'/> <parameter constant='true' id='LPps' metaid='metaid_248' name='LPps' value='1.036001e-079'/> <parameter constant='true' id='LPyk' metaid='metaid_249' name='LPyk' value='997.101'/> <parameter constant='true' id='LaceBAK' metaid='metaid_250' name='LaceBAK' value='412.0655'/> <parameter constant='true' id='NAD' metaid='metaid_251' name='NAD' value='2.6'/> <parameter constant='true' id='NADH' metaid='metaid_252' name='NADH' value='0.083'/> <parameter constant='true' id='NADP' metaid='metaid_253' name='NADP' value='0.0021'/> <parameter constant='true' id='NADPH' metaid='metaid_254' name='NADPH' value='0.12'/> <parameter constant='false' id='OP_FADH2' metaid='metaid_255' name='OP_FADH2' value='0'/> <parameter constant='false' id='OP_NADH' metaid='metaid_256' name='OP_NADH' value='0'/> <parameter constant='true' id='POratio' metaid='metaid_257' name='POratio' value='3.480871'/> <parameter constant='true' id='POratio_prime' metaid='metaid_258' name='POratio_prime' value='1.491984'/> <parameter constant='false' id='PdhR' metaid='metaid_259' name='PdhR' value='1.40438009358124e-005'/> <parameter constant='false' id='PdhRPYR' metaid='metaid_260' name='PdhRPYR' value='5.25561990641876e-005'/> <parameter constant='true' id='PdhRtotal' metaid='metaid_261' name='PdhRtotal' value='6.66e-005'/> <parameter constant='true' id='Pi' metaid='metaid_262' name='Pi' value='10'/> <parameter constant='false' id='QEda_pH' metaid='metaid_263' name='QEda_pH' value='1'/> <parameter constant='false' id='QEdd_pH' metaid='metaid_264' name='QEdd_pH' value='1.10921770692398'/> <parameter constant='false' id='SS_Mez' metaid='metaid_265' name='SS_Mez' value='0.005003136535971'/> <parameter constant='true' id='SS_Mez_ACE' metaid='metaid_266' name='SS_Mez_ACE' value='0.01470824'/> <parameter constant='true' id='SS_Mez_GLC' metaid='metaid_267' name='SS_Mez_GLC' value='0.005004239'/> <parameter constant='false' id='SS_Ppc' metaid='metaid_268' name='SS_Ppc' value='0.00493041056144459'/> <parameter constant='true' id='SS_Ppc_ACE' metaid='metaid_269' name='SS_Ppc_ACE' value='0.001470306'/> <parameter constant='true' id='SS_Ppc_GLC' metaid='metaid_270' name='SS_Ppc_GLC' value='0.004931497'/> <parameter constant='true' id='VFba_blf' metaid='metaid_271' name='VFba_blf' value='1.537415'/> <parameter constant='true' id='aceBAK_DNA' metaid='metaid_272' name='aceBAK_DNA' value='5.15e-007'/> <parameter constant='false' id='alphaACE' metaid='metaid_273' name='alphaACE' value='2.12409182589397e-012'/> <parameter constant='false' id='alphaGLC' metaid='metaid_274' name='alphaGLC' value='0.999779693963409'/> <parameter constant='true' id='kATP' metaid='metaid_275' name='kATP' value='1.317324e-005'/> <parameter constant='true' id='kAceKki_cat' metaid='metaid_276' name='kAceKki_cat' value='5.272703e+015'/> <parameter constant='true' id='kAceKph_cat' metaid='metaid_277' name='kAceKph_cat' value='1815770000000'/> <parameter constant='true' id='kAcs_cat' metaid='metaid_278' name='kAcs_cat' value='129214.8'/> <parameter constant='true' id='kBM_ACE_AcCoA' metaid='metaid_279' name='kBM_ACE_AcCoA' value='763.0749'/> <parameter constant='true' id='kBM_ACE_E4P' metaid='metaid_280' name='kBM_ACE_E4P' value='289.6591'/> <parameter constant='true' id='kBM_ACE_F6P' metaid='metaid_281' name='kBM_ACE_F6P' value='368.6207'/> <parameter constant='true' id='kBM_ACE_FUM' metaid='metaid_282' name='kBM_ACE_FUM' value='288.7197'/> <parameter constant='true' id='kBM_ACE_G6P' metaid='metaid_283' name='kBM_ACE_G6P' value='456.4595'/> <parameter constant='true' id='kBM_ACE_GAP' metaid='metaid_284' name='kBM_ACE_GAP' value='420.7377'/> <parameter constant='true' id='kBM_ACE_OAA' metaid='metaid_285' name='kBM_ACE_OAA' value='13117.41'/> <parameter constant='true' id='kBM_ACE_PEP' metaid='metaid_286' name='kBM_ACE_PEP' value='253.0462'/> <parameter constant='true' id='kBM_ACE_PYR' metaid='metaid_287' name='kBM_ACE_PYR' value='12418.11'/> <parameter constant='true' id='kBM_ACE_R5P' metaid='metaid_288' name='kBM_ACE_R5P' value='499.5444'/> <parameter constant='true' id='kBM_ACE_SUC' metaid='metaid_289' name='kBM_ACE_SUC' value='227.0277'/> <parameter constant='true' id='kBM_ACE_aKG' metaid='metaid_290' name='kBM_ACE_aKG' value='323.9118'/> <parameter constant='true' id='kBM_GLC_AcCoA' metaid='metaid_291' name='kBM_GLC_AcCoA' value='2372.522'/> <parameter constant='true' id='kBM_GLC_E4P' metaid='metaid_292' name='kBM_GLC_E4P' value='1513.595'/> <parameter constant='true' id='kBM_GLC_F6P' metaid='metaid_293' name='kBM_GLC_F6P' value='1271.799'/> <parameter constant='true' id='kBM_GLC_FUM' metaid='metaid_294' name='kBM_GLC_FUM' value='3466.978'/> <parameter constant='true' id='kBM_GLC_G6P' metaid='metaid_295' name='kBM_GLC_G6P' value='48.91609'/> <parameter constant='true' id='kBM_GLC_GAP' metaid='metaid_296' name='kBM_GLC_GAP' value='101.6589'/> <parameter constant='true' id='kBM_GLC_OAA' metaid='metaid_297' name='kBM_GLC_OAA' value='23136.8'/> <parameter constant='true' id='kBM_GLC_PEP' metaid='metaid_298' name='kBM_GLC_PEP' value='957.0377'/> <parameter constant='true' id='kBM_GLC_PYR' metaid='metaid_299' name='kBM_GLC_PYR' value='850.9619'/> <parameter constant='true' id='kBM_GLC_R5P' metaid='metaid_300' name='kBM_GLC_R5P' value='307.9703'/> <parameter constant='true' id='kBM_GLC_SUC' metaid='metaid_301' name='kBM_GLC_SUC' value='1897.221'/> <parameter constant='true' id='kBM_GLC_aKG' metaid='metaid_302' name='kBM_GLC_aKG' value='3003.905'/> <parameter constant='true' id='kCS_cat' metaid='metaid_303' name='kCS_cat' value='542514.5'/> <parameter constant='true' id='kFba_cat' metaid='metaid_304' name='kFba_cat' value='6951395'/> <parameter constant='true' id='kFbp_cat' metaid='metaid_305' name='kFbp_cat' value='7855920'/> <parameter constant='true' id='kFum1_cat' metaid='metaid_306' name='kFum1_cat' value='381784.2'/> <parameter constant='true' id='kFum2_cat' metaid='metaid_307' name='kFum2_cat' value='381784.2'/> <parameter constant='true' id='kGAPDH_cat' metaid='metaid_308' name='kGAPDH_cat' value='50451410'/> <parameter constant='true' id='kGlk_cat' metaid='metaid_309' name='kGlk_cat' value='2014895'/> <parameter constant='true' id='kICDH_cat' metaid='metaid_310' name='kICDH_cat' value='85761.25'/> <parameter constant='true' id='kIcl_cat' metaid='metaid_311' name='kIcl_cat' value='942232.9'/> <parameter constant='true' id='kMDH1_cat' metaid='metaid_312' name='kMDH1_cat' value='460152.5'/> <parameter constant='true' id='kMDH2_cat' metaid='metaid_313' name='kMDH2_cat' value='460152.5'/> <parameter constant='true' id='kMS_cat' metaid='metaid_314' name='kMS_cat' value='17033.83'/> <parameter constant='true' id='kMez_cat' metaid='metaid_315' name='kMez_cat' value='368092.9'/> <parameter constant='true' id='kPDH_cat' metaid='metaid_316' name='kPDH_cat' value='48273350'/> <parameter constant='true' id='kPTS1' metaid='metaid_317' name='kPTS1' value='55977.97'/> <parameter constant='true' id='kPck_cat' metaid='metaid_318' name='kPck_cat' value='3445058'/> <parameter constant='true' id='kPfk_cat' metaid='metaid_319' name='kPfk_cat' value='24886040000'/> <parameter constant='true' id='kPpc_cat' metaid='metaid_320' name='kPpc_cat' value='5394640'/> <parameter constant='true' id='kPps_cat' metaid='metaid_321' name='kPps_cat' value='2485.554'/> <parameter constant='true' id='kPyk_cat' metaid='metaid_322' name='kPyk_cat' value='81647.59'/> <parameter constant='true' id='kSDH1_cat' metaid='metaid_323' name='kSDH1_cat' value='19612.48'/> <parameter constant='true' id='kSDH2_cat' metaid='metaid_324' name='kSDH2_cat' value='19612.48'/> <parameter constant='true' id='kaKGDH_cat' metaid='metaid_325' name='kaKGDH_cat' value='701877800'/> <parameter constant='true' id='kaceBAK_cat_IclR' metaid='metaid_326' name='kaceBAK_cat_IclR' value='4.406076'/> <parameter constant='true' id='kdegr' metaid='metaid_327' name='kdegr' value='0.3299041'/> <parameter constant='true' id='kexpr' metaid='metaid_328' name='kexpr' value='7.255423'/> <parameter constant='true' id='kmPTS1' metaid='metaid_329' name='kmPTS1' value='27729.08'/> <parameter constant='false' id='mu' metaid='metaid_330' name='mu' value='0'/> <parameter constant='true' id='nAceK' metaid='metaid_331' name='nAceK' value='2'/> <parameter constant='true' id='nCraFBP' metaid='metaid_332' name='nCraFBP' value='2'/> <parameter constant='true' id='nCrpcAMP' metaid='metaid_333' name='nCrpcAMP' value='1'/> <parameter constant='true' id='nFbp' metaid='metaid_334' name='nFbp' value='4'/> <parameter constant='true' id='nICDH' metaid='metaid_335' name='nICDH' value='2'/> <parameter constant='true' id='nIcl' metaid='metaid_336' name='nIcl' value='4'/> <parameter constant='true' id='nMez' metaid='metaid_337' name='nMez' value='1.992804'/> <parameter constant='true' id='nPdhRPYR' metaid='metaid_338' name='nPdhRPYR' value='1'/> <parameter constant='true' id='nPfk' metaid='metaid_339' name='nPfk' value='4'/> <parameter constant='true' id='nPpc' metaid='metaid_340' name='nPpc' value='3'/> <parameter constant='true' id='nPps' metaid='metaid_341' name='nPps' value='2'/> <parameter constant='true' id='nPyk' metaid='metaid_342' name='nPyk' value='4'/> <parameter constant='true' id='nacs' metaid='metaid_343' name='nacs' value='2.31'/> <parameter constant='true' id='nfumABC' metaid='metaid_344' name='nfumABC' value='0.74'/> <parameter constant='true' id='ngltA' metaid='metaid_345' name='ngltA' value='1.07'/> <parameter constant='true' id='nsdhCDAB' metaid='metaid_346' name='nsdhCDAB' value='0.74'/> <parameter constant='true' id='nsucAB' metaid='metaid_347' name='nsucAB' value='0.74'/> <parameter constant='true' id='pH' metaid='metaid_348' name='pH' value='7.5'/> <parameter constant='true' id='pH_Eda_m' metaid='metaid_349' name='pH_Eda_m' value='10.38134'/> <parameter constant='true' id='pH_Edd_m' metaid='metaid_350' name='pH_Edd_m' value='7.531429'/> <parameter constant='true' id='pK_Eda' metaid='metaid_351' name='pK_Eda' value='36.9653'/> <parameter constant='true' id='pK_Edd' metaid='metaid_352' name='pK_Edd' value='8.743798'/> <parameter constant='true' id='rho' metaid='metaid_353' name='rho' value='564'/> <parameter constant='true' id='v6PGDH_max' metaid='metaid_354' name='v6PGDH_max' value='248056.4'/> <parameter constant='false' id='vATP' metaid='metaid_355' name='vATP' value='0'/> <parameter constant='true' id='vAck_max' metaid='metaid_356' name='vAck_max' value='194925.2'/> <parameter constant='true' id='vCya_max' metaid='metaid_357' name='vCya_max' value='9.454111'/> <parameter constant='true' id='vEda_max' metaid='metaid_358' name='vEda_max' value='667.3321'/> <parameter constant='true' id='vEdd_max' metaid='metaid_359' name='vEdd_max' value='515.4101'/> <parameter constant='false' id='vFum1_max' metaid='metaid_360' name='vFum1_max' value='7986.627672324'/> <parameter constant='false' id='vFum2_max' metaid='metaid_361' name='vFum2_max' value='7986.627672324'/> <parameter constant='true' id='vG6PDH_max' metaid='metaid_362' name='vG6PDH_max' value='16550.76'/> <parameter constant='false' id='vMDH1_max' metaid='metaid_363' name='vMDH1_max' value='5979.6265192'/> <parameter constant='false' id='vMDH2_max' metaid='metaid_364' name='vMDH2_max' value='5979.6265192'/> <parameter constant='true' id='vNonPTS_max' metaid='metaid_365' name='vNonPTS_max' value='3998.132'/> <parameter constant='true' id='vPTS4_max' metaid='metaid_366' name='vPTS4_max' value='3936.295'/> <parameter constant='true' id='vPgi_max' metaid='metaid_367' name='vPgi_max' value='3564062'/> <parameter constant='true' id='vPgl_max' metaid='metaid_368' name='vPgl_max' value='22788.77'/> <parameter constant='true' id='vPta_max' metaid='metaid_369' name='vPta_max' value='5356.956'/> <parameter constant='true' id='vR5PI_max' metaid='metaid_370' name='vR5PI_max' value='32061.27'/> <parameter constant='true' id='vRu5P_max' metaid='metaid_371' name='vRu5P_max' value='12712.83'/> <parameter constant='false' id='vSDH1_max' metaid='metaid_372' name='vSDH1_max' value='2790.94416016'/> <parameter constant='false' id='vSDH2_max' metaid='metaid_373' name='vSDH2_max' value='2790.94416016'/> <parameter constant='true' id='vTal_max' metaid='metaid_374' name='vTal_max' value='71740.74'/> <parameter constant='true' id='vTktA_max' metaid='metaid_375' name='vTktA_max' value='8866.261'/> <parameter constant='true' id='vTktB_max' metaid='metaid_376' name='vTktB_max' value='379795.7'/> <parameter constant='true' id='vaceBAK_Cra_bound' metaid='metaid_377' name='vaceBAK_Cra_bound' value='0.05097713'/> <parameter constant='true' id='vaceBAK_Cra_unbound' metaid='metaid_378' name='vaceBAK_Cra_unbound' value='0.0001756236'/> <parameter constant='true' id='vaceBAK_Crp_bound' metaid='metaid_379' name='vaceBAK_Crp_bound' value='2.183619e-005'/> <parameter constant='true' id='vaceBAK_Crp_unbound' metaid='metaid_380' name='vaceBAK_Crp_unbound' value='0.003464912'/> <parameter constant='true' id='vacs_Crp_bound' metaid='metaid_381' name='vacs_Crp_bound' value='0.0003616674'/> <parameter constant='true' id='vacs_Crp_unbound' metaid='metaid_382' name='vacs_Crp_unbound' value='0'/> <parameter constant='true' id='vcAMPdegr_max' metaid='metaid_383' name='vcAMPdegr_max' value='9.208781'/> <parameter constant='true' id='vfbaA_Cra_bound' metaid='metaid_384' name='vfbaA_Cra_bound' value='0'/> <parameter constant='true' id='vfbaA_Cra_unbound' metaid='metaid_385' name='vfbaA_Cra_unbound' value='0.02516237'/> <parameter constant='true' id='vfbaA_Crp_bound' metaid='metaid_386' name='vfbaA_Crp_bound' value='0.01564531'/> <parameter constant='true' id='vfbaA_Crp_unbound' metaid='metaid_387' name='vfbaA_Crp_unbound' value='0'/> <parameter constant='true' id='vfbp_Cra_bound' metaid='metaid_388' name='vfbp_Cra_bound' value='0.001419009'/> <parameter constant='true' id='vfbp_Cra_unbound' metaid='metaid_389' name='vfbp_Cra_unbound' value='0'/> <parameter constant='true' id='vfumABC_Crp_bound' metaid='metaid_390' name='vfumABC_Crp_bound' value='0.05183032'/> <parameter constant='true' id='vfumABC_Crp_unbound' metaid='metaid_391' name='vfumABC_Crp_unbound' value='0'/> <parameter constant='true' id='vgapA_Cra_bound' metaid='metaid_392' name='vgapA_Cra_bound' value='0'/> <parameter constant='true' id='vgapA_Cra_unbound' metaid='metaid_393' name='vgapA_Cra_unbound' value='0.02204037'/> <parameter constant='true' id='vgapA_Crp_bound' metaid='metaid_394' name='vgapA_Crp_bound' value='0.02999847'/> <parameter constant='true' id='vgapA_Crp_unbound' metaid='metaid_395' name='vgapA_Crp_unbound' value='0'/> <parameter constant='true' id='vglk_Cra_bound' metaid='metaid_396' name='vglk_Cra_bound' value='0.001558566'/> <parameter constant='true' id='vglk_Cra_unbound' metaid='metaid_397' name='vglk_Cra_unbound' value='0.206303'/> <parameter constant='true' id='vgltA_Crp_bound' metaid='metaid_398' name='vgltA_Crp_bound' value='0.02833492'/> <parameter constant='true' id='vgltA_Crp_unbound' metaid='metaid_399' name='vgltA_Crp_unbound' value='0'/> <parameter constant='true' id='vicdA_Cra_bound' metaid='metaid_400' name='vicdA_Cra_bound' value='0.01959302'/> <parameter constant='true' id='vicdA_Cra_unbound' metaid='metaid_401' name='vicdA_Cra_unbound' value='0.007069696'/> <parameter constant='true' id='vmdh_Crp_bound' metaid='metaid_402' name='vmdh_Crp_bound' value='0.1011955'/> <parameter constant='true' id='vmdh_Crp_unbound' metaid='metaid_403' name='vmdh_Crp_unbound' value='0'/> <parameter constant='true' id='vpckA_Cra_bound' metaid='metaid_404' name='vpckA_Cra_bound' value='0.01374898'/> <parameter constant='true' id='vpckA_Cra_unbound' metaid='metaid_405' name='vpckA_Cra_unbound' value='0'/> <parameter constant='true' id='vpdh_PdhR_bound' metaid='metaid_406' name='vpdh_PdhR_bound' value='7.495137e-006'/> <parameter constant='true' id='vpdh_PdhR_unbound' metaid='metaid_407' name='vpdh_PdhR_unbound' value='0.00128144'/> <parameter constant='true' id='vpfkA_Cra_bound' metaid='metaid_408' name='vpfkA_Cra_bound' value='0.001431396'/> <parameter constant='true' id='vpfkA_Cra_unbound' metaid='metaid_409' name='vpfkA_Cra_unbound' value='0.05139497'/> <parameter constant='true' id='vppsA_Cra_bound' metaid='metaid_410' name='vppsA_Cra_bound' value='0.05320138'/> <parameter constant='true' id='vppsA_Cra_unbound' metaid='metaid_411' name='vppsA_Cra_unbound' value='0'/> <parameter constant='true' id='vpykF_Cra_bound' metaid='metaid_412' name='vpykF_Cra_bound' value='4.303589e-005'/> <parameter constant='true' id='vpykF_Cra_unbound' metaid='metaid_413' name='vpykF_Cra_unbound' value='0.01127939'/> <parameter constant='true' id='vsdhCDAB_Crp_bound' metaid='metaid_414' name='vsdhCDAB_Crp_bound' value='0.2441848'/> <parameter constant='true' id='vsdhCDAB_Crp_unbound' metaid='metaid_415' name='vsdhCDAB_Crp_unbound' value='0'/> <parameter constant='true' id='vsucAB_Crp_bound' metaid='metaid_416' name='vsucAB_Crp_bound' value='0.02388588'/> <parameter constant='true' id='vsucAB_Crp_unbound' metaid='metaid_417' name='vsucAB_Crp_unbound' value='0'/> </listOfParameters> <listOfRules> <assignmentRule metaid='metaid_440' variable='EIIA'> <math xmlns='http://www.w3.org/1998/Math/MathML'> <apply> <minus/> <ci> EIIAtotal </ci> <ci> EIIAP </ci> </apply> </math> </assignmentRule> <assignmentRule metaid='metaid_421' variable='A'> <math xmlns='http://www.w3.org/1998/Math/MathML'> <apply> <plus/> <cn> 1 </cn> <apply> <divide/> <ci> PEP </ci> <ci> KPfk_PEP </ci> </apply> <apply> <divide/> <ci> ADP </ci> <ci> KPfk_ADP_b </ci> </apply> <apply> <divide/> <ci> AMP </ci> <ci> KPfk_AMP_b </ci> </apply> </apply> </math> </assignmentRule> <assignmentRule metaid='metaid_427' variable='B'> <math xmlns='http://www.w3.org/1998/Math/MathML'> <apply> <plus/> <cn> 1 </cn> <apply> <divide/> <ci> ADP </ci> <ci> KPfk_ADP_a </ci> </apply> <apply> <divide/> <ci> AMP </ci> <ci> KPfk_AMP_a </ci> </apply> </apply> </math> </assignmentRule> <assignmentRule metaid='metaid_419' variable='CraFBP'> <math xmlns='http://www.w3.org/1998/Math/MathML'> <apply> <divide/> <apply> <times/> <ci> Cratotal </ci> <apply> <power/> <ci> FBP </ci> <ci> nCraFBP </ci> </apply> </apply> <apply> <plus/> <apply> <power/> <ci> FBP </ci> <ci> nCraFBP </ci> </apply> <apply> <power/> <ci> KCraFBP </ci> <ci> nCraFBP </ci> </apply> </apply> </apply> </math> </assignmentRule> <assignmentRule metaid='metaid_438' variable='Cra'> <math xmlns='http://www.w3.org/1998/Math/MathML'> <apply> <minus/> <ci> Cratotal </ci> <ci> CraFBP </ci> </apply> </math> </assignmentRule> <assignmentRule metaid='metaid_434' variable='CrpcAMP'> <math xmlns='http://www.w3.org/1998/Math/MathML'> <apply> <divide/> <apply> <times/> <ci> Crptotal </ci> <apply> <power/> <ci> cAMP </ci> <ci> nCrpcAMP </ci> </apply> </apply> <apply> <plus/> <apply> <power/> <ci> cAMP </ci> <ci> nCrpcAMP </ci> </apply> <apply> <power/> <ci> KCrpcAMP </ci> <ci> nCrpcAMP </ci> </apply> </apply> </apply> </math> </assignmentRule> <assignmentRule metaid='metaid_441' variable='Crp'> <math xmlns='http://www.w3.org/1998/Math/MathML'> <apply> <minus/> <ci> Crptotal </ci> <ci> CrpcAMP </ci> </apply> </math> </assignmentRule> <assignmentRule metaid='metaid_429' variable='H'> <math xmlns='http://www.w3.org/1998/Math/MathML'> <apply> <times/> <apply> <power/> <cn> 10 </cn> <apply> <minus/> <ci> pH </ci> </apply> </apply> <cn> 1000 </cn> </apply> </math> </assignmentRule> <assignmentRule metaid='metaid_422' variable='OP_FADH2'> <math xmlns='http://www.w3.org/1998/Math/MathML'> <apply> <times/> <ci> vE_SDH </ci> <ci> POratio_prime </ci> </apply> </math> </assignmentRule> <assignmentRule metaid='metaid_430' variable='OP_NADH'> <math xmlns='http://www.w3.org/1998/Math/MathML'> <apply> <times/> <apply> <plus/> <ci> vE_GAPDH </ci> <ci> vE_PDH </ci> <ci> vE_aKGDH </ci> <ci> vE_MDH </ci> </apply> <ci> POratio </ci> </apply> </math> </assignmentRule> <assignmentRule metaid='metaid_425' variable='PdhRPYR'> <math xmlns='http://www.w3.org/1998/Math/MathML'> <apply> <divide/> <apply> <times/> <ci> PdhRtotal </ci> <apply> <power/> <ci> PYR </ci> <ci> nPdhRPYR </ci> </apply> </apply> <apply> <plus/> <apply> <power/> <ci> PYR </ci> <ci> nPdhRPYR </ci> </apply> <apply> <power/> <ci> KPdhRPYR </ci> <ci> nPdhRPYR </ci> </apply> </apply> </apply> </math> </assignmentRule> <assignmentRule metaid='metaid_418' variable='PdhR'> <math xmlns='http://www.w3.org/1998/Math/MathML'> <apply> <minus/> <ci> PdhRtotal </ci> <ci> PdhRPYR </ci> </apply> </math> </assignmentRule> <assignmentRule metaid='metaid_428' variable='QEda_pH'> <math xmlns='http://www.w3.org/1998/Math/MathML'> <apply> <plus/> <cn> 1 </cn> <apply> <divide/> <apply> <times/> <cn> 2 </cn> <apply> <power/> <cn> 10 </cn> <apply> <minus/> <ci> pH_Eda_m </ci> <ci> pK_Eda </ci> </apply> </apply> </apply> <apply> <plus/> <cn> 1 </cn> <apply> <power/> <cn> 10 </cn> <apply> <minus/> <ci> pH </ci> <ci> pK_Eda </ci> </apply> </apply> <apply> <power/> <cn> 10 </cn> <apply> <minus/> <apply> <minus/> <apply> <times/> <cn> 2 </cn> <ci> pH_Eda_m </ci> </apply> <ci> pH </ci> </apply> <ci> pK_Eda </ci> </apply> </apply> </apply> </apply> </apply> </math> </assignmentRule> <assignmentRule metaid='metaid_426' variable='QEdd_pH'> <math xmlns='http://www.w3.org/1998/Math/MathML'> <apply> <plus/> <cn> 1 </cn> <apply> <divide/> <apply> <times/> <cn> 2 </cn> <apply> <power/> <cn> 10 </cn> <apply> <minus/> <ci> pH_Edd_m </ci> <ci> pK_Edd </ci> </apply> </apply> </apply> <apply> <plus/> <cn> 1 </cn> <apply> <power/> <cn> 10 </cn> <apply> <minus/> <ci> pH </ci> <ci> pK_Edd </ci> </apply> </apply> <apply> <power/> <cn> 10 </cn> <apply> <minus/> <apply> <minus/> <apply> <times/> <cn> 2 </cn> <ci> pH_Edd_m </ci> </apply> <ci> pH </ci> </apply> <ci> pK_Edd </ci> </apply> </apply> </apply> </apply> </apply> </math> </assignmentRule> <assignmentRule metaid='metaid_431' variable='alphaGLC'> <math xmlns='http://www.w3.org/1998/Math/MathML'> <apply> <divide/> <ci> GLCex </ci> <apply> <plus/> <ci> GLCex </ci> <ci> KPTS_GLC </ci> </apply> </apply> </math> </assignmentRule> <assignmentRule metaid='metaid_433' variable='alphaACE'> <math xmlns='http://www.w3.org/1998/Math/MathML'> <apply> <times/> <apply> <divide/> <ci> ACEex </ci> <apply> <plus/> <ci> ACEex </ci> <ci> KAcs_ACE </ci> </apply> </apply> <apply> <minus/> <cn> 1 </cn> <ci> alphaGLC </ci> </apply> </apply> </math> </assignmentRule> <assignmentRule metaid='metaid_443' variable='SS_Mez'> <math xmlns='http://www.w3.org/1998/Math/MathML'> <apply> <plus/> <apply> <times/> <ci> alphaGLC </ci> <ci> SS_Mez_GLC </ci> </apply> <apply> <times/> <ci> alphaACE </ci> <ci> SS_Mez_ACE </ci> </apply> </apply> </math> </assignmentRule> <assignmentRule metaid='metaid_437' variable='SS_Ppc'> <math xmlns='http://www.w3.org/1998/Math/MathML'> <apply> <plus/> <apply> <times/> <ci> alphaGLC </ci> <ci> SS_Ppc_GLC </ci> </apply> <apply> <times/> <ci> alphaACE </ci> <ci> SS_Ppc_ACE </ci> </apply> </apply> </math> </assignmentRule> <assignmentRule metaid='metaid_432' variable='vATP'> <math xmlns='http://www.w3.org/1998/Math/MathML'> <apply> <minus/> <apply> <minus/> <apply> <minus/> <apply> <plus/> <apply> <minus/> <apply> <plus/> <apply> <minus/> <apply> <plus/> <apply> <minus/> <apply> <minus/> <apply> <plus/> <ci> OP_NADH </ci> <ci> OP_FADH2 </ci> </apply> <ci> vE_Glk </ci> </apply> <ci> vE_Pfk </ci> </apply> <ci> vE_GAPDH </ci> <ci> vE_Pyk </ci> </apply> <ci> vE_Pps </ci> </apply> <ci> vE_Ack </ci> </apply> <ci> vE_Acs </ci> </apply> <ci> vE_aKGDH </ci> </apply> <ci> vE_Pck </ci> </apply> <ci> vE_AceKki </ci> </apply> <ci> vE_Cya </ci> </apply> </math> </assignmentRule> <assignmentRule metaid='metaid_424' variable='mu'> <math xmlns='http://www.w3.org/1998/Math/MathML'> <apply> <times/> <ci> kATP </ci> <ci> vATP </ci> </apply> </math> </assignmentRule> <assignmentRule metaid='metaid_420' variable='vFum1_max'> <math xmlns='http://www.w3.org/1998/Math/MathML'> <apply> <times/> <ci> Fum </ci> <ci> kFum1_cat </ci> </apply> </math> </assignmentRule> <assignmentRule metaid='metaid_439' variable='vFum2_max'> <math xmlns='http://www.w3.org/1998/Math/MathML'> <apply> <times/> <ci> Fum </ci> <ci> kFum2_cat </ci> </apply> </math> </assignmentRule> <assignmentRule metaid='metaid_442' variable='vMDH1_max'> <math xmlns='http://www.w3.org/1998/Math/MathML'> <apply> <times/> <ci> MDH </ci> <ci> kMDH1_cat </ci> </apply> </math> </assignmentRule> <assignmentRule metaid='metaid_436' variable='vMDH2_max'> <math xmlns='http://www.w3.org/1998/Math/MathML'> <apply> <times/> <ci> MDH </ci> <ci> kMDH2_cat </ci> </apply> </math> </assignmentRule> <assignmentRule metaid='metaid_423' variable='vSDH1_max'> <math xmlns='http://www.w3.org/1998/Math/MathML'> <apply> <times/> <ci> SDH </ci> <ci> kSDH1_cat </ci> </apply> </math> </assignmentRule> <assignmentRule metaid='metaid_435' variable='vSDH2_max'> <math xmlns='http://www.w3.org/1998/Math/MathML'> <apply> <times/> <ci> SDH </ci> <ci> kSDH2_cat </ci> </apply> </math> </assignmentRule> </listOfRules> <listOfReactions> <reaction fast='false' id='vBM_AcCoA' metaid='metaid_445' name='vBM_AcCoA' reversible='true'> <listOfReactants> <speciesReference constant='true' metaid='metaid_444' species='AcCoA' stoichiometry='1'/> </listOfReactants> <kineticLaw> <math xmlns='http://www.w3.org/1998/Math/MathML'> <apply> <times/> <ci> default </ci> <apply> <ci> Function_for_vBM_AcCoA </ci> <ci> AcCoA </ci> <ci> alphaACE </ci> <ci> alphaGLC </ci> <ci> default </ci> <ci> kBM_ACE_AcCoA </ci> <ci> kBM_GLC_AcCoA </ci> </apply> </apply> </math> </kineticLaw> </reaction> <reaction fast='false' id='vBM_E4P' metaid='metaid_447' name='vBM_E4P' reversible='true'> <listOfReactants> <speciesReference constant='true' metaid='metaid_446' species='E4P' stoichiometry='1'/> </listOfReactants> <kineticLaw> <math xmlns='http://www.w3.org/1998/Math/MathML'> <apply> <times/> <ci> default </ci> <apply> <ci> Function_for_vBM_E4P </ci> <ci> E4P </ci> <ci> alphaACE </ci> <ci> alphaGLC </ci> <ci> default </ci> <ci> kBM_ACE_E4P </ci> <ci> kBM_GLC_E4P </ci> </apply> </apply> </math> </kineticLaw> </reaction> <reaction fast='false' id='vBM_F6P' metaid='metaid_449' name='vBM_F6P' reversible='true'> <listOfReactants> <speciesReference constant='true' metaid='metaid_448' species='F6P' stoichiometry='1'/> </listOfReactants> <kineticLaw> <math xmlns='http://www.w3.org/1998/Math/MathML'> <apply> <times/> <ci> default </ci> <apply> <ci> Function_for_vBM_F6P </ci> <ci> F6P </ci> <ci> alphaACE </ci> <ci> alphaGLC </ci> <ci> default </ci> <ci> kBM_ACE_F6P </ci> <ci> kBM_GLC_F6P </ci> </apply> </apply> </math> </kineticLaw> </reaction> <reaction fast='false' id='vBM_FUM' metaid='metaid_451' name='vBM_FUM' reversible='true'> <listOfReactants> <speciesReference constant='true' metaid='metaid_450' species='FUM' stoichiometry='1'/> </listOfReactants> <kineticLaw> <math xmlns='http://www.w3.org/1998/Math/MathML'> <apply> <times/> <ci> default </ci> <apply> <ci> Function_for_vBM_FUM </ci> <ci> FUM </ci> <ci> alphaACE </ci> <ci> alphaGLC </ci> <ci> default </ci> <ci> kBM_ACE_FUM </ci> <ci> kBM_GLC_FUM </ci> </apply> </apply> </math> </kineticLaw> </reaction> <reaction fast='false' id='vBM_G6P' metaid='metaid_453' name='vBM_G6P' reversible='true'> <listOfReactants> <speciesReference constant='true' metaid='metaid_452' species='G6P' stoichiometry='1'/> </listOfReactants> <kineticLaw> <math xmlns='http://www.w3.org/1998/Math/MathML'> <apply> <times/> <ci> default </ci> <apply> <ci> Function_for_vBM_G6P </ci> <ci> G6P </ci> <ci> alphaACE </ci> <ci> alphaGLC </ci> <ci> default </ci> <ci> kBM_ACE_G6P </ci> <ci> kBM_GLC_G6P </ci> </apply> </apply> </math> </kineticLaw> </reaction> <reaction fast='false' id='vBM_GAP' metaid='metaid_455' name='vBM_GAP' reversible='true'> <listOfReactants> <speciesReference constant='true' metaid='metaid_454' species='GAP' stoichiometry='1'/> </listOfReactants> <kineticLaw> <math xmlns='http://www.w3.org/1998/Math/MathML'> <apply> <times/> <ci> default </ci> <apply> <ci> Function_for_vBM_GAP </ci> <ci> GAP </ci> <ci> alphaACE </ci> <ci> alphaGLC </ci> <ci> default </ci> <ci> kBM_ACE_GAP </ci> <ci> kBM_GLC_GAP </ci> </apply> </apply> </math> </kineticLaw> </reaction> <reaction fast='false' id='vBM_OAA' metaid='metaid_457' name='vBM_OAA' reversible='true'> <listOfReactants> <speciesReference constant='true' metaid='metaid_456' species='OAA' stoichiometry='1'/> </listOfReactants> <kineticLaw> <math xmlns='http://www.w3.org/1998/Math/MathML'> <apply> <times/> <ci> default </ci> <apply> <ci> Function_for_vBM_OAA </ci> <ci> OAA </ci> <ci> alphaACE </ci> <ci> alphaGLC </ci> <ci> default </ci> <ci> kBM_ACE_OAA </ci> <ci> kBM_GLC_OAA </ci> </apply> </apply> </math> </kineticLaw> </reaction> <reaction fast='false' id='vBM_PEP' metaid='metaid_459' name='vBM_PEP' reversible='true'> <listOfReactants> <speciesReference constant='true' metaid='metaid_458' species='PEP' stoichiometry='1'/> </listOfReactants> <kineticLaw> <math xmlns='http://www.w3.org/1998/Math/MathML'> <apply> <times/> <ci> default </ci> <apply> <ci> Function_for_vBM_PEP </ci> <ci> PEP </ci> <ci> alphaACE </ci> <ci> alphaGLC </ci> <ci> default </ci> <ci> kBM_ACE_PEP </ci> <ci> kBM_GLC_PEP </ci> </apply> </apply> </math> </kineticLaw> </reaction> <reaction fast='false' id='vBM_PYR' metaid='metaid_461' name='vBM_PYR' reversible='true'> <listOfReactants> <speciesReference constant='true' metaid='metaid_460' species='PYR' stoichiometry='1'/> </listOfReactants> <kineticLaw> <math xmlns='http://www.w3.org/1998/Math/MathML'> <apply> <times/> <ci> default </ci> <apply> <ci> Function_for_vBM_PYR </ci> <ci> PYR </ci> <ci> alphaACE </ci> <ci> alphaGLC </ci> <ci> default </ci> <ci> kBM_ACE_PYR </ci> <ci> kBM_GLC_PYR </ci> </apply> </apply> </math> </kineticLaw> </reaction> <reaction fast='false' id='vBM_R5P' metaid='metaid_463' name='vBM_R5P' reversible='true'> <listOfReactants> <speciesReference constant='true' metaid='metaid_462' species='R5P' stoichiometry='1'/> </listOfReactants> <kineticLaw> <math xmlns='http://www.w3.org/1998/Math/MathML'> <apply> <times/> <ci> default </ci> <apply> <ci> Function_for_vBM_R5P </ci> <ci> R5P </ci> <ci> alphaACE </ci> <ci> alphaGLC </ci> <ci> default </ci> <ci> kBM_ACE_R5P </ci> <ci> kBM_GLC_R5P </ci> </apply> </apply> </math> </kineticLaw> </reaction> <reaction fast='false' id='vBM_SUC' metaid='metaid_465' name='vBM_SUC' reversible='true'> <listOfReactants> <speciesReference constant='true' metaid='metaid_464' species='SUC' stoichiometry='1'/> </listOfReactants> <kineticLaw> <math xmlns='http://www.w3.org/1998/Math/MathML'> <apply> <times/> <ci> default </ci> <apply> <ci> Function_for_vBM_SUC </ci> <ci> SUC </ci> <ci> alphaACE </ci> <ci> alphaGLC </ci> <ci> default </ci> <ci> kBM_ACE_SUC </ci> <ci> kBM_GLC_SUC </ci> </apply> </apply> </math> </kineticLaw> </reaction> <reaction fast='false' id='vBM_aKG' metaid='metaid_467' name='vBM_aKG' reversible='true'> <listOfReactants> <speciesReference constant='true' metaid='metaid_466' species='aKG' stoichiometry='1'/> </listOfReactants> <kineticLaw> <math xmlns='http://www.w3.org/1998/Math/MathML'> <apply> <times/> <ci> default </ci> <apply> <ci> Function_for_vBM_aKG </ci> <ci> aKG </ci> <ci> alphaACE </ci> <ci> alphaGLC </ci> <ci> default </ci> <ci> kBM_ACE_aKG </ci> <ci> kBM_GLC_aKG </ci> </apply> </apply> </math> </kineticLaw> </reaction> <reaction fast='false' id='vD_6PG' metaid='metaid_469' name='vD_6PG' reversible='true'> <listOfReactants> <speciesReference constant='true' metaid='metaid_468' species='sixPG' stoichiometry='1'/> </listOfReactants> <kineticLaw> <math xmlns='http://www.w3.org/1998/Math/MathML'> <apply> <times/> <ci> default </ci> <apply> <ci> Function_for_vD_6PG </ci> <ci> default </ci> <ci> mu </ci> <ci> sixPG </ci> </apply> </apply> </math> </kineticLaw> </reaction> <reaction fast='false' id='vD_6PGL' metaid='metaid_471' name='vD_6PGL' reversible='true'> <listOfReactants> <speciesReference constant='true' metaid='metaid_470' species='sixPGL' stoichiometry='1'/> </listOfReactants> <kineticLaw> <math xmlns='http://www.w3.org/1998/Math/MathML'> <apply> <times/> <ci> default </ci> <apply> <ci> Function_for_vD_6PGL </ci> <ci> default </ci> <ci> mu </ci> <ci> sixPGL </ci> </apply> </apply> </math> </kineticLaw> </reaction> <reaction fast='false' id='vD_ACEex' metaid='metaid_473' name='vD_ACEex' reversible='true'> <listOfReactants> <speciesReference constant='true' metaid='metaid_472' species='ACEex' stoichiometry='1'/> </listOfReactants> <kineticLaw> <math xmlns='http://www.w3.org/1998/Math/MathML'> <apply> <times/> <ci> default </ci> <apply> <ci> Function_for_vD_ACEex </ci> <ci> ACEex </ci> <ci> D </ci> <ci> default </ci> </apply> </apply> </math> </kineticLaw> </reaction> <reaction fast='false' id='vD_AcCoA' metaid='metaid_475' name='vD_AcCoA' reversible='true'> <listOfReactants> <speciesReference constant='true' metaid='metaid_474' species='AcCoA' stoichiometry='1'/> </listOfReactants> <kineticLaw> <math xmlns='http://www.w3.org/1998/Math/MathML'> <apply> <times/> <ci> default </ci> <apply> <ci> Function_for_vD_AcCoA </ci> <ci> AcCoA </ci> <ci> default </ci> <ci> mu </ci> </apply> </apply> </math> </kineticLaw> </reaction> <reaction fast='false' id='vD_AcP' metaid='metaid_477' name='vD_AcP' reversible='true'> <listOfReactants> <speciesReference constant='true' metaid='metaid_476' species='AcP' stoichiometry='1'/> </listOfReactants> <kineticLaw> <math xmlns='http://www.w3.org/1998/Math/MathML'> <apply> <times/> <ci> default </ci> <apply> <ci> Function_for_vD_AcP </ci> <ci> AcP </ci> <ci> default </ci> <ci> mu </ci> </apply> </apply> </math> </kineticLaw> </reaction> <reaction fast='false' id='vD_AceK' metaid='metaid_479' name='vD_AceK' reversible='true'> <listOfReactants> <speciesReference constant='true' metaid='metaid_478' species='AceK' stoichiometry='1'/> </listOfReactants> <kineticLaw> <math xmlns='http://www.w3.org/1998/Math/MathML'> <apply> <times/> <ci> default </ci> <apply> <ci> Function_for_vD_AceK </ci> <ci> AceK </ci> <ci> default </ci> <ci> kdegr </ci> <ci> mu </ci> </apply> </apply> </math> </kineticLaw> </reaction> <reaction fast='false' id='vD_Acs' metaid='metaid_481' name='vD_Acs' reversible='true'> <listOfReactants> <speciesReference constant='true' metaid='metaid_480' species='Acs' stoichiometry='1'/> </listOfReactants> <kineticLaw> <math xmlns='http://www.w3.org/1998/Math/MathML'> <apply> <times/> <ci> default </ci> <apply> <ci> Function_for_vD_Acs </ci> <ci> Acs </ci> <ci> default </ci> <ci> kdegr </ci> <ci> mu </ci> </apply> </apply> </math> </kineticLaw> </reaction> <reaction fast='false' id='vD_CS' metaid='metaid_483' name='vD_CS' reversible='true'> <listOfReactants> <speciesReference constant='true' metaid='metaid_482' species='CS' stoichiometry='1'/> </listOfReactants> <kineticLaw> <math xmlns='http://www.w3.org/1998/Math/MathML'> <apply> <times/> <ci> default </ci> <apply> <ci> Function_for_vD_CS </ci> <ci> CS </ci> <ci> default </ci> <ci> kdegr </ci> <ci> mu </ci> </apply> </apply> </math> </kineticLaw> </reaction> <reaction fast='false' id='vD_E4P' metaid='metaid_485' name='vD_E4P' reversible='true'> <listOfReactants> <speciesReference constant='true' metaid='metaid_484' species='E4P' stoichiometry='1'/> </listOfReactants> <kineticLaw> <math xmlns='http://www.w3.org/1998/Math/MathML'> <apply> <times/> <ci> default </ci> <apply> <ci> Function_for_vD_E4P </ci> <ci> E4P </ci> <ci> default </ci> <ci> mu </ci> </apply> </apply> </math> </kineticLaw> </reaction> <reaction fast='false' id='vD_F6P' metaid='metaid_487' name='vD_F6P' reversible='true'> <listOfReactants> <speciesReference constant='true' metaid='metaid_486' species='F6P' stoichiometry='1'/> </listOfReactants> <kineticLaw> <math xmlns='http://www.w3.org/1998/Math/MathML'> <apply> <times/> <ci> default </ci> <apply> <ci> Function_for_vD_F6P </ci> <ci> F6P </ci> <ci> default </ci> <ci> mu </ci> </apply> </apply> </math> </kineticLaw> </reaction> <reaction fast='false' id='vD_FBP' metaid='metaid_489' name='vD_FBP' reversible='true'> <listOfReactants> <speciesReference constant='true' metaid='metaid_488' species='FBP' stoichiometry='1'/> </listOfReactants> <kineticLaw> <math xmlns='http://www.w3.org/1998/Math/MathML'> <apply> <times/> <ci> default </ci> <apply> <ci> Function_for_vD_FBP </ci> <ci> FBP </ci> <ci> default </ci> <ci> mu </ci> </apply> </apply> </math> </kineticLaw> </reaction> <reaction fast='false' id='vD_FUM' metaid='metaid_491' name='vD_FUM' reversible='true'> <annotation> <COPASI xmlns='http://www.copasi.org/static/sbml'> <rdf:RDF xmlns:dcterms='http://purl.org/dc/terms/' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#'> <rdf:Description rdf:about='#metaid_491'> <dcterms:created> <rdf:Description> <dcterms:W3CDTF>2015-12-31T15:19:58Z</dcterms:W3CDTF> </rdf:Description> </dcterms:created> </rdf:Description> </rdf:RDF> </COPASI> </annotation> <listOfReactants> <speciesReference constant='true' metaid='metaid_490' species='FUM' stoichiometry='1'/> </listOfReactants> <kineticLaw> <math xmlns='http://www.w3.org/1998/Math/MathML'> <apply> <times/> <ci> default </ci> <apply> <ci> Function_for_vD_FUM </ci> <ci> FUM </ci> <ci> default </ci> <ci> mu </ci> </apply> </apply> </math> </kineticLaw> </reaction> <reaction fast='false' id='vD_Fba' metaid='metaid_493' name='vD_Fba' reversible='true'> <listOfReactants> <speciesReference constant='true' metaid='metaid_492' species='Fba' stoichiometry='1'/> </listOfReactants> <kineticLaw> <math xmlns='http://www.w3.org/1998/Math/MathML'> <apply> <times/> <ci> default </ci> <apply> <ci> Function_for_vD_Fba </ci> <ci> Fba </ci> <ci> default </ci> <ci> kdegr </ci> <ci> mu </ci> </apply> </apply> </math> </kineticLaw> </reaction> <reaction fast='false' id='vD_Fbp' metaid='metaid_495' name='vD_Fbp' reversible='true'> <listOfReactants> <speciesReference constant='true' metaid='metaid_494' species='Fbp' stoichiometry='1'/> </listOfReactants> <kineticLaw> <math xmlns='http://www.w3.org/1998/Math/MathML'> <apply> <times/> <ci> default </ci> <apply> <ci> Function_for_vD_Fbp </ci> <ci> Fbp </ci> <ci> default </ci> <ci> kdegr </ci> <ci> mu </ci> </apply> </apply> </math> </kineticLaw> </reaction> <reaction fast='false' id='vD_Fum' metaid='metaid_497' name='vD_Fum' reversible='true'> <annotation> <COPASI xmlns='http://www.copasi.org/static/sbml'> <rdf:RDF xmlns:dcterms='http://purl.org/dc/terms/' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#'> <rdf:Description rdf:about='#metaid_497'> <dcterms:created> <rdf:Description> <dcterms:W3CDTF>2015-12-31T15:19:59Z</dcterms:W3CDTF> </rdf:Description> </dcterms:created> </rdf:Description> </rdf:RDF> </COPASI> </annotation> <listOfReactants> <speciesReference constant='true' metaid='metaid_496' species='Fum' stoichiometry='1'/> </listOfReactants> <kineticLaw> <math xmlns='http://www.w3.org/1998/Math/MathML'> <apply> <times/> <ci> default </ci> <apply> <ci> Function_for_vD_Fum </ci> <ci> Fum </ci> <ci> default </ci> <ci> kdegr </ci> <ci> mu </ci> </apply> </apply> </math> </kineticLaw> </reaction> <reaction fast='false' id='vD_G6P' metaid='metaid_499' name='vD_G6P' reversible='true'> <listOfReactants> <speciesReference constant='true' metaid='metaid_498' species='G6P' stoichiometry='1'/> </listOfReactants> <kineticLaw> <math xmlns='http://www.w3.org/1998/Math/MathML'> <apply> <times/> <ci> default </ci> <apply> <ci> Function_for_vD_G6P </ci> <ci> G6P </ci> <ci> default </ci> <ci> mu </ci> </apply> </apply> </math> </kineticLaw> </reaction> <reaction fast='false' id='vD_GAP' metaid='metaid_501' name='vD_GAP' reversible='true'> <listOfReactants> <speciesReference constant='true' metaid='metaid_500' species='GAP' stoichiometry='1'/> </listOfReactants> <kineticLaw> <math xmlns='http://www.w3.org/1998/Math/MathML'> <apply> <times/> <ci> default </ci> <apply> <ci> Function_for_vD_GAP </ci> <ci> GAP </ci> <ci> default </ci> <ci> mu </ci> </apply> </apply> </math> </kineticLaw> </reaction> <reaction fast='false' id='vD_GAPDH' metaid='metaid_503' name='vD_GAPDH' reversible='true'> <annotation> <COPASI xmlns='http://www.copasi.org/static/sbml'> <rdf:RDF xmlns:dcterms='http://purl.org/dc/terms/' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#'> <rdf:Description rdf:about='#metaid_503'> <dcterms:created> <rdf:Description> <dcterms:W3CDTF>2015-12-31T15:19:44Z</dcterms:W3CDTF> </rdf:Description> </dcterms:created> </rdf:Description> </rdf:RDF> </COPASI> </annotation> <listOfReactants> <speciesReference constant='true' metaid='metaid_502' species='GAPDH' stoichiometry='1'/> </listOfReactants> <kineticLaw> <math xmlns='http://www.w3.org/1998/Math/MathML'> <apply> <times/> <ci> default </ci> <apply> <ci> Function_for_vD_GAPDH </ci> <ci> GAPDH </ci> <ci> default </ci> <ci> kdegr </ci> <ci> mu </ci> </apply> </apply> </math> </kineticLaw> </reaction> <reaction fast='false' id='vD_GLC' metaid='metaid_505' name='vD_GLC' reversible='true'> <listOfReactants> <speciesReference constant='true' metaid='metaid_504' species='GLC' stoichiometry='1'/> </listOfReactants> <kineticLaw> <math xmlns='http://www.w3.org/1998/Math/MathML'> <apply> <times/> <ci> default </ci> <apply> <ci> Function_for_vD_GLC </ci> <ci> GLC </ci> <ci> default </ci> <ci> mu </ci> </apply> </apply> </math> </kineticLaw> </reaction> <reaction fast='false' id='vD_GLCex' metaid='metaid_507' name='vD_GLCex' reversible='true'> <listOfReactants> <speciesReference constant='true' metaid='metaid_506' species='GLCex' stoichiometry='1'/> </listOfReactants> <kineticLaw> <math xmlns='http://www.w3.org/1998/Math/MathML'> <apply> <times/> <ci> default </ci> <apply> <ci> Function_for_vD_GLCex </ci> <ci> D </ci> <ci> GLCex </ci> <ci> default </ci> </apply> </apply> </math> </kineticLaw> </reaction> <reaction fast='false' id='vD_GLCfeed' metaid='metaid_509' name='vD_GLCfeed' reversible='true'> <listOfReactants> <speciesReference constant='true' metaid='metaid_508' species='GLCfeed' stoichiometry='1'/> </listOfReactants> <kineticLaw> <math xmlns='http://www.w3.org/1998/Math/MathML'> <apply> <times/> <ci> default </ci> <apply> <ci> Function_for_vD_GLCfeed </ci> <ci> D </ci> <ci> GLCfeed </ci> <ci> default </ci> </apply> </apply> </math> </kineticLaw> </reaction> <reaction fast='false' id='vD_GOX' metaid='metaid_511' name='vD_GOX' reversible='true'> <listOfReactants> <speciesReference constant='true' metaid='metaid_510' species='GOX' stoichiometry='1'/> </listOfReactants> <kineticLaw> <math xmlns='http://www.w3.org/1998/Math/MathML'> <apply> <times/> <ci> default </ci> <apply> <ci> Function_for_vD_GOX </ci> <ci> GOX </ci> <ci> default </ci> <ci> mu </ci> </apply> </apply> </math> </kineticLaw> </reaction> <reaction fast='false' id='vD_Glk' metaid='metaid_513' name='vD_Glk' reversible='true'> <listOfReactants> <speciesReference constant='true' metaid='metaid_512' species='Glk' stoichiometry='1'/> </listOfReactants> <kineticLaw> <math xmlns='http://www.w3.org/1998/Math/MathML'> <apply> <times/> <ci> default </ci> <apply> <ci> Function_for_vD_Glk </ci> <ci> Glk </ci> <ci> default </ci> <ci> kdegr </ci> <ci> mu </ci> </apply> </apply> </math> </kineticLaw> </reaction> <reaction fast='false' id='vD_ICDH' metaid='metaid_515' name='vD_ICDH' reversible='true'> <listOfReactants> <speciesReference constant='true' metaid='metaid_514' species='ICDH' stoichiometry='1'/> </listOfReactants> <kineticLaw> <math xmlns='http://www.w3.org/1998/Math/MathML'> <apply> <times/> <ci> default </ci> <apply> <ci> Function_for_vD_ICDH </ci> <ci> ICDH </ci> <ci> default </ci> <ci> kdegr </ci> <ci> mu </ci> </apply> </apply> </math> </kineticLaw> </reaction> <reaction fast='false' id='vD_ICDHP' metaid='metaid_517' name='vD_ICDHP' reversible='true'> <listOfReactants> <speciesReference constant='true' metaid='metaid_516' species='ICDHP' stoichiometry='1'/> </listOfReactants> <kineticLaw> <math xmlns='http://www.w3.org/1998/Math/MathML'> <apply> <times/> <ci> default </ci> <apply> <ci> Function_for_vD_ICDHP </ci> <ci> ICDHP </ci> <ci> default </ci> <ci> kdegr </ci> <ci> mu </ci> </apply> </apply> </math> </kineticLaw> </reaction> <reaction fast='false' id='vD_ICIT' metaid='metaid_519' name='vD_ICIT' reversible='true'> <listOfReactants> <speciesReference constant='true' metaid='metaid_518' species='ICIT' stoichiometry='1'/> </listOfReactants> <kineticLaw> <math xmlns='http://www.w3.org/1998/Math/MathML'> <apply> <times/> <ci> default </ci> <apply> <ci> Function_for_vD_ICIT </ci> <ci> ICIT </ci> <ci> default </ci> <ci> mu </ci> </apply> </apply> </math> </kineticLaw> </reaction> <reaction fast='false' id='vD_Icl' metaid='metaid_521' name='vD_Icl' reversible='true'> <listOfReactants> <speciesReference constant='true' metaid='metaid_520' species='Icl' stoichiometry='1'/> </listOfReactants> <kineticLaw> <math xmlns='http://www.w3.org/1998/Math/MathML'> <apply> <times/> <ci> default </ci> <apply> <ci> Function_for_vD_Icl </ci> <ci> Icl </ci> <ci> default </ci> <ci> kdegr </ci> <ci> mu </ci> </apply> </apply> </math> </kineticLaw> </reaction> <reaction fast='false' id='vD_KDPG' metaid='metaid_523' name='vD_KDPG' reversible='true'> <listOfReactants> <speciesReference constant='true' metaid='metaid_522' species='KDPG' stoichiometry='1'/> </listOfReactants> <kineticLaw> <math xmlns='http://www.w3.org/1998/Math/MathML'> <apply> <times/> <ci> default </ci> <apply> <ci> Function_for_vD_KDPG </ci> <ci> KDPG </ci> <ci> default </ci> <ci> mu </ci> </apply> </apply> </math> </kineticLaw> </reaction> <reaction fast='false' id='vD_MAL' metaid='metaid_525' name='vD_MAL' reversible='true'> <listOfReactants> <speciesReference constant='true' metaid='metaid_524' species='MAL' stoichiometry='1'/> </listOfReactants> <kineticLaw> <math xmlns='http://www.w3.org/1998/Math/MathML'> <apply> <times/> <ci> default </ci> <apply> <ci> Function_for_vD_MAL </ci> <ci> MAL </ci> <ci> default </ci> <ci> mu </ci> </apply> </apply> </math> </kineticLaw> </reaction> <reaction fast='false' id='vD_MDH' metaid='metaid_527' name='vD_MDH' reversible='true'> <annotation> <COPASI xmlns='http://www.copasi.org/static/sbml'> <rdf:RDF xmlns:dcterms='http://purl.org/dc/terms/' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#'> <rdf:Description rdf:about='#metaid_527'> <dcterms:created> <rdf:Description> <dcterms:W3CDTF>2015-12-30T21:03:25Z</dcterms:W3CDTF> </rdf:Description> </dcterms:created> </rdf:Description> </rdf:RDF> </COPASI> </annotation> <listOfReactants> <speciesReference constant='true' metaid='metaid_526' species='MDH' stoichiometry='1'/> </listOfReactants> <kineticLaw> <math xmlns='http://www.w3.org/1998/Math/MathML'> <apply> <times/> <ci> default </ci> <apply> <ci> Function_for_vD_MDH </ci> <ci> MDH </ci> <ci> default </ci> <ci> kdegr </ci> <ci> mu </ci> </apply> </apply> </math> </kineticLaw> </reaction> <reaction fast='false' id='vD_MS' metaid='metaid_529' name='vD_MS' reversible='true'> <annotation> <COPASI xmlns='http://www.copasi.org/static/sbml'> <rdf:RDF xmlns:dcterms='http://purl.org/dc/terms/' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#'> <rdf:Description rdf:about='#metaid_529'> <dcterms:created> <rdf:Description> <dcterms:W3CDTF>2015-12-30T20:33:01Z</dcterms:W3CDTF> </rdf:Description> </dcterms:created> </rdf:Description> </rdf:RDF> </COPASI> </annotation> <listOfReactants> <speciesReference constant='true' metaid='metaid_528' species='MS' stoichiometry='1'/> </listOfReactants> <kineticLaw> <math xmlns='http://www.w3.org/1998/Math/MathML'> <apply> <times/> <ci> default </ci> <apply> <ci> Function_for_vD_MS </ci> <ci> MS </ci> <ci> default </ci> <ci> kdegr </ci> <ci> mu </ci> </apply> </apply> </math> </kineticLaw> </reaction> <reaction fast='false' id='vD_Mez' metaid='metaid_531' name='vD_Mez' reversible='true'> <annotation> <COPASI xmlns='http://www.copasi.org/static/sbml'> <rdf:RDF xmlns:dcterms='http://purl.org/dc/terms/' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#'> <rdf:Description rdf:about='#metaid_531'> <dcterms:created> <rdf:Description> <dcterms:W3CDTF>2015-12-30T20:33:02Z</dcterms:W3CDTF> </rdf:Description> </dcterms:created> </rdf:Description> </rdf:RDF> </COPASI> </annotation> <listOfReactants> <speciesReference constant='true' metaid='metaid_530' species='Mez' stoichiometry='1'/> </listOfReactants> <kineticLaw> <math xmlns='http://www.w3.org/1998/Math/MathML'> <apply> <times/> <ci> default </ci> <apply> <ci> Function_for_vD_Mez </ci> <ci> Mez </ci> <ci> default </ci> <ci> kdegr </ci> <ci> mu </ci> </apply> </apply> </math> </kineticLaw> </reaction> <reaction fast='false' id='vD_OAA' metaid='metaid_533' name='vD_OAA' reversible='true'> <annotation> <COPASI xmlns='http://www.copasi.org/static/sbml'> <rdf:RDF xmlns:dcterms='http://purl.org/dc/terms/' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#'> <rdf:Description rdf:about='#metaid_533'> <dcterms:created> <rdf:Description> <dcterms:W3CDTF>2015-12-30T20:33:01Z</dcterms:W3CDTF> </rdf:Description> </dcterms:created> </rdf:Description> </rdf:RDF> </COPASI> </annotation> <listOfReactants> <speciesReference constant='true' metaid='metaid_532' species='OAA' stoichiometry='1'/> </listOfReactants> <kineticLaw> <math xmlns='http://www.w3.org/1998/Math/MathML'> <apply> <times/> <ci> default </ci> <apply> <ci> Function_for_vD_OAA </ci> <ci> OAA </ci> <ci> default </ci> <ci> mu </ci> </apply> </apply> </math> </kineticLaw> </reaction> <reaction fast='false' id='vD_PDH' metaid='metaid_535' name='vD_PDH' reversible='true'> <annotation> <COPASI xmlns='http://www.copasi.org/static/sbml'> <rdf:RDF xmlns:dcterms='http://purl.org/dc/terms/' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#'> <rdf:Description rdf:about='#metaid_535'> <dcterms:created> <rdf:Description> <dcterms:W3CDTF>2015-12-30T20:33:00Z</dcterms:W3CDTF> </rdf:Description> </dcterms:created> </rdf:Description> </rdf:RDF> </COPASI> </annotation> <listOfReactants> <speciesReference constant='true' metaid='metaid_534' species='PDH' stoichiometry='1'/> </listOfReactants> <kineticLaw> <math xmlns='http://www.w3.org/1998/Math/MathML'> <apply> <times/> <ci> default </ci> <apply> <ci> Function_for_vD_PDH </ci> <ci> PDH </ci> <ci> default </ci> <ci> kdegr </ci> <ci> mu </ci> </apply> </apply> </math> </kineticLaw> </reaction> <reaction fast='false' id='vD_PEP' metaid='metaid_537' name='vD_PEP' reversible='true'> <annotation> <COPASI xmlns='http://www.copasi.org/static/sbml'> <rdf:RDF xmlns:dcterms='http://purl.org/dc/terms/' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#'> <rdf:Description rdf:about='#metaid_537'> <dcterms:created> <rdf:Description> <dcterms:W3CDTF>2015-12-30T20:32:59Z</dcterms:W3CDTF> </rdf:Description> </dcterms:created> </rdf:Description> </rdf:RDF> </COPASI> </annotation> <listOfReactants> <speciesReference constant='true' metaid='metaid_536' species='PEP' stoichiometry='1'/> </listOfReactants> <kineticLaw> <math xmlns='http://www.w3.org/1998/Math/MathML'> <apply> <times/> <ci> default </ci> <apply> <ci> Function_for_vD_PEP </ci> <ci> PEP </ci> <ci> default </ci> <ci> mu </ci> </apply> </apply> </math> </kineticLaw> </reaction> <reaction fast='false' id='vD_PYR' metaid='metaid_539' name='vD_PYR' reversible='true'> <annotation> <COPASI xmlns='http://www.copasi.org/static/sbml'> <rdf:RDF xmlns:dcterms='http://purl.org/dc/terms/' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#'> <rdf:Description rdf:about='#metaid_539'> <dcterms:created> <rdf:Description> <dcterms:W3CDTF>2015-12-30T20:32:57Z</dcterms:W3CDTF> </rdf:Description> </dcterms:created> </rdf:Description> </rdf:RDF> </COPASI> </annotation> <listOfReactants> <speciesReference constant='true' metaid='metaid_538' species='PYR' stoichiometry='1'/> </listOfReactants> <kineticLaw> <math xmlns='http://www.w3.org/1998/Math/MathML'> <apply> <times/> <ci> default </ci> <apply> <ci> Function_for_vD_PYR </ci> <ci> PYR </ci> <ci> default </ci> <ci> mu </ci> </apply> </apply> </math> </kineticLaw> </reaction> <reaction fast='false' id='vD_Pck' metaid='metaid_541' name='vD_Pck' reversible='true'> <annotation> <COPASI xmlns='http://www.copasi.org/static/sbml'> <rdf:RDF xmlns:dcterms='http://purl.org/dc/terms/' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#'> <rdf:Description rdf:about='#metaid_541'> <dcterms:created> <rdf:Description> <dcterms:W3CDTF>2015-12-30T20:33:00Z</dcterms:W3CDTF> </rdf:Description> </dcterms:created> </rdf:Description> </rdf:RDF> </COPASI> </annotation> <listOfReactants> <speciesReference constant='true' metaid='metaid_540' species='Pck' stoichiometry='1'/> </listOfReactants> <kineticLaw> <math xmlns='http://www.w3.org/1998/Math/MathML'> <apply> <times/> <ci> default </ci> <apply> <ci> Function_for_vD_Pck </ci> <ci> Pck </ci> <ci> default </ci> <ci> kdegr </ci> <ci> mu </ci> </apply> </apply> </math> </kineticLaw> </reaction> <reaction fast='false' id='vD_Pfk' metaid='metaid_543' name='vD_Pfk' reversible='true'> <annotation> <COPASI xmlns='http://www.copasi.org/static/sbml'> <rdf:RDF xmlns:dcterms='http://purl.org/dc/terms/' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#'> <rdf:Description rdf:about='#metaid_543'> <dcterms:created> <rdf:Description> <dcterms:W3CDTF>2015-12-30T20:32:59Z</dcterms:W3CDTF> </rdf:Description> </dcterms:created> </rdf:Description> </rdf:RDF> </COPASI> </annotation> <listOfReactants> <speciesReference constant='true' metaid='metaid_542' species='Pfk' stoichiometry='1'/> </listOfReactants> <kineticLaw> <math xmlns='http://www.w3.org/1998/Math/MathML'> <apply> <times/> <ci> default </ci> <apply> <ci> Function_for_vD_Pfk </ci> <ci> Pfk </ci> <ci> default </ci> <ci> kdegr </ci> <ci> mu </ci> </apply> </apply> </math> </kineticLaw> </reaction> <reaction fast='false' id='vD_Ppc' metaid='metaid_545' name='vD_Ppc' reversible='true'> <annotation> <COPASI xmlns='http://www.copasi.org/static/sbml'> <rdf:RDF xmlns:dcterms='http://purl.org/dc/terms/' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#'> <rdf:Description rdf:about='#metaid_545'> <dcterms:created> <rdf:Description> <dcterms:W3CDTF>2015-12-30T20:32:58Z</dcterms:W3CDTF> </rdf:Description> </dcterms:created> </rdf:Description> </rdf:RDF> </COPASI> </annotation> <listOfReactants> <speciesReference constant='true' metaid='metaid_544' species='Ppc' stoichiometry='1'/> </listOfReactants> <kineticLaw> <math xmlns='http://www.w3.org/1998/Math/MathML'> <apply> <times/> <ci> default </ci> <apply> <ci> Function_for_vD_Ppc </ci> <ci> Ppc </ci> <ci> default </ci> <ci> kdegr </ci> <ci> mu </ci> </apply> </apply> </math> </kineticLaw> </reaction> <reaction fast='false' id='vD_Pps' metaid='metaid_547' name='vD_Pps' reversible='true'> <annotation> <COPASI xmlns='http://www.copasi.org/static/sbml'> <rdf:RDF xmlns:dcterms='http://purl.org/dc/terms/' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#'> <rdf:Description rdf:about='#metaid_547'> <dcterms:created> <rdf:Description> <dcterms:W3CDTF>2015-12-30T20:32:58Z</dcterms:W3CDTF> </rdf:Description> </dcterms:created> </rdf:Description> </rdf:RDF> </COPASI> </annotation> <listOfReactants> <speciesReference constant='true' metaid='metaid_546' species='Pps' stoichiometry='1'/> </listOfReactants> <kineticLaw> <math xmlns='http://www.w3.org/1998/Math/MathML'> <apply> <times/> <ci> default </ci> <apply> <ci> Function_for_vD_Pps </ci> <ci> Pps </ci> <ci> default </ci> <ci> kdegr </ci> <ci> mu </ci> </apply> </apply> </math> </kineticLaw> </reaction> <reaction fast='false' id='vD_Pyk' metaid='metaid_549' name='vD_Pyk' reversible='true'> <annotation> <COPASI xmlns='http://www.copasi.org/static/sbml'> <rdf:RDF xmlns:dcterms='http://purl.org/dc/terms/' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#'> <rdf:Description rdf:about='#metaid_549'> <dcterms:created> <rdf:Description> <dcterms:W3CDTF>2015-12-30T20:32:57Z</dcterms:W3CDTF> </rdf:Description> </dcterms:created> </rdf:Description> </rdf:RDF> </COPASI> </annotation> <listOfReactants> <speciesReference constant='true' metaid='metaid_548' species='Pyk' stoichiometry='1'/> </listOfReactants> <kineticLaw> <math xmlns='http://www.w3.org/1998/Math/MathML'> <apply> <times/> <ci> default </ci> <apply> <ci> Function_for_vD_Pyk </ci> <ci> Pyk </ci> <ci> default </ci> <ci> kdegr </ci> <ci> mu </ci> </apply> </apply> </math> </kineticLaw> </reaction> <reaction fast='false' id='vD_R5P' metaid='metaid_551' name='vD_R5P' reversible='true'> <annotation> <COPASI xmlns='http://www.copasi.org/static/sbml'> <rdf:RDF xmlns:dcterms='http://purl.org/dc/terms/' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#'> <rdf:Description rdf:about='#metaid_551'> <dcterms:created> <rdf:Description> <dcterms:W3CDTF>2015-12-30T20:32:56Z</dcterms:W3CDTF> </rdf:Description> </dcterms:created> </rdf:Description> </rdf:RDF> </COPASI> </annotation> <listOfReactants> <speciesReference constant='true' metaid='metaid_550' species='R5P' stoichiometry='1'/> </listOfReactants> <kineticLaw> <math xmlns='http://www.w3.org/1998/Math/MathML'> <apply> <times/> <ci> default </ci> <apply> <ci> Function_for_vD_R5P </ci> <ci> R5P </ci> <ci> default </ci> <ci> mu </ci> </apply> </apply> </math> </kineticLaw> </reaction> <reaction fast='false' id='vD_RU5P' metaid='metaid_553' name='vD_RU5P' reversible='true'> <annotation> <COPASI xmlns='http://www.copasi.org/static/sbml'> <rdf:RDF xmlns:dcterms='http://purl.org/dc/terms/' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#'> <rdf:Description rdf:about='#metaid_553'> <dcterms:created> <rdf:Description> <dcterms:W3CDTF>2015-12-30T20:32:56Z</dcterms:W3CDTF> </rdf:Description> </dcterms:created> </rdf:Description> </rdf:RDF> </COPASI> </annotation> <listOfReactants> <speciesReference constant='true' metaid='metaid_552' species='RU5P' stoichiometry='1'/> </listOfReactants> <kineticLaw> <math xmlns='http://www.w3.org/1998/Math/MathML'> <apply> <times/> <ci> default </ci> <apply> <ci> Function_for_vD_RU5P </ci> <ci> RU5P </ci> <ci> default </ci> <ci> mu </ci> </apply> </apply> </math> </kineticLaw> </reaction> <reaction fast='false' id='vD_S7P' metaid='metaid_555' name='vD_S7P' reversible='true'> <annotation> <COPASI xmlns='http://www.copasi.org/static/sbml'> <rdf:RDF xmlns:dcterms='http://purl.org/dc/terms/' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#'> <rdf:Description rdf:about='#metaid_555'> <dcterms:created> <rdf:Description> <dcterms:W3CDTF>2015-12-30T20:32:55Z</dcterms:W3CDTF> </rdf:Description> </dcterms:created> </rdf:Description> </rdf:RDF> </COPASI> </annotation> <listOfReactants> <speciesReference constant='true' metaid='metaid_554' species='S7P' stoichiometry='1'/> </listOfReactants> <kineticLaw> <math xmlns='http://www.w3.org/1998/Math/MathML'> <apply> <times/> <ci> default </ci> <apply> <ci> Function_for_vD_S7P </ci> <ci> S7P </ci> <ci> default </ci> <ci> mu </ci> </apply> </apply> </math> </kineticLaw> </reaction> <reaction fast='false' id='vD_SDH' metaid='metaid_557' name='vD_SDH' reversible='true'> <annotation> <COPASI xmlns='http://www.copasi.org/static/sbml'> <rdf:RDF xmlns:dcterms='http://purl.org/dc/terms/' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#'> <rdf:Description rdf:about='#metaid_557'> <dcterms:created> <rdf:Description> <dcterms:W3CDTF>2015-12-30T20:32:55Z</dcterms:W3CDTF> </rdf:Description> </dcterms:created> </rdf:Description> </rdf:RDF> </COPASI> </annotation> <listOfReactants> <speciesReference constant='true' metaid='metaid_556' species='SDH' stoichiometry='1'/> </listOfReactants> <kineticLaw> <math xmlns='http://www.w3.org/1998/Math/MathML'> <apply> <times/> <ci> default </ci> <apply> <ci> Function_for_vD_SDH </ci> <ci> SDH </ci> <ci> default </ci> <ci> kdegr </ci> <ci> mu </ci> </apply> </apply> </math> </kineticLaw> </reaction> <reaction fast='false' id='vD_SUC' metaid='metaid_559' name='vD_SUC' reversible='true'> <listOfReactants> <speciesReference constant='true' metaid='metaid_558' species='SUC' stoichiometry='1'/> </listOfReactants> <kineticLaw> <math xmlns='http://www.w3.org/1998/Math/MathML'> <apply> <times/> <ci> default </ci> <apply> <ci> Function_for_vD_SUC </ci> <ci> SUC </ci> <ci> default </ci> <ci> mu </ci> </apply> </apply> </math> </kineticLaw> </reaction> <reaction fast='false' id='vD_X' metaid='metaid_561' name='vD_X' reversible='true'> <annotation> <COPASI xmlns='http://www.copasi.org/static/sbml'> <rdf:RDF xmlns:dcterms='http://purl.org/dc/terms/' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#'> <rdf:Description rdf:about='#metaid_561'> <dcterms:created> <rdf:Description> <dcterms:W3CDTF>2015-12-30T20:32:54Z</dcterms:W3CDTF> </rdf:Description> </dcterms:created> </rdf:Description> </rdf:RDF> </COPASI> </annotation> <listOfReactants> <speciesReference constant='true' metaid='metaid_560' species='X' stoichiometry='1'/> </listOfReactants> <kineticLaw> <math xmlns='http://www.w3.org/1998/Math/MathML'> <apply> <times/> <ci> default </ci> <apply> <ci> Function_for_vD_X </ci> <ci> D </ci> <ci> X </ci> <ci> default </ci> </apply> </apply> </math> </kineticLaw> </reaction> <reaction fast='false' id='vD_X5P' metaid='metaid_563' name='vD_X5P' reversible='true'> <annotation> <COPASI xmlns='http://www.copasi.org/static/sbml'> <rdf:RDF xmlns:dcterms='http://purl.org/dc/terms/' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#'> <rdf:Description rdf:about='#metaid_563'> <dcterms:created> <rdf:Description> <dcterms:W3CDTF>2015-12-30T20:32:54Z</dcterms:W3CDTF> </rdf:Description> </dcterms:created> </rdf:Description> </rdf:RDF> </COPASI> </annotation> <listOfReactants> <speciesReference constant='true' metaid='metaid_562' species='X5P' stoichiometry='1'/> </listOfReactants> <kineticLaw> <math xmlns='http://www.w3.org/1998/Math/MathML'> <apply> <times/> <ci> default </ci> <apply> <ci> Function_for_vD_X5P </ci> <ci> X5P </ci> <ci> default </ci> <ci> mu </ci> </apply> </apply> </math> </kineticLaw> </reaction> <reaction fast='false' id='vD_aKG' metaid='metaid_565' name='vD_aKG' reversible='true'> <listOfReactants> <speciesReference constant='true' metaid='metaid_564' species='aKG' stoichiometry='1'/> </listOfReactants> <kineticLaw> <math xmlns='http://www.w3.org/1998/Math/MathML'> <apply> <times/> <ci> default </ci> <apply> <ci> Function_for_vD_aKG </ci> <ci> aKG </ci> <ci> default </ci> <ci> mu </ci> </apply> </apply> </math> </kineticLaw> </reaction> <reaction fast='false' id='vD_aKGDH' metaid='metaid_567' name='vD_aKGDH' reversible='true'> <annotation> <COPASI xmlns='http://www.copasi.org/static/sbml'> <rdf:RDF xmlns:dcterms='http://purl.org/dc/terms/' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#'> <rdf:Description rdf:about='#metaid_567'> <dcterms:created> <rdf:Description> <dcterms:W3CDTF>2015-12-30T21:00:32Z</dcterms:W3CDTF> </rdf:Description> </dcterms:created> </rdf:Description> </rdf:RDF> </COPASI> </annotation> <listOfReactants> <speciesReference constant='true' metaid='metaid_566' species='aKGDH' stoichiometry='1'/> </listOfReactants> <kineticLaw> <math xmlns='http://www.w3.org/1998/Math/MathML'> <apply> <times/> <ci> default </ci> <apply> <ci> Function_for_vD_aKGDH </ci> <ci> aKGDH </ci> <ci> default </ci> <ci> kdegr </ci> <ci> mu </ci> </apply> </apply> </math> </kineticLaw> </reaction> <reaction fast='false' id='vD_cAMP' metaid='metaid_569' name='vD_cAMP' reversible='true'> <listOfReactants> <speciesReference constant='true' metaid='metaid_568' species='cAMP' stoichiometry='1'/> </listOfReactants> <kineticLaw> <math xmlns='http://www.w3.org/1998/Math/MathML'> <apply> <times/> <ci> default </ci> <apply> <ci> Function_for_vD_cAMP </ci> <ci> cAMP </ci> <ci> default </ci> <ci> mu </ci> </apply> </apply> </math> </kineticLaw> </reaction> <reaction fast='false' id='vE_6PGDH' metaid='metaid_572' name='vE_6PGDH' reversible='true'> <annotation> <COPASI xmlns='http://www.copasi.org/static/sbml'> <rdf:RDF xmlns:CopasiMT='http://www.copasi.org/RDF/MiriamTerms#' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#'> <rdf:Description rdf:about='#metaid_572'> <CopasiMT:is> <rdf:Bag> <rdf:li rdf:resource='http://identifiers.org/kegg.reaction/R01528'/> </rdf:Bag> </CopasiMT:is> </rdf:Description> </rdf:RDF> </COPASI> <rdf:RDF xmlns:bqbiol='http://biomodels.net/biology-qualifiers/' xmlns:bqmodel='http://biomodels.net/model-qualifiers/' xmlns:dc='http://purl.org/dc/elements/1.1/' xmlns:dcterms='http://purl.org/dc/terms/' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#' xmlns:vCard='http://www.w3.org/2001/vcard-rdf/3.0#'> <rdf:Description rdf:about='#metaid_572'> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource='http://identifiers.org/kegg.reaction/R01528'/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference constant='true' metaid='metaid_570' species='sixPG' stoichiometry='1'/> </listOfReactants> <listOfProducts> <speciesReference constant='true' metaid='metaid_571' species='RU5P' stoichiometry='1'/> </listOfProducts> <kineticLaw> <math xmlns='http://www.w3.org/1998/Math/MathML'> <apply> <times/> <ci> default </ci> <apply> <ci> Function_for_vE_6PGDH </ci> <ci> ATP </ci> <ci> K6PGDH_6PG </ci> <ci> K6PGDH_ATP_inh </ci> <ci> K6PGDH_NADP </ci> <ci> K6PGDH_NADPH_inh </ci> <ci> NADP </ci> <ci> NADPH </ci> <ci> default </ci> <ci> sixPG </ci> <ci> v6PGDH_max </ci> </apply> </apply> </math> </kineticLaw> </reaction> <reaction fast='false' id='vE_AceKki' metaid='metaid_583' name='vE_AceKki' reversible='true'> <annotation> <COPASI xmlns='http://www.copasi.org/static/sbml'> <rdf:RDF xmlns:CopasiMT='http://www.copasi.org/RDF/MiriamTerms#' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#'> <rdf:Description rdf:about='#metaid_583'> <CopasiMT:is> <rdf:Bag> <rdf:li rdf:resource='http://identifiers.org/kegg.reaction/R04401'/> </rdf:Bag> </CopasiMT:is> </rdf:Description> </rdf:RDF> </COPASI> <rdf:RDF xmlns:bqbiol='http://biomodels.net/biology-qualifiers/' xmlns:bqmodel='http://biomodels.net/model-qualifiers/' xmlns:dc='http://purl.org/dc/elements/1.1/' xmlns:dcterms='http://purl.org/dc/terms/' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#' xmlns:vCard='http://www.w3.org/2001/vcard-rdf/3.0#'> <rdf:Description rdf:about='#metaid_583'> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource='http://identifiers.org/kegg.reaction/R04401'/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference constant='true' metaid='metaid_573' species='ICDH' stoichiometry='1'/> </listOfReactants> <listOfProducts> <speciesReference constant='true' metaid='metaid_574' species='ICDHP' stoichiometry='1'/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference metaid='metaid_575' species='PYR'/> <modifierSpeciesReference metaid='metaid_576' species='aKG'/> <modifierSpeciesReference metaid='metaid_577' species='GOX'/> <modifierSpeciesReference metaid='metaid_578' species='ICIT'/> <modifierSpeciesReference metaid='metaid_579' species='GAP'/> <modifierSpeciesReference metaid='metaid_580' species='PEP'/> <modifierSpeciesReference metaid='metaid_581' species='OAA'/> <modifierSpeciesReference metaid='metaid_582' species='AceK'/> </listOfModifiers> <kineticLaw> <math xmlns='http://www.w3.org/1998/Math/MathML'> <apply> <times/> <ci> default </ci> <apply> <ci> Function_for_vE_AceKki </ci> <ci> AceK </ci> <ci> GAP </ci> <ci> GOX </ci> <ci> ICDH </ci> <ci> ICIT </ci> <ci> KAceK_3PG </ci> <ci> KAceK_GOX </ci> <ci> KAceK_ICDH </ci> <ci> KAceK_ICIT </ci> <ci> KAceK_OAA </ci> <ci> KAceK_PEP </ci> <ci> KAceK_PYR </ci> <ci> KAceK_aKG </ci> <ci> LAceK </ci> <ci> OAA </ci> <ci> PEP </ci> <ci> PYR </ci> <ci> aKG </ci> <ci> default </ci> <ci> kAceKki_cat </ci> <ci> nAceK </ci> </apply> </apply> </math> </kineticLaw> </reaction> <reaction fast='false' id='vE_AceKph' metaid='metaid_592' name='vE_AceKph' reversible='true'> <annotation> <COPASI xmlns='http://www.copasi.org/static/sbml'> <rdf:RDF xmlns:CopasiMT='http://www.copasi.org/RDF/MiriamTerms#' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#'> <rdf:Description rdf:about='#metaid_592'> <CopasiMT:is> <rdf:Bag> <rdf:li rdf:resource='http://identifiers.org/kegg.reaction/R04401'/> </rdf:Bag> </CopasiMT:is> </rdf:Description> </rdf:RDF> </COPASI> <rdf:RDF xmlns:bqbiol='http://biomodels.net/biology-qualifiers/' xmlns:bqmodel='http://biomodels.net/model-qualifiers/' xmlns:dc='http://purl.org/dc/elements/1.1/' xmlns:dcterms='http://purl.org/dc/terms/' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#' xmlns:vCard='http://www.w3.org/2001/vcard-rdf/3.0#'> <rdf:Description rdf:about='#metaid_592'> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource='http://identifiers.org/kegg.reaction/R04401'/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference constant='true' metaid='metaid_584' species='ICDHP' stoichiometry='1'/> </listOfReactants> <listOfProducts> <speciesReference constant='true' metaid='metaid_585' species='ICDH' stoichiometry='1'/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference metaid='metaid_586' species='aKG'/> <modifierSpeciesReference metaid='metaid_587' species='GAP'/> <modifierSpeciesReference metaid='metaid_588' species='PEP'/> <modifierSpeciesReference metaid='metaid_589' species='PYR'/> <modifierSpeciesReference metaid='metaid_590' species='OAA'/> <modifierSpeciesReference metaid='metaid_591' species='AceK'/> </listOfModifiers> <kineticLaw> <math xmlns='http://www.w3.org/1998/Math/MathML'> <apply> <times/> <ci> default </ci> <apply> <ci> Function_for_vE_AceKph </ci> <ci> AceK </ci> <ci> GAP </ci> <ci> ICDHP </ci> <ci> KAceK_3PG </ci> <ci> KAceK_ICDHP </ci> <ci> KAceK_OAA </ci> <ci> KAceK_PEP </ci> <ci> KAceK_PYR </ci> <ci> KAceK_aKG </ci> <ci> LAceK </ci> <ci> OAA </ci> <ci> PEP </ci> <ci> PYR </ci> <ci> aKG </ci> <ci> default </ci> <ci> kAceKph_cat </ci> <ci> nAceK </ci> </apply> </apply> </math> </kineticLaw> </reaction> <reaction fast='false' id='vE_Ack' metaid='metaid_595' name='vE_Ack' reversible='true'> <annotation> <COPASI xmlns='http://www.copasi.org/static/sbml'> <rdf:RDF xmlns:CopasiMT='http://www.copasi.org/RDF/MiriamTerms#' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#'> <rdf:Description rdf:about='#metaid_595'> <CopasiMT:is> <rdf:Bag> <rdf:li rdf:resource='http://identifiers.org/kegg.reaction/R00315'/> </rdf:Bag> </CopasiMT:is> </rdf:Description> </rdf:RDF> </COPASI> <rdf:RDF xmlns:bqbiol='http://biomodels.net/biology-qualifiers/' xmlns:bqmodel='http://biomodels.net/model-qualifiers/' xmlns:dc='http://purl.org/dc/elements/1.1/' xmlns:dcterms='http://purl.org/dc/terms/' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#' xmlns:vCard='http://www.w3.org/2001/vcard-rdf/3.0#'> <rdf:Description rdf:about='#metaid_595'> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource='http://identifiers.org/kegg.reaction/R00315'/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference constant='true' metaid='metaid_593' species='AcP' stoichiometry='1'/> </listOfReactants> <listOfModifiers> <modifierSpeciesReference metaid='metaid_594' species='ACEex'/> </listOfModifiers> <kineticLaw> <math xmlns='http://www.w3.org/1998/Math/MathML'> <apply> <times/> <ci> default </ci> <apply> <ci> Function_for_vE_Ack </ci> <ci> ACEex </ci> <ci> ADP </ci> <ci> ATP </ci> <ci> AcP </ci> <ci> KAck_ACE_m </ci> <ci> KAck_ADP_m </ci> <ci> KAck_ATP_m </ci> <ci> KAck_AcP_m </ci> <ci> KAck_eq </ci> <ci> default </ci> <ci> vAck_max </ci> </apply> </apply> </math> </kineticLaw> </reaction> <reaction fast='false' id='vE_Ack_medium' metaid='metaid_599' name='vE_Ack_medium' reversible='true'> <annotation> <COPASI xmlns='http://www.copasi.org/static/sbml'> <rdf:RDF xmlns:CopasiMT='http://www.copasi.org/RDF/MiriamTerms#' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#'> <rdf:Description rdf:about='#metaid_599'> <CopasiMT:is> <rdf:Bag> <rdf:li rdf:resource='http://identifiers.org/kegg.reaction/R00315'/> </rdf:Bag> </CopasiMT:is> </rdf:Description> </rdf:RDF> </COPASI> <rdf:RDF xmlns:bqbiol='http://biomodels.net/biology-qualifiers/' xmlns:bqmodel='http://biomodels.net/model-qualifiers/' xmlns:dc='http://purl.org/dc/elements/1.1/' xmlns:dcterms='http://purl.org/dc/terms/' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#' xmlns:vCard='http://www.w3.org/2001/vcard-rdf/3.0#'> <rdf:Description rdf:about='#metaid_599'> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource='http://identifiers.org/kegg.reaction/R00315'/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference constant='true' metaid='metaid_596' species='ACEex' stoichiometry='1'/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference metaid='metaid_597' species='X'/> <modifierSpeciesReference metaid='metaid_598' species='AcP'/> </listOfModifiers> <kineticLaw> <math xmlns='http://www.w3.org/1998/Math/MathML'> <apply> <times/> <ci> default </ci> <apply> <ci> Function_for_vE_Ack_medium </ci> <ci> ACEex </ci> <ci> ADP </ci> <ci> ATP </ci> <ci> AcP </ci> <ci> KAck_ACE_m </ci> <ci> KAck_ADP_m </ci> <ci> KAck_ATP_m </ci> <ci> KAck_AcP_m </ci> <ci> KAck_eq </ci> <ci> X </ci> <ci> default </ci> <ci> rho </ci> <ci> vAck_max </ci> </apply> </apply> </math> </kineticLaw> </reaction> <reaction fast='false' id='vE_Acs' metaid='metaid_603' name='vE_Acs' reversible='true'> <annotation> <COPASI xmlns='http://www.copasi.org/static/sbml'> <rdf:RDF xmlns:CopasiMT='http://www.copasi.org/RDF/MiriamTerms#' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#'> <rdf:Description rdf:about='#metaid_603'> <CopasiMT:is> <rdf:Bag> <rdf:li rdf:resource='http://identifiers.org/kegg.reaction/R00235'/> </rdf:Bag> </CopasiMT:is> </rdf:Description> </rdf:RDF> </COPASI> <rdf:RDF xmlns:bqbiol='http://biomodels.net/biology-qualifiers/' xmlns:bqmodel='http://biomodels.net/model-qualifiers/' xmlns:dc='http://purl.org/dc/elements/1.1/' xmlns:dcterms='http://purl.org/dc/terms/' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#' xmlns:vCard='http://www.w3.org/2001/vcard-rdf/3.0#'> <rdf:Description rdf:about='#metaid_603'> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource='http://identifiers.org/kegg.reaction/R00235'/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference constant='true' metaid='metaid_600' species='AcCoA' stoichiometry='1'/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference metaid='metaid_601' species='ACEex'/> <modifierSpeciesReference metaid='metaid_602' species='Acs'/> </listOfModifiers> <kineticLaw> <math xmlns='http://www.w3.org/1998/Math/MathML'> <apply> <times/> <ci> default </ci> <apply> <ci> Function_for_vE_Acs </ci> <ci> ACEex </ci> <ci> Acs </ci> <ci> KAcs_ACE </ci> <ci> default </ci> <ci> kAcs_cat </ci> </apply> </apply> </math> </kineticLaw> </reaction> <reaction fast='false' id='vE_Acs_medium' metaid='metaid_607' name='vE_Acs_medium' reversible='true'> <annotation> <COPASI xmlns='http://www.copasi.org/static/sbml'> <rdf:RDF xmlns:CopasiMT='http://www.copasi.org/RDF/MiriamTerms#' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#'> <rdf:Description rdf:about='#metaid_607'> <CopasiMT:is> <rdf:Bag> <rdf:li rdf:resource='http://identifiers.org/kegg.reaction/R00235'/> </rdf:Bag> </CopasiMT:is> </rdf:Description> </rdf:RDF> </COPASI> <rdf:RDF xmlns:bqbiol='http://biomodels.net/biology-qualifiers/' xmlns:bqmodel='http://biomodels.net/model-qualifiers/' xmlns:dc='http://purl.org/dc/elements/1.1/' xmlns:dcterms='http://purl.org/dc/terms/' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#' xmlns:vCard='http://www.w3.org/2001/vcard-rdf/3.0#'> <rdf:Description rdf:about='#metaid_607'> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource='http://identifiers.org/kegg.reaction/R00235'/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference constant='true' metaid='metaid_604' species='ACEex' stoichiometry='1'/> </listOfReactants> <listOfModifiers> <modifierSpeciesReference metaid='metaid_605' species='X'/> <modifierSpeciesReference metaid='metaid_606' species='Acs'/> </listOfModifiers> <kineticLaw> <math xmlns='http://www.w3.org/1998/Math/MathML'> <apply> <times/> <ci> default </ci> <apply> <ci> Function_for_vE_Acs_medium </ci> <ci> ACEex </ci> <ci> Acs </ci> <ci> KAcs_ACE </ci> <ci> X </ci> <ci> default </ci> <ci> kAcs_cat </ci> <ci> rho </ci> </apply> </apply> </math> </kineticLaw> </reaction> <reaction fast='false' id='vE_CS' metaid='metaid_613' name='vE_CS' reversible='true'> <annotation> <COPASI xmlns='http://www.copasi.org/static/sbml'> <rdf:RDF xmlns:CopasiMT='http://www.copasi.org/RDF/MiriamTerms#' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#'> <rdf:Description rdf:about='#metaid_613'> <CopasiMT:is> <rdf:Bag> <rdf:li rdf:resource='http://identifiers.org/kegg.reaction/R00351'/> </rdf:Bag> </CopasiMT:is> </rdf:Description> </rdf:RDF> </COPASI> <rdf:RDF xmlns:bqbiol='http://biomodels.net/biology-qualifiers/' xmlns:bqmodel='http://biomodels.net/model-qualifiers/' xmlns:dc='http://purl.org/dc/elements/1.1/' xmlns:dcterms='http://purl.org/dc/terms/' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#' xmlns:vCard='http://www.w3.org/2001/vcard-rdf/3.0#'> <rdf:Description rdf:about='#metaid_613'> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource='http://identifiers.org/kegg.reaction/R00351'/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference constant='true' metaid='metaid_608' species='OAA' stoichiometry='1'/> <speciesReference constant='true' metaid='metaid_609' species='AcCoA' stoichiometry='1'/> </listOfReactants> <listOfProducts> <speciesReference constant='true' metaid='metaid_610' species='ICIT' stoichiometry='1'/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference metaid='metaid_611' species='aKG'/> <modifierSpeciesReference metaid='metaid_612' species='CS'/> </listOfModifiers> <kineticLaw> <math xmlns='http://www.w3.org/1998/Math/MathML'> <apply> <times/> <ci> default </ci> <apply> <ci> Function_for_vE_CS </ci> <ci> AcCoA </ci> <ci> CS </ci> <ci> KCS_AcCoA </ci> <ci> KCS_OAA </ci> <ci> KCS_OAA_AcCoA </ci> <ci> KCS_aKG </ci> <ci> OAA </ci> <ci> aKG </ci> <ci> default </ci> <ci> kCS_cat </ci> </apply> </apply> </math> </kineticLaw> </reaction> <reaction fast='false' id='vE_Cya' metaid='metaid_616' name='vE_Cya' reversible='true'> <annotation> <COPASI xmlns='http://www.copasi.org/static/sbml'> <rdf:RDF xmlns:CopasiMT='http://www.copasi.org/RDF/MiriamTerms#' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#'> <rdf:Description rdf:about='#metaid_616'> <CopasiMT:is> <rdf:Bag> <rdf:li rdf:resource='http://identifiers.org/kegg.reaction/R00089'/> </rdf:Bag> </CopasiMT:is> </rdf:Description> </rdf:RDF> </COPASI> <rdf:RDF xmlns:bqbiol='http://biomodels.net/biology-qualifiers/' xmlns:bqmodel='http://biomodels.net/model-qualifiers/' xmlns:dc='http://purl.org/dc/elements/1.1/' xmlns:dcterms='http://purl.org/dc/terms/' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#' xmlns:vCard='http://www.w3.org/2001/vcard-rdf/3.0#'> <rdf:Description rdf:about='#metaid_616'> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource='http://identifiers.org/kegg.reaction/R00089'/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfProducts> <speciesReference constant='true' metaid='metaid_614' species='cAMP' stoichiometry='1'/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference metaid='metaid_615' species='EIIAP'/> </listOfModifiers> <kineticLaw> <math xmlns='http://www.w3.org/1998/Math/MathML'> <apply> <times/> <ci> default </ci> <apply> <ci> Function_for_vE_Cya </ci> <ci> EIIAP </ci> <ci> KCya_EIIAP </ci> <ci> default </ci> <ci> vCya_max </ci> </apply> </apply> </math> </kineticLaw> </reaction> <reaction fast='false' id='vE_Eda' metaid='metaid_620' name='vE_Eda' reversible='true'> <annotation> <COPASI xmlns='http://www.copasi.org/static/sbml'> <rdf:RDF xmlns:CopasiMT='http://www.copasi.org/RDF/MiriamTerms#' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#'> <rdf:Description rdf:about='#metaid_620'> <CopasiMT:is> <rdf:Bag> <rdf:li rdf:resource='http://identifiers.org/kegg.reaction/R05605'/> </rdf:Bag> </CopasiMT:is> </rdf:Description> </rdf:RDF> </COPASI> <rdf:RDF xmlns:bqbiol='http://biomodels.net/biology-qualifiers/' xmlns:bqmodel='http://biomodels.net/model-qualifiers/' xmlns:dc='http://purl.org/dc/elements/1.1/' xmlns:dcterms='http://purl.org/dc/terms/' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#' xmlns:vCard='http://www.w3.org/2001/vcard-rdf/3.0#'> <rdf:Description rdf:about='#metaid_620'> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource='http://identifiers.org/kegg.reaction/R05605'/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference constant='true' metaid='metaid_617' species='KDPG' stoichiometry='1'/> </listOfReactants> <listOfProducts> <speciesReference constant='true' metaid='metaid_618' species='PYR' stoichiometry='1'/> <speciesReference constant='true' metaid='metaid_619' species='GAP' stoichiometry='1'/> </listOfProducts> <kineticLaw> <math xmlns='http://www.w3.org/1998/Math/MathML'> <apply> <times/> <ci> default </ci> <apply> <ci> Function_for_vE_Eda </ci> <ci> GAP </ci> <ci> KDPG </ci> <ci> KEda_GAP_m </ci> <ci> KEda_KDPG_m </ci> <ci> KEda_PYR_m </ci> <ci> KEda_eq </ci> <ci> PYR </ci> <ci> QEda_pH </ci> <ci> default </ci> <ci> vEda_max </ci> </apply> </apply> </math> </kineticLaw> </reaction> <reaction fast='false' id='vE_Edd' metaid='metaid_623' name='vE_Edd' reversible='true'> <annotation> <COPASI xmlns='http://www.copasi.org/static/sbml'> <rdf:RDF xmlns:CopasiMT='http://www.copasi.org/RDF/MiriamTerms#' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#'> <rdf:Description rdf:about='#metaid_623'> <CopasiMT:is> <rdf:Bag> <rdf:li rdf:resource='http://identifiers.org/kegg.reaction/R02036'/> </rdf:Bag> </CopasiMT:is> </rdf:Description> </rdf:RDF> </COPASI> <rdf:RDF xmlns:bqbiol='http://biomodels.net/biology-qualifiers/' xmlns:bqmodel='http://biomodels.net/model-qualifiers/' xmlns:dc='http://purl.org/dc/elements/1.1/' xmlns:dcterms='http://purl.org/dc/terms/' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#' xmlns:vCard='http://www.w3.org/2001/vcard-rdf/3.0#'> <rdf:Description rdf:about='#metaid_623'> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource='http://identifiers.org/kegg.reaction/R02036'/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference constant='true' metaid='metaid_621' species='sixPG' stoichiometry='1'/> </listOfReactants> <listOfProducts> <speciesReference constant='true' metaid='metaid_622' species='KDPG' stoichiometry='1'/> </listOfProducts> <kineticLaw> <math xmlns='http://www.w3.org/1998/Math/MathML'> <apply> <times/> <ci> default </ci> <apply> <ci> Function_for_vE_Edd </ci> <ci> KDPG </ci> <ci> KEdd_6PG_m </ci> <ci> KEdd_KDPG_m </ci> <ci> KEdd_eq </ci> <ci> QEdd_pH </ci> <ci> default </ci> <ci> sixPG </ci> <ci> vEdd_max </ci> </apply> </apply> </math> </kineticLaw> </reaction> <reaction fast='false' id='vE_Fba' metaid='metaid_627' name='vE_Fba' reversible='true'> <annotation> <COPASI xmlns='http://www.copasi.org/static/sbml'> <rdf:RDF xmlns:CopasiMT='http://www.copasi.org/RDF/MiriamTerms#' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#'> <rdf:Description rdf:about='#metaid_627'> <CopasiMT:is> <rdf:Bag> <rdf:li rdf:resource='http://identifiers.org/kegg.reaction/R01068'/> </rdf:Bag> </CopasiMT:is> </rdf:Description> </rdf:RDF> </COPASI> <rdf:RDF xmlns:bqbiol='http://biomodels.net/biology-qualifiers/' xmlns:bqmodel='http://biomodels.net/model-qualifiers/' xmlns:dc='http://purl.org/dc/elements/1.1/' xmlns:dcterms='http://purl.org/dc/terms/' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#' xmlns:vCard='http://www.w3.org/2001/vcard-rdf/3.0#'> <rdf:Description rdf:about='#metaid_627'> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource='http://identifiers.org/kegg.reaction/R01068'/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference constant='true' metaid='metaid_624' species='FBP' stoichiometry='1'/> </listOfReactants> <listOfProducts> <speciesReference constant='true' metaid='metaid_625' species='GAP' stoichiometry='2'/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference metaid='metaid_626' species='Fba'/> </listOfModifiers> <kineticLaw> <math xmlns='http://www.w3.org/1998/Math/MathML'> <apply> <times/> <ci> default </ci> <apply> <ci> Function_for_vE_Fba </ci> <ci> FBP </ci> <ci> Fba </ci> <ci> GAP </ci> <ci> KFba_DHAP </ci> <ci> KFba_FBP </ci> <ci> KFba_GAP </ci> <ci> KFba_GAP_inh </ci> <ci> KFba_eq </ci> <ci> VFba_blf </ci> <ci> default </ci> <ci> kFba_cat </ci> </apply> </apply> </math> </kineticLaw> </reaction> <reaction fast='false' id='vE_Fbp' metaid='metaid_632' name='vE_Fbp' reversible='true'> <annotation> <COPASI xmlns='http://www.copasi.org/static/sbml'> <rdf:RDF xmlns:CopasiMT='http://www.copasi.org/RDF/MiriamTerms#' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#'> <rdf:Description rdf:about='#metaid_632'> <CopasiMT:is> <rdf:Bag> <rdf:li rdf:resource='http://identifiers.org/kegg.reaction/R00762'/> </rdf:Bag> </CopasiMT:is> </rdf:Description> </rdf:RDF> </COPASI> <rdf:RDF xmlns:bqbiol='http://biomodels.net/biology-qualifiers/' xmlns:bqmodel='http://biomodels.net/model-qualifiers/' xmlns:dc='http://purl.org/dc/elements/1.1/' xmlns:dcterms='http://purl.org/dc/terms/' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#' xmlns:vCard='http://www.w3.org/2001/vcard-rdf/3.0#'> <rdf:Description rdf:about='#metaid_632'> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource='http://identifiers.org/kegg.reaction/R00762'/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference constant='true' metaid='metaid_628' species='FBP' stoichiometry='1'/> </listOfReactants> <listOfProducts> <speciesReference constant='true' metaid='metaid_629' species='F6P' stoichiometry='1'/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference metaid='metaid_630' species='PEP'/> <modifierSpeciesReference metaid='metaid_631' species='Fbp'/> </listOfModifiers> <kineticLaw> <math xmlns='http://www.w3.org/1998/Math/MathML'> <apply> <times/> <ci> default </ci> <apply> <ci> Function_for_vE_Fbp </ci> <ci> FBP </ci> <ci> Fbp </ci> <ci> KFbp_FBP </ci> <ci> KFbp_PEP </ci> <ci> LFbp </ci> <ci> PEP </ci> <ci> default </ci> <ci> kFbp_cat </ci> <ci> nFbp </ci> </apply> </apply> </math> </kineticLaw> </reaction> <reaction fast='false' id='vE_Fum' metaid='metaid_635' name='vE_Fum' reversible='true'> <annotation> <COPASI xmlns='http://www.copasi.org/static/sbml'> <rdf:RDF xmlns:CopasiMT='http://www.copasi.org/RDF/MiriamTerms#' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#'> <rdf:Description rdf:about='#metaid_635'> <CopasiMT:is> <rdf:Bag> <rdf:li rdf:resource='http://identifiers.org/kegg.reaction/R01082'/> </rdf:Bag> </CopasiMT:is> </rdf:Description> </rdf:RDF> </COPASI> <rdf:RDF xmlns:bqbiol='http://biomodels.net/biology-qualifiers/' xmlns:bqmodel='http://biomodels.net/model-qualifiers/' xmlns:dc='http://purl.org/dc/elements/1.1/' xmlns:dcterms='http://purl.org/dc/terms/' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#' xmlns:vCard='http://www.w3.org/2001/vcard-rdf/3.0#'> <rdf:Description rdf:about='#metaid_635'> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource='http://identifiers.org/kegg.reaction/R01082'/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference constant='true' metaid='metaid_633' species='FUM' stoichiometry='1'/> </listOfReactants> <listOfProducts> <speciesReference constant='true' metaid='metaid_634' species='MAL' stoichiometry='1'/> </listOfProducts> <kineticLaw> <math xmlns='http://www.w3.org/1998/Math/MathML'> <apply> <times/> <ci> default </ci> <apply> <ci> Function_for_vE_Fum </ci> <ci> FUM </ci> <ci> KFum_FUM_m </ci> <ci> KFum_eq </ci> <ci> MAL </ci> <ci> default </ci> <ci> vFum1_max </ci> <ci> vFum2_max </ci> </apply> </apply> </math> </kineticLaw> </reaction> <reaction fast='false' id='vE_G6PDH' metaid='metaid_638' name='vE_G6PDH' reversible='true'> <annotation> <COPASI xmlns='http://www.copasi.org/static/sbml'> <rdf:RDF xmlns:CopasiMT='http://www.copasi.org/RDF/MiriamTerms#' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#'> <rdf:Description rdf:about='#metaid_638'> <CopasiMT:is> <rdf:Bag> <rdf:li rdf:resource='http://identifiers.org/kegg.reaction/R00835'/> </rdf:Bag> </CopasiMT:is> </rdf:Description> </rdf:RDF> </COPASI> <rdf:RDF xmlns:bqbiol='http://biomodels.net/biology-qualifiers/' xmlns:bqmodel='http://biomodels.net/model-qualifiers/' xmlns:dc='http://purl.org/dc/elements/1.1/' xmlns:dcterms='http://purl.org/dc/terms/' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#' xmlns:vCard='http://www.w3.org/2001/vcard-rdf/3.0#'> <rdf:Description rdf:about='#metaid_638'> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource='http://identifiers.org/kegg.reaction/R00835'/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference constant='true' metaid='metaid_636' species='G6P' stoichiometry='1'/> </listOfReactants> <listOfProducts> <speciesReference constant='true' metaid='metaid_637' species='sixPGL' stoichiometry='1'/> </listOfProducts> <kineticLaw> <math xmlns='http://www.w3.org/1998/Math/MathML'> <apply> <times/> <ci> default </ci> <apply> <ci> Function_for_vE_G6PDH </ci> <ci> G6P </ci> <ci> KG6PDH_G6P </ci> <ci> KG6PDH_NADP </ci> <ci> KG6PDH_NADPH_g6pinh </ci> <ci> KG6PDH_NADPH_nadpinh </ci> <ci> NADP </ci> <ci> NADPH </ci> <ci> default </ci> <ci> vG6PDH_max </ci> </apply> </apply> </math> </kineticLaw> </reaction> <reaction fast='false' id='vE_GAPDH' metaid='metaid_642' name='vE_GAPDH' reversible='true'> <annotation> <COPASI xmlns='http://www.copasi.org/static/sbml'> <rdf:RDF xmlns:CopasiMT='http://www.copasi.org/RDF/MiriamTerms#' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#'> <rdf:Description rdf:about='#metaid_642'> <CopasiMT:is> <rdf:Bag> <rdf:li rdf:resource='http://identifiers.org/kegg.reaction/R01061'/> </rdf:Bag> </CopasiMT:is> </rdf:Description> </rdf:RDF> </COPASI> <rdf:RDF xmlns:bqbiol='http://biomodels.net/biology-qualifiers/' xmlns:bqmodel='http://biomodels.net/model-qualifiers/' xmlns:dc='http://purl.org/dc/elements/1.1/' xmlns:dcterms='http://purl.org/dc/terms/' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#' xmlns:vCard='http://www.w3.org/2001/vcard-rdf/3.0#'> <rdf:Description rdf:about='#metaid_642'> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource='http://identifiers.org/kegg.reaction/R01061'/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference constant='true' metaid='metaid_639' species='GAP' stoichiometry='1'/> </listOfReactants> <listOfProducts> <speciesReference constant='true' metaid='metaid_640' species='PEP' stoichiometry='1'/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference metaid='metaid_641' species='GAPDH'/> </listOfModifiers> <kineticLaw> <math xmlns='http://www.w3.org/1998/Math/MathML'> <apply> <times/> <ci> default </ci> <apply> <ci> Function_for_vE_GAPDH </ci> <ci> GAP </ci> <ci> GAPDH </ci> <ci> KGAPDH_GAP </ci> <ci> KGAPDH_NAD </ci> <ci> KGAPDH_NADH </ci> <ci> KGAPDH_PGP </ci> <ci> KGAPDH_eq </ci> <ci> NAD </ci> <ci> NADH </ci> <ci> PEP </ci> <ci> default </ci> <ci> kGAPDH_cat </ci> </apply> </apply> </math> </kineticLaw> </reaction> <reaction fast='false' id='vE_Glk' metaid='metaid_646' name='vE_Glk' reversible='true'> <annotation> <COPASI xmlns='http://www.copasi.org/static/sbml'> <rdf:RDF xmlns:CopasiMT='http://www.copasi.org/RDF/MiriamTerms#' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#'> <rdf:Description rdf:about='#metaid_646'> <CopasiMT:is> <rdf:Bag> <rdf:li rdf:resource='http://identifiers.org/kegg.reaction/R00299'/> </rdf:Bag> </CopasiMT:is> </rdf:Description> </rdf:RDF> </COPASI> <rdf:RDF xmlns:bqbiol='http://biomodels.net/biology-qualifiers/' xmlns:bqmodel='http://biomodels.net/model-qualifiers/' xmlns:dc='http://purl.org/dc/elements/1.1/' xmlns:dcterms='http://purl.org/dc/terms/' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#' xmlns:vCard='http://www.w3.org/2001/vcard-rdf/3.0#'> <rdf:Description rdf:about='#metaid_646'> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource='http://identifiers.org/kegg.reaction/R00299'/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference constant='true' metaid='metaid_643' species='GLC' stoichiometry='1'/> </listOfReactants> <listOfProducts> <speciesReference constant='true' metaid='metaid_644' species='G6P' stoichiometry='1'/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference metaid='metaid_645' species='Glk'/> </listOfModifiers> <kineticLaw> <math xmlns='http://www.w3.org/1998/Math/MathML'> <apply> <times/> <ci> default </ci> <apply> <ci> Function_for_vE_Glk </ci> <ci> ATP </ci> <ci> G6P </ci> <ci> GLC </ci> <ci> Glk </ci> <ci> KGlk_ATP_m </ci> <ci> KGlk_G6P_i </ci> <ci> KGlk_GLC_m </ci> <ci> default </ci> <ci> kGlk_cat </ci> </apply> </apply> </math> </kineticLaw> </reaction> <reaction fast='false' id='vE_ICDH' metaid='metaid_651' name='vE_ICDH' reversible='true'> <annotation> <COPASI xmlns='http://www.copasi.org/static/sbml'> <rdf:RDF xmlns:CopasiMT='http://www.copasi.org/RDF/MiriamTerms#' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#'> <rdf:Description rdf:about='#metaid_651'> <CopasiMT:is> <rdf:Bag> <rdf:li rdf:resource='http://identifiers.org/kegg.reaction/R00267'/> </rdf:Bag> </CopasiMT:is> </rdf:Description> </rdf:RDF> </COPASI> <rdf:RDF xmlns:bqbiol='http://biomodels.net/biology-qualifiers/' xmlns:bqmodel='http://biomodels.net/model-qualifiers/' xmlns:dc='http://purl.org/dc/elements/1.1/' xmlns:dcterms='http://purl.org/dc/terms/' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#' xmlns:vCard='http://www.w3.org/2001/vcard-rdf/3.0#'> <rdf:Description rdf:about='#metaid_651'> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource='http://identifiers.org/kegg.reaction/R00267'/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference constant='true' metaid='metaid_647' species='ICIT' stoichiometry='1'/> </listOfReactants> <listOfProducts> <speciesReference constant='true' metaid='metaid_648' species='aKG' stoichiometry='1'/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference metaid='metaid_649' species='PEP'/> <modifierSpeciesReference metaid='metaid_650' species='ICDH'/> </listOfModifiers> <kineticLaw> <math xmlns='http://www.w3.org/1998/Math/MathML'> <apply> <times/> <ci> default </ci> <apply> <ci> Function_for_vE_ICDH </ci> <ci> ICDH </ci> <ci> ICIT </ci> <ci> KICDH_ICIT </ci> <ci> KICDH_PEP </ci> <ci> LICDH </ci> <ci> PEP </ci> <ci> default </ci> <ci> kICDH_cat </ci> <ci> nICDH </ci> </apply> </apply> </math> </kineticLaw> </reaction> <reaction fast='false' id='vE_Icl' metaid='metaid_659' name='vE_Icl' reversible='true'> <annotation> <COPASI xmlns='http://www.copasi.org/static/sbml'> <rdf:RDF xmlns:CopasiMT='http://www.copasi.org/RDF/MiriamTerms#' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#'> <rdf:Description rdf:about='#metaid_659'> <CopasiMT:is> <rdf:Bag> <rdf:li rdf:resource='http://identifiers.org/kegg.reaction/R00479'/> </rdf:Bag> </CopasiMT:is> </rdf:Description> </rdf:RDF> </COPASI> <rdf:RDF xmlns:bqbiol='http://biomodels.net/biology-qualifiers/' xmlns:bqmodel='http://biomodels.net/model-qualifiers/' xmlns:dc='http://purl.org/dc/elements/1.1/' xmlns:dcterms='http://purl.org/dc/terms/' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#' xmlns:vCard='http://www.w3.org/2001/vcard-rdf/3.0#'> <rdf:Description rdf:about='#metaid_659'> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource='http://identifiers.org/kegg.reaction/R00479'/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference constant='true' metaid='metaid_652' species='ICIT' stoichiometry='1'/> </listOfReactants> <listOfProducts> <speciesReference constant='true' metaid='metaid_653' species='GOX' stoichiometry='1'/> <speciesReference constant='true' metaid='metaid_654' species='SUC' stoichiometry='1'/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference metaid='metaid_655' species='GAP'/> <modifierSpeciesReference metaid='metaid_656' species='aKG'/> <modifierSpeciesReference metaid='metaid_657' species='PEP'/> <modifierSpeciesReference metaid='metaid_658' species='Icl'/> </listOfModifiers> <kineticLaw> <math xmlns='http://www.w3.org/1998/Math/MathML'> <apply> <times/> <ci> default </ci> <apply> <ci> Function_for_vE_Icl </ci> <ci> GAP </ci> <ci> ICIT </ci> <ci> Icl </ci> <ci> KIcl_3PG </ci> <ci> KIcl_ICIT </ci> <ci> KIcl_PEP </ci> <ci> KIcl_aKG </ci> <ci> LIcl </ci> <ci> PEP </ci> <ci> aKG </ci> <ci> default </ci> <ci> kIcl_cat </ci> <ci> nIcl </ci> </apply> </apply> </math> </kineticLaw> </reaction> <reaction fast='false' id='vE_MDH' metaid='metaid_662' name='vE_MDH' reversible='true'> <annotation> <COPASI xmlns='http://www.copasi.org/static/sbml'> <rdf:RDF xmlns:CopasiMT='http://www.copasi.org/RDF/MiriamTerms#' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#'> <rdf:Description rdf:about='#metaid_662'> <CopasiMT:is> <rdf:Bag> <rdf:li rdf:resource='http://identifiers.org/kegg.reaction/R00342'/> </rdf:Bag> </CopasiMT:is> </rdf:Description> </rdf:RDF> </COPASI> <rdf:RDF xmlns:bqbiol='http://biomodels.net/biology-qualifiers/' xmlns:bqmodel='http://biomodels.net/model-qualifiers/' xmlns:dc='http://purl.org/dc/elements/1.1/' xmlns:dcterms='http://purl.org/dc/terms/' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#' xmlns:vCard='http://www.w3.org/2001/vcard-rdf/3.0#'> <rdf:Description rdf:about='#metaid_662'> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource='http://identifiers.org/kegg.reaction/R00342'/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference constant='true' metaid='metaid_660' species='MAL' stoichiometry='1'/> </listOfReactants> <listOfProducts> <speciesReference constant='true' metaid='metaid_661' species='OAA' stoichiometry='1'/> </listOfProducts> <kineticLaw> <math xmlns='http://www.w3.org/1998/Math/MathML'> <apply> <times/> <ci> default </ci> <apply> <ci> Function_for_vE_MDH </ci> <ci> KMDH_MAL_I </ci> <ci> KMDH_MAL_m </ci> <ci> KMDH_NADH_I </ci> <ci> KMDH_NADH_m </ci> <ci> KMDH_NAD_I </ci> <ci> KMDH_NAD_II </ci> <ci> KMDH_NAD_m </ci> <ci> KMDH_OAA_I </ci> <ci> KMDH_OAA_II </ci> <ci> KMDH_OAA_m </ci> <ci> KMDH_eq </ci> <ci> MAL </ci> <ci> NAD </ci> <ci> NADH </ci> <ci> OAA </ci> <ci> default </ci> <ci> vMDH1_max </ci> <ci> vMDH2_max </ci> </apply> </apply> </math> </kineticLaw> </reaction> <reaction fast='false' id='vE_MS' metaid='metaid_667' name='vE_MS' reversible='true'> <annotation> <COPASI xmlns='http://www.copasi.org/static/sbml'> <rdf:RDF xmlns:CopasiMT='http://www.copasi.org/RDF/MiriamTerms#' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#'> <rdf:Description rdf:about='#metaid_667'> <CopasiMT:is> <rdf:Bag> <rdf:li rdf:resource='http://identifiers.org/kegg.reaction/R00472'/> </rdf:Bag> </CopasiMT:is> </rdf:Description> </rdf:RDF> </COPASI> <rdf:RDF xmlns:bqbiol='http://biomodels.net/biology-qualifiers/' xmlns:bqmodel='http://biomodels.net/model-qualifiers/' xmlns:dc='http://purl.org/dc/elements/1.1/' xmlns:dcterms='http://purl.org/dc/terms/' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#' xmlns:vCard='http://www.w3.org/2001/vcard-rdf/3.0#'> <rdf:Description rdf:about='#metaid_667'> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource='http://identifiers.org/kegg.reaction/R00472'/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference constant='true' metaid='metaid_663' species='GOX' stoichiometry='1'/> <speciesReference constant='true' metaid='metaid_664' species='AcCoA' stoichiometry='1'/> </listOfReactants> <listOfProducts> <speciesReference constant='true' metaid='metaid_665' species='MAL' stoichiometry='1'/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference metaid='metaid_666' species='MS'/> </listOfModifiers> <kineticLaw> <math xmlns='http://www.w3.org/1998/Math/MathML'> <apply> <times/> <ci> default </ci> <apply> <ci> Function_for_vE_MS </ci> <ci> AcCoA </ci> <ci> GOX </ci> <ci> KMS_AcCoA </ci> <ci> KMS_GOX </ci> <ci> KMS_GOX_AcCoA </ci> <ci> MS </ci> <ci> default </ci> <ci> kMS_cat </ci> </apply> </apply> </math> </kineticLaw> </reaction> <reaction fast='false' id='vE_Mez' metaid='metaid_673' name='vE_Mez' reversible='true'> <annotation> <COPASI xmlns='http://www.copasi.org/static/sbml'> <rdf:RDF xmlns:CopasiMT='http://www.copasi.org/RDF/MiriamTerms#' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#'> <rdf:Description rdf:about='#metaid_673'> <CopasiMT:is> <rdf:Bag> <rdf:li rdf:resource='http://identifiers.org/kegg.reaction/R00216'/> </rdf:Bag> </CopasiMT:is> </rdf:Description> </rdf:RDF> </COPASI> <rdf:RDF xmlns:bqbiol='http://biomodels.net/biology-qualifiers/' xmlns:bqmodel='http://biomodels.net/model-qualifiers/' xmlns:dc='http://purl.org/dc/elements/1.1/' xmlns:dcterms='http://purl.org/dc/terms/' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#' xmlns:vCard='http://www.w3.org/2001/vcard-rdf/3.0#'> <rdf:Description rdf:about='#metaid_673'> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource='http://identifiers.org/kegg.reaction/R00216'/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference constant='true' metaid='metaid_668' species='MAL' stoichiometry='1'/> </listOfReactants> <listOfProducts> <speciesReference constant='true' metaid='metaid_669' species='PYR' stoichiometry='1'/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference metaid='metaid_670' species='Mez'/> <modifierSpeciesReference metaid='metaid_671' species='AcCoA'/> <modifierSpeciesReference metaid='metaid_672' species='cAMP'/> </listOfModifiers> <kineticLaw> <math xmlns='http://www.w3.org/1998/Math/MathML'> <apply> <times/> <ci> default </ci> <apply> <ci> Function_for_vE_Mez </ci> <ci> AcCoA </ci> <ci> KMez_AcCoA </ci> <ci> KMez_MAL </ci> <ci> KMez_cAMP </ci> <ci> LMez </ci> <ci> MAL </ci> <ci> Mez </ci> <ci> cAMP </ci> <ci> default </ci> <ci> kMez_cat </ci> <ci> nMez </ci> </apply> </apply> </math> </kineticLaw> </reaction> <reaction fast='false' id='vE_PDH' metaid='metaid_677' name='vE_PDH' reversible='true'> <annotation> <COPASI xmlns='http://www.copasi.org/static/sbml'> <rdf:RDF xmlns:CopasiMT='http://www.copasi.org/RDF/MiriamTerms#' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#'> <rdf:Description rdf:about='#metaid_677'> <CopasiMT:is> <rdf:Bag> <rdf:li rdf:resource='http://identifiers.org/kegg.reaction/R00209'/> </rdf:Bag> </CopasiMT:is> </rdf:Description> </rdf:RDF> </COPASI> <rdf:RDF xmlns:bqbiol='http://biomodels.net/biology-qualifiers/' xmlns:bqmodel='http://biomodels.net/model-qualifiers/' xmlns:dc='http://purl.org/dc/elements/1.1/' xmlns:dcterms='http://purl.org/dc/terms/' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#' xmlns:vCard='http://www.w3.org/2001/vcard-rdf/3.0#'> <rdf:Description rdf:about='#metaid_677'> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource='http://identifiers.org/kegg.reaction/R00209'/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference constant='true' metaid='metaid_674' species='PYR' stoichiometry='1'/> </listOfReactants> <listOfProducts> <speciesReference constant='true' metaid='metaid_675' species='AcCoA' stoichiometry='1'/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference metaid='metaid_676' species='PDH'/> </listOfModifiers> <kineticLaw> <math xmlns='http://www.w3.org/1998/Math/MathML'> <apply> <times/> <ci> default </ci> <apply> <ci> Function_for_vE_PDH </ci> <ci> AcCoA </ci> <ci> CoA </ci> <ci> KPDH_AcCoA_m </ci> <ci> KPDH_CoA_m </ci> <ci> KPDH_NADH_m </ci> <ci> KPDH_NAD_m </ci> <ci> KPDH_PYR_m </ci> <ci> KPDH_i </ci> <ci> NAD </ci> <ci> NADH </ci> <ci> PDH </ci> <ci> PYR </ci> <ci> default </ci> <ci> kPDH_cat </ci> </apply> </apply> </math> </kineticLaw> </reaction> <reaction fast='false' id='vE_Pck' metaid='metaid_681' name='vE_Pck' reversible='true'> <annotation> <COPASI xmlns='http://www.copasi.org/static/sbml'> <rdf:RDF xmlns:CopasiMT='http://www.copasi.org/RDF/MiriamTerms#' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#'> <rdf:Description rdf:about='#metaid_681'> <CopasiMT:is> <rdf:Bag> <rdf:li rdf:resource='http://identifiers.org/kegg.reaction/R00341'/> </rdf:Bag> </CopasiMT:is> </rdf:Description> </rdf:RDF> </COPASI> <rdf:RDF xmlns:bqbiol='http://biomodels.net/biology-qualifiers/' xmlns:bqmodel='http://biomodels.net/model-qualifiers/' xmlns:dc='http://purl.org/dc/elements/1.1/' xmlns:dcterms='http://purl.org/dc/terms/' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#' xmlns:vCard='http://www.w3.org/2001/vcard-rdf/3.0#'> <rdf:Description rdf:about='#metaid_681'> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource='http://identifiers.org/kegg.reaction/R00341'/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference constant='true' metaid='metaid_678' species='OAA' stoichiometry='1'/> </listOfReactants> <listOfProducts> <speciesReference constant='true' metaid='metaid_679' species='PEP' stoichiometry='1'/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference metaid='metaid_680' species='Pck'/> </listOfModifiers> <kineticLaw> <math xmlns='http://www.w3.org/1998/Math/MathML'> <apply> <times/> <ci> default </ci> <apply> <ci> Function_for_vE_Pck </ci> <ci> ADP </ci> <ci> ATP </ci> <ci> KPck_ADP_i </ci> <ci> KPck_ATP_I </ci> <ci> KPck_ATP_i </ci> <ci> KPck_OAA </ci> <ci> KPck_OAA_I </ci> <ci> KPck_PEP </ci> <ci> KPck_PEP_i </ci> <ci> OAA </ci> <ci> PEP </ci> <ci> Pck </ci> <ci> default </ci> <ci> kPck_cat </ci> </apply> </apply> </math> </kineticLaw> </reaction> <reaction fast='false' id='vE_Pfk' metaid='metaid_685' name='vE_Pfk' reversible='true'> <annotation> <COPASI xmlns='http://www.copasi.org/static/sbml'> <rdf:RDF xmlns:CopasiMT='http://www.copasi.org/RDF/MiriamTerms#' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#'> <rdf:Description rdf:about='#metaid_685'> <CopasiMT:is> <rdf:Bag> <rdf:li rdf:resource='http://identifiers.org/kegg.reaction/R00756'/> </rdf:Bag> </CopasiMT:is> </rdf:Description> </rdf:RDF> </COPASI> <rdf:RDF xmlns:bqbiol='http://biomodels.net/biology-qualifiers/' xmlns:bqmodel='http://biomodels.net/model-qualifiers/' xmlns:dc='http://purl.org/dc/elements/1.1/' xmlns:dcterms='http://purl.org/dc/terms/' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#' xmlns:vCard='http://www.w3.org/2001/vcard-rdf/3.0#'> <rdf:Description rdf:about='#metaid_685'> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource='http://identifiers.org/kegg.reaction/R00756'/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference constant='true' metaid='metaid_682' species='F6P' stoichiometry='1'/> </listOfReactants> <listOfProducts> <speciesReference constant='true' metaid='metaid_683' species='FBP' stoichiometry='1'/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference metaid='metaid_684' species='Pfk'/> </listOfModifiers> <kineticLaw> <math xmlns='http://www.w3.org/1998/Math/MathML'> <apply> <times/> <ci> default </ci> <apply> <ci> Function_for_vE_Pfk </ci> <ci> A </ci> <ci> ADP </ci> <ci> ATP </ci> <ci> B </ci> <ci> F6P </ci> <ci> KPfk_ADP_c </ci> <ci> KPfk_ATP_s </ci> <ci> KPfk_F6P_s </ci> <ci> LPfk </ci> <ci> Pfk </ci> <ci> default </ci> <ci> kPfk_cat </ci> <ci> nPfk </ci> </apply> </apply> </math> </kineticLaw> </reaction> <reaction fast='false' id='vE_Pgi' metaid='metaid_689' name='vE_Pgi' reversible='true'> <annotation> <COPASI xmlns='http://www.copasi.org/static/sbml'> <rdf:RDF xmlns:CopasiMT='http://www.copasi.org/RDF/MiriamTerms#' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#'> <rdf:Description rdf:about='#metaid_689'> <CopasiMT:is> <rdf:Bag> <rdf:li rdf:resource='http://identifiers.org/kegg.reaction/R00771'/> </rdf:Bag> </CopasiMT:is> </rdf:Description> </rdf:RDF> </COPASI> <rdf:RDF xmlns:bqbiol='http://biomodels.net/biology-qualifiers/' xmlns:bqmodel='http://biomodels.net/model-qualifiers/' xmlns:dc='http://purl.org/dc/elements/1.1/' xmlns:dcterms='http://purl.org/dc/terms/' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#' xmlns:vCard='http://www.w3.org/2001/vcard-rdf/3.0#'> <rdf:Description rdf:about='#metaid_689'> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource='http://identifiers.org/kegg.reaction/R00771'/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference constant='true' metaid='metaid_686' species='G6P' stoichiometry='1'/> </listOfReactants> <listOfProducts> <speciesReference constant='true' metaid='metaid_687' species='F6P' stoichiometry='1'/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference metaid='metaid_688' species='sixPG'/> </listOfModifiers> <kineticLaw> <math xmlns='http://www.w3.org/1998/Math/MathML'> <apply> <times/> <ci> default </ci> <apply> <ci> Function_for_vE_Pgi </ci> <ci> F6P </ci> <ci> G6P </ci> <ci> KPgi_F6P </ci> <ci> KPgi_F6P_6pginh </ci> <ci> KPgi_G6P </ci> <ci> KPgi_G6P_6pginh </ci> <ci> KPgi_eq </ci> <ci> default </ci> <ci> sixPG </ci> <ci> vPgi_max </ci> </apply> </apply> </math> </kineticLaw> </reaction> <reaction fast='false' id='vE_Pgl' metaid='metaid_692' name='vE_Pgl' reversible='true'> <annotation> <COPASI xmlns='http://www.copasi.org/static/sbml'> <rdf:RDF xmlns:CopasiMT='http://www.copasi.org/RDF/MiriamTerms#' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#'> <rdf:Description rdf:about='#metaid_692'> <CopasiMT:is> <rdf:Bag> <rdf:li rdf:resource='http://identifiers.org/kegg.reaction/R02035'/> </rdf:Bag> </CopasiMT:is> </rdf:Description> </rdf:RDF> </COPASI> <rdf:RDF xmlns:bqbiol='http://biomodels.net/biology-qualifiers/' xmlns:bqmodel='http://biomodels.net/model-qualifiers/' xmlns:dc='http://purl.org/dc/elements/1.1/' xmlns:dcterms='http://purl.org/dc/terms/' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#' xmlns:vCard='http://www.w3.org/2001/vcard-rdf/3.0#'> <rdf:Description rdf:about='#metaid_692'> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource='http://identifiers.org/kegg.reaction/R02035'/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference constant='true' metaid='metaid_690' species='sixPGL' stoichiometry='1'/> </listOfReactants> <listOfProducts> <speciesReference constant='true' metaid='metaid_691' species='sixPG' stoichiometry='1'/> </listOfProducts> <kineticLaw> <math xmlns='http://www.w3.org/1998/Math/MathML'> <apply> <times/> <ci> default </ci> <apply> <ci> Function_for_vE_Pgl </ci> <ci> H </ci> <ci> KPgl_6PGL_m </ci> <ci> KPgl_6PG_m </ci> <ci> KPgl_eq </ci> <ci> KPgl_h1 </ci> <ci> KPgl_h2 </ci> <ci> default </ci> <ci> sixPG </ci> <ci> sixPGL </ci> <ci> vPgl_max </ci> </apply> </apply> </math> </kineticLaw> </reaction> <reaction fast='false' id='vE_Ppc' metaid='metaid_697' name='vE_Ppc' reversible='true'> <annotation> <COPASI xmlns='http://www.copasi.org/static/sbml'> <rdf:RDF xmlns:CopasiMT='http://www.copasi.org/RDF/MiriamTerms#' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#'> <rdf:Description rdf:about='#metaid_697'> <CopasiMT:is> <rdf:Bag> <rdf:li rdf:resource='http://identifiers.org/kegg.reaction/R00345'/> </rdf:Bag> </CopasiMT:is> </rdf:Description> </rdf:RDF> </COPASI> <rdf:RDF xmlns:bqbiol='http://biomodels.net/biology-qualifiers/' xmlns:bqmodel='http://biomodels.net/model-qualifiers/' xmlns:dc='http://purl.org/dc/elements/1.1/' xmlns:dcterms='http://purl.org/dc/terms/' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#' xmlns:vCard='http://www.w3.org/2001/vcard-rdf/3.0#'> <rdf:Description rdf:about='#metaid_697'> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource='http://identifiers.org/kegg.reaction/R00345'/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference constant='true' metaid='metaid_693' species='PEP' stoichiometry='1'/> </listOfReactants> <listOfProducts> <speciesReference constant='true' metaid='metaid_694' species='OAA' stoichiometry='1'/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference metaid='metaid_695' species='FBP'/> <modifierSpeciesReference metaid='metaid_696' species='Ppc'/> </listOfModifiers> <kineticLaw> <math xmlns='http://www.w3.org/1998/Math/MathML'> <apply> <times/> <ci> default </ci> <apply> <ci> Function_for_vE_Ppc </ci> <ci> FBP </ci> <ci> KPpc_FBP </ci> <ci> KPpc_PEP </ci> <ci> LPpc </ci> <ci> PEP </ci> <ci> Ppc </ci> <ci> default </ci> <ci> kPpc_cat </ci> <ci> nPpc </ci> </apply> </apply> </math> </kineticLaw> </reaction> <reaction fast='false' id='vE_Pps' metaid='metaid_701' name='vE_Pps' reversible='true'> <annotation> <COPASI xmlns='http://www.copasi.org/static/sbml'> <rdf:RDF xmlns:CopasiMT='http://www.copasi.org/RDF/MiriamTerms#' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#'> <rdf:Description rdf:about='#metaid_701'> <CopasiMT:is> <rdf:Bag> <rdf:li rdf:resource='http://identifiers.org/kegg.reaction/R00199'/> </rdf:Bag> </CopasiMT:is> </rdf:Description> </rdf:RDF> </COPASI> <rdf:RDF xmlns:bqbiol='http://biomodels.net/biology-qualifiers/' xmlns:bqmodel='http://biomodels.net/model-qualifiers/' xmlns:dc='http://purl.org/dc/elements/1.1/' xmlns:dcterms='http://purl.org/dc/terms/' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#' xmlns:vCard='http://www.w3.org/2001/vcard-rdf/3.0#'> <rdf:Description rdf:about='#metaid_701'> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource='http://identifiers.org/kegg.reaction/R00199'/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference constant='true' metaid='metaid_698' species='PYR' stoichiometry='1'/> </listOfReactants> <listOfProducts> <speciesReference constant='true' metaid='metaid_699' species='PEP' stoichiometry='1'/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference metaid='metaid_700' species='Pps'/> </listOfModifiers> <kineticLaw> <math xmlns='http://www.w3.org/1998/Math/MathML'> <apply> <times/> <ci> default </ci> <apply> <ci> Function_for_vE_Pps </ci> <ci> KPps_PEP </ci> <ci> KPps_PYR </ci> <ci> LPps </ci> <ci> PEP </ci> <ci> PYR </ci> <ci> Pps </ci> <ci> default </ci> <ci> kPps_cat </ci> <ci> nPps </ci> </apply> </apply> </math> </kineticLaw> </reaction> <reaction fast='false' id='vE_Pta' metaid='metaid_704' name='vE_Pta' reversible='true'> <annotation> <COPASI xmlns='http://www.copasi.org/static/sbml'> <rdf:RDF xmlns:CopasiMT='http://www.copasi.org/RDF/MiriamTerms#' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#'> <rdf:Description rdf:about='#metaid_704'> <CopasiMT:is> <rdf:Bag> <rdf:li rdf:resource='http://identifiers.org/kegg.reaction/R00230'/> </rdf:Bag> </CopasiMT:is> </rdf:Description> </rdf:RDF> </COPASI> <rdf:RDF xmlns:bqbiol='http://biomodels.net/biology-qualifiers/' xmlns:bqmodel='http://biomodels.net/model-qualifiers/' xmlns:dc='http://purl.org/dc/elements/1.1/' xmlns:dcterms='http://purl.org/dc/terms/' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#' xmlns:vCard='http://www.w3.org/2001/vcard-rdf/3.0#'> <rdf:Description rdf:about='#metaid_704'> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource='http://identifiers.org/kegg.reaction/R00230'/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference constant='true' metaid='metaid_702' species='AcCoA' stoichiometry='1'/> </listOfReactants> <listOfProducts> <speciesReference constant='true' metaid='metaid_703' species='AcP' stoichiometry='1'/> </listOfProducts> <kineticLaw> <math xmlns='http://www.w3.org/1998/Math/MathML'> <apply> <times/> <ci> default </ci> <apply> <ci> Function_for_vE_Pta </ci> <ci> AcCoA </ci> <ci> AcP </ci> <ci> CoA </ci> <ci> KPta_AcCoA_i </ci> <ci> KPta_AcP_i </ci> <ci> KPta_AcP_m </ci> <ci> KPta_CoA_i </ci> <ci> KPta_Pi_i </ci> <ci> KPta_Pi_m </ci> <ci> KPta_eq </ci> <ci> Pi </ci> <ci> default </ci> <ci> vPta_max </ci> </apply> </apply> </math> </kineticLaw> </reaction> <reaction fast='false' id='vE_Pyk' metaid='metaid_709' name='vE_Pyk' reversible='true'> <annotation> <COPASI xmlns='http://www.copasi.org/static/sbml'> <rdf:RDF xmlns:CopasiMT='http://www.copasi.org/RDF/MiriamTerms#' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#'> <rdf:Description rdf:about='#metaid_709'> <CopasiMT:is> <rdf:Bag> <rdf:li rdf:resource='http://identifiers.org/kegg.reaction/R00200'/> </rdf:Bag> </CopasiMT:is> </rdf:Description> </rdf:RDF> </COPASI> <rdf:RDF xmlns:bqbiol='http://biomodels.net/biology-qualifiers/' xmlns:bqmodel='http://biomodels.net/model-qualifiers/' xmlns:dc='http://purl.org/dc/elements/1.1/' xmlns:dcterms='http://purl.org/dc/terms/' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#' xmlns:vCard='http://www.w3.org/2001/vcard-rdf/3.0#'> <rdf:Description rdf:about='#metaid_709'> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource='http://identifiers.org/kegg.reaction/R00200'/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference constant='true' metaid='metaid_705' species='PEP' stoichiometry='1'/> </listOfReactants> <listOfProducts> <speciesReference constant='true' metaid='metaid_706' species='PYR' stoichiometry='1'/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference metaid='metaid_707' species='Pyk'/> <modifierSpeciesReference metaid='metaid_708' species='FBP'/> </listOfModifiers> <kineticLaw> <math xmlns='http://www.w3.org/1998/Math/MathML'> <apply> <times/> <ci> default </ci> <apply> <ci> Function_for_vE_Pyk </ci> <ci> ADP </ci> <ci> AMP </ci> <ci> ATP </ci> <ci> FBP </ci> <ci> KPyk_ADP </ci> <ci> KPyk_AMP </ci> <ci> KPyk_ATP </ci> <ci> KPyk_FBP </ci> <ci> KPyk_PEP </ci> <ci> LPyk </ci> <ci> PEP </ci> <ci> Pyk </ci> <ci> default </ci> <ci> kPyk_cat </ci> <ci> nPyk </ci> </apply> </apply> </math> </kineticLaw> </reaction> <reaction fast='false' id='vE_R5PI' metaid='metaid_712' name='vE_R5PI' reversible='true'> <annotation> <COPASI xmlns='http://www.copasi.org/static/sbml'> <rdf:RDF xmlns:CopasiMT='http://www.copasi.org/RDF/MiriamTerms#' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#'> <rdf:Description rdf:about='#metaid_712'> <CopasiMT:is> <rdf:Bag> <rdf:li rdf:resource='http://identifiers.org/kegg.reaction/R01056'/> </rdf:Bag> </CopasiMT:is> </rdf:Description> </rdf:RDF> </COPASI> <rdf:RDF xmlns:bqbiol='http://biomodels.net/biology-qualifiers/' xmlns:bqmodel='http://biomodels.net/model-qualifiers/' xmlns:dc='http://purl.org/dc/elements/1.1/' xmlns:dcterms='http://purl.org/dc/terms/' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#' xmlns:vCard='http://www.w3.org/2001/vcard-rdf/3.0#'> <rdf:Description rdf:about='#metaid_712'> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource='http://identifiers.org/kegg.reaction/R01056'/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference constant='true' metaid='metaid_710' species='RU5P' stoichiometry='1'/> </listOfReactants> <listOfProducts> <speciesReference constant='true' metaid='metaid_711' species='R5P' stoichiometry='1'/> </listOfProducts> <kineticLaw> <math xmlns='http://www.w3.org/1998/Math/MathML'> <apply> <times/> <ci> default </ci> <apply> <ci> Function_for_vE_R5PI </ci> <ci> KR5PI_eq </ci> <ci> R5P </ci> <ci> RU5P </ci> <ci> default </ci> <ci> vR5PI_max </ci> </apply> </apply> </math> </kineticLaw> </reaction> <reaction fast='false' id='vE_Ru5P' metaid='metaid_715' name='vE_Ru5P' reversible='true'> <annotation> <COPASI xmlns='http://www.copasi.org/static/sbml'> <rdf:RDF xmlns:CopasiMT='http://www.copasi.org/RDF/MiriamTerms#' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#'> <rdf:Description rdf:about='#metaid_715'> <CopasiMT:is> <rdf:Bag> <rdf:li rdf:resource='http://identifiers.org/kegg.reaction/R01529'/> </rdf:Bag> </CopasiMT:is> </rdf:Description> </rdf:RDF> </COPASI> <rdf:RDF xmlns:bqbiol='http://biomodels.net/biology-qualifiers/' xmlns:bqmodel='http://biomodels.net/model-qualifiers/' xmlns:dc='http://purl.org/dc/elements/1.1/' xmlns:dcterms='http://purl.org/dc/terms/' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#' xmlns:vCard='http://www.w3.org/2001/vcard-rdf/3.0#'> <rdf:Description rdf:about='#metaid_715'> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource='http://identifiers.org/kegg.reaction/R01529'/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference constant='true' metaid='metaid_713' species='RU5P' stoichiometry='1'/> </listOfReactants> <listOfProducts> <speciesReference constant='true' metaid='metaid_714' species='X5P' stoichiometry='1'/> </listOfProducts> <kineticLaw> <math xmlns='http://www.w3.org/1998/Math/MathML'> <apply> <times/> <ci> default </ci> <apply> <ci> Function_for_vE_Ru5P </ci> <ci> KRu5P_eq </ci> <ci> RU5P </ci> <ci> X5P </ci> <ci> default </ci> <ci> vRu5P_max </ci> </apply> </apply> </math> </kineticLaw> </reaction> <reaction fast='false' id='vE_SDH' metaid='metaid_718' name='vE_SDH' reversible='true'> <annotation> <COPASI xmlns='http://www.copasi.org/static/sbml'> <rdf:RDF xmlns:CopasiMT='http://www.copasi.org/RDF/MiriamTerms#' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#'> <rdf:Description rdf:about='#metaid_718'> <CopasiMT:is> <rdf:Bag> <rdf:li rdf:resource='http://identifiers.org/kegg.reaction/R02164'/> </rdf:Bag> </CopasiMT:is> </rdf:Description> </rdf:RDF> </COPASI> <rdf:RDF xmlns:bqbiol='http://biomodels.net/biology-qualifiers/' xmlns:bqmodel='http://biomodels.net/model-qualifiers/' xmlns:dc='http://purl.org/dc/elements/1.1/' xmlns:dcterms='http://purl.org/dc/terms/' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#' xmlns:vCard='http://www.w3.org/2001/vcard-rdf/3.0#'> <rdf:Description rdf:about='#metaid_718'> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource='http://identifiers.org/kegg.reaction/R02164'/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference constant='true' metaid='metaid_716' species='SUC' stoichiometry='1'/> </listOfReactants> <listOfProducts> <speciesReference constant='true' metaid='metaid_717' species='FUM' stoichiometry='1'/> </listOfProducts> <kineticLaw> <math xmlns='http://www.w3.org/1998/Math/MathML'> <apply> <times/> <ci> default </ci> <apply> <ci> Function_for_vE_SDH </ci> <ci> FUM </ci> <ci> KSDH_SUC_m </ci> <ci> KSDH_eq </ci> <ci> SUC </ci> <ci> default </ci> <ci> vSDH1_max </ci> <ci> vSDH2_max </ci> </apply> </apply> </math> </kineticLaw> </reaction> <reaction fast='false' id='vE_Tal' metaid='metaid_723' name='vE_Tal' reversible='true'> <annotation> <COPASI xmlns='http://www.copasi.org/static/sbml'> <rdf:RDF xmlns:CopasiMT='http://www.copasi.org/RDF/MiriamTerms#' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#'> <rdf:Description rdf:about='#metaid_723'> <CopasiMT:is> <rdf:Bag> <rdf:li rdf:resource='http://identifiers.org/kegg.reaction/R08575'/> </rdf:Bag> </CopasiMT:is> </rdf:Description> </rdf:RDF> </COPASI> <rdf:RDF xmlns:bqbiol='http://biomodels.net/biology-qualifiers/' xmlns:bqmodel='http://biomodels.net/model-qualifiers/' xmlns:dc='http://purl.org/dc/elements/1.1/' xmlns:dcterms='http://purl.org/dc/terms/' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#' xmlns:vCard='http://www.w3.org/2001/vcard-rdf/3.0#'> <rdf:Description rdf:about='#metaid_723'> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource='http://identifiers.org/kegg.reaction/R08575'/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference constant='true' metaid='metaid_719' species='GAP' stoichiometry='1'/> <speciesReference constant='true' metaid='metaid_720' species='S7P' stoichiometry='1'/> </listOfReactants> <listOfProducts> <speciesReference constant='true' metaid='metaid_721' species='E4P' stoichiometry='1'/> <speciesReference constant='true' metaid='metaid_722' species='F6P' stoichiometry='1'/> </listOfProducts> <kineticLaw> <math xmlns='http://www.w3.org/1998/Math/MathML'> <apply> <times/> <ci> default </ci> <apply> <ci> Function_for_vE_Tal </ci> <ci> E4P </ci> <ci> F6P </ci> <ci> GAP </ci> <ci> KTal_eq </ci> <ci> S7P </ci> <ci> default </ci> <ci> vTal_max </ci> </apply> </apply> </math> </kineticLaw> </reaction> <reaction fast='false' id='vE_TktA' metaid='metaid_728' name='vE_TktA' reversible='true'> <annotation> <COPASI xmlns='http://www.copasi.org/static/sbml'> <rdf:RDF xmlns:CopasiMT='http://www.copasi.org/RDF/MiriamTerms#' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#'> <rdf:Description rdf:about='#metaid_728'> <CopasiMT:is> <rdf:Bag> <rdf:li rdf:resource='http://identifiers.org/kegg.reaction/R01641'/> </rdf:Bag> </CopasiMT:is> </rdf:Description> </rdf:RDF> </COPASI> <rdf:RDF xmlns:bqbiol='http://biomodels.net/biology-qualifiers/' xmlns:bqmodel='http://biomodels.net/model-qualifiers/' xmlns:dc='http://purl.org/dc/elements/1.1/' xmlns:dcterms='http://purl.org/dc/terms/' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#' xmlns:vCard='http://www.w3.org/2001/vcard-rdf/3.0#'> <rdf:Description rdf:about='#metaid_728'> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource='http://identifiers.org/kegg.reaction/R01641'/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference constant='true' metaid='metaid_724' species='X5P' stoichiometry='1'/> <speciesReference constant='true' metaid='metaid_725' species='R5P' stoichiometry='1'/> </listOfReactants> <listOfProducts> <speciesReference constant='true' metaid='metaid_726' species='S7P' stoichiometry='1'/> <speciesReference constant='true' metaid='metaid_727' species='GAP' stoichiometry='1'/> </listOfProducts> <kineticLaw> <math xmlns='http://www.w3.org/1998/Math/MathML'> <apply> <times/> <ci> default </ci> <apply> <ci> Function_for_vE_TktA </ci> <ci> GAP </ci> <ci> KTktA_eq </ci> <ci> R5P </ci> <ci> S7P </ci> <ci> X5P </ci> <ci> default </ci> <ci> vTktA_max </ci> </apply> </apply> </math> </kineticLaw> </reaction> <reaction fast='false' id='vE_TktB' metaid='metaid_733' name='vE_TktB' reversible='true'> <annotation> <COPASI xmlns='http://www.copasi.org/static/sbml'> <rdf:RDF xmlns:CopasiMT='http://www.copasi.org/RDF/MiriamTerms#' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#'> <rdf:Description rdf:about='#metaid_733'> <CopasiMT:is> <rdf:Bag> <rdf:li rdf:resource='http://identifiers.org/kegg.reaction/R01067'/> </rdf:Bag> </CopasiMT:is> </rdf:Description> </rdf:RDF> </COPASI> <rdf:RDF xmlns:bqbiol='http://biomodels.net/biology-qualifiers/' xmlns:bqmodel='http://biomodels.net/model-qualifiers/' xmlns:dc='http://purl.org/dc/elements/1.1/' xmlns:dcterms='http://purl.org/dc/terms/' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#' xmlns:vCard='http://www.w3.org/2001/vcard-rdf/3.0#'> <rdf:Description rdf:about='#metaid_733'> <bqbiol:is> <rdf:Bag> <rdf:li 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xmlns='http://www.copasi.org/static/sbml'> <rdf:RDF xmlns:CopasiMT='http://www.copasi.org/RDF/MiriamTerms#' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#'> <rdf:Description rdf:about='#metaid_737'> <CopasiMT:is> <rdf:Bag> <rdf:li rdf:resource='http://identifiers.org/kegg.reaction/R01700'/> </rdf:Bag> </CopasiMT:is> <CopasiMT:is> <rdf:Bag> <rdf:li rdf:resource='http://identifiers.org/kegg.reaction/R02570'/> </rdf:Bag> </CopasiMT:is> </rdf:Description> </rdf:RDF> </COPASI> <rdf:RDF xmlns:bqbiol='http://biomodels.net/biology-qualifiers/' xmlns:bqmodel='http://biomodels.net/model-qualifiers/' xmlns:dc='http://purl.org/dc/elements/1.1/' xmlns:dcterms='http://purl.org/dc/terms/' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#' xmlns:vCard='http://www.w3.org/2001/vcard-rdf/3.0#'> <rdf:Description rdf:about='#metaid_737'> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource='http://identifiers.org/kegg.reaction/R02570'/> </rdf:Bag> </bqbiol:is> <bqbiol:is> <rdf:Bag> <rdf:li 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id='vE_cAMPdegr' metaid='metaid_739' name='vE_cAMPdegr' reversible='true'> <annotation> <COPASI xmlns='http://www.copasi.org/static/sbml'> <rdf:RDF xmlns:dcterms='http://purl.org/dc/terms/' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#'> <rdf:Description rdf:about='#metaid_739'> <dcterms:created> <rdf:Description> <dcterms:W3CDTF>2015-12-30T20:33:17Z</dcterms:W3CDTF> </rdf:Description> </dcterms:created> </rdf:Description> </rdf:RDF> </COPASI> </annotation> <listOfReactants> <speciesReference constant='true' metaid='metaid_738' species='cAMP' stoichiometry='1'/> </listOfReactants> <kineticLaw> <math xmlns='http://www.w3.org/1998/Math/MathML'> <apply> <times/> <ci> default </ci> <apply> <ci> Function_for_vE_cAMPdegr </ci> <ci> KcAMPdegr_cAMP </ci> <ci> cAMP </ci> <ci> default </ci> <ci> vcAMPdegr_max </ci> </apply> </apply> </math> </kineticLaw> </reaction> <reaction fast='false' id='vG_aceA' metaid='metaid_743' name='vG_aceA' reversible='true'> <annotation> <COPASI 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KaceBAK_PYRprime </ci> <ci> LaceBAK </ci> <ci> PYR </ci> <ci> aceBAK_DNA </ci> <ci> default </ci> <ci> kaceBAK_cat_IclR </ci> <ci> kexpr </ci> <ci> mu </ci> <ci> vaceBAK_Cra_bound </ci> <ci> vaceBAK_Cra_unbound </ci> <ci> vaceBAK_Crp_bound </ci> <ci> vaceBAK_Crp_unbound </ci> </apply> </apply> </math> </kineticLaw> </reaction> <reaction fast='false' id='vG_aceB' metaid='metaid_747' name='vG_aceB' reversible='true'> <annotation> <COPASI xmlns='http://www.copasi.org/static/sbml'> <rdf:RDF xmlns:dcterms='http://purl.org/dc/terms/' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#'> <rdf:Description rdf:about='#metaid_747'> <dcterms:created> <rdf:Description> <dcterms:W3CDTF>2015-12-30T20:32:47Z</dcterms:W3CDTF> </rdf:Description> </dcterms:created> </rdf:Description> </rdf:RDF> </COPASI> </annotation> <listOfProducts> <speciesReference constant='true' metaid='metaid_744' species='MS' stoichiometry='1'/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference metaid='metaid_745' species='GOX'/> <modifierSpeciesReference metaid='metaid_746' species='PYR'/> </listOfModifiers> <kineticLaw> <math xmlns='http://www.w3.org/1998/Math/MathML'> <apply> <times/> <ci> default </ci> <apply> <ci> Function_for_vG_aceB </ci> <ci> Cra </ci> <ci> CrpcAMP </ci> <ci> Factor_aceB </ci> <ci> GOX </ci> <ci> IclRtotal </ci> <ci> KaceBAK_Cra </ci> <ci> KaceBAK_Crp </ci> <ci> KaceBAK_DNA </ci> <ci> KaceBAK_GOX </ci> <ci> KaceBAK_PYR </ci> <ci> KaceBAK_PYRprime </ci> <ci> LaceBAK </ci> <ci> PYR </ci> <ci> aceBAK_DNA </ci> <ci> default </ci> <ci> kaceBAK_cat_IclR </ci> <ci> kexpr </ci> <ci> mu </ci> <ci> vaceBAK_Cra_bound </ci> <ci> vaceBAK_Cra_unbound </ci> <ci> vaceBAK_Crp_bound </ci> <ci> vaceBAK_Crp_unbound </ci> </apply> </apply> </math> </kineticLaw> </reaction> <reaction fast='false' id='vG_aceK' metaid='metaid_751' name='vG_aceK' reversible='true'> <annotation> <COPASI xmlns='http://www.copasi.org/static/sbml'> <rdf:RDF xmlns:dcterms='http://purl.org/dc/terms/' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#'> <rdf:Description rdf:about='#metaid_751'> <dcterms:created> <rdf:Description> <dcterms:W3CDTF>2015-12-30T20:32:46Z</dcterms:W3CDTF> </rdf:Description> </dcterms:created> </rdf:Description> </rdf:RDF> </COPASI> </annotation> <listOfProducts> <speciesReference constant='true' metaid='metaid_748' species='AceK' stoichiometry='1'/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference metaid='metaid_749' species='GOX'/> <modifierSpeciesReference metaid='metaid_750' species='PYR'/> </listOfModifiers> <kineticLaw> <math xmlns='http://www.w3.org/1998/Math/MathML'> <apply> <times/> <ci> default </ci> <apply> <ci> Function_for_vG_aceK </ci> <ci> Cra </ci> <ci> CrpcAMP </ci> <ci> Factor_aceK </ci> <ci> GOX </ci> <ci> IclRtotal </ci> <ci> KaceBAK_Cra </ci> <ci> KaceBAK_Crp </ci> <ci> KaceBAK_DNA </ci> <ci> KaceBAK_GOX </ci> <ci> KaceBAK_PYR </ci> <ci> KaceBAK_PYRprime </ci> <ci> LaceBAK </ci> <ci> PYR </ci> <ci> aceBAK_DNA </ci> <ci> default </ci> <ci> kaceBAK_cat_IclR </ci> <ci> kexpr </ci> <ci> mu </ci> <ci> vaceBAK_Cra_bound </ci> <ci> vaceBAK_Cra_unbound </ci> <ci> vaceBAK_Crp_bound </ci> <ci> vaceBAK_Crp_unbound </ci> </apply> </apply> </math> </kineticLaw> </reaction> <reaction fast='false' id='vG_acs' metaid='metaid_753' name='vG_acs' reversible='true'> <annotation> <COPASI xmlns='http://www.copasi.org/static/sbml'> <rdf:RDF xmlns:dcterms='http://purl.org/dc/terms/' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#'> <rdf:Description rdf:about='#metaid_753'> <dcterms:created> <rdf:Description> <dcterms:W3CDTF>2015-12-30T20:32:46Z</dcterms:W3CDTF> </rdf:Description> </dcterms:created> </rdf:Description> </rdf:RDF> </COPASI> </annotation> <listOfProducts> <speciesReference constant='true' metaid='metaid_752' species='Acs' stoichiometry='1'/> </listOfProducts> <kineticLaw> <math xmlns='http://www.w3.org/1998/Math/MathML'> <apply> <times/> <ci> default </ci> <apply> <ci> Function_for_vG_acs </ci> <ci> 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Cra </ci> <ci> Kfbp_Cra </ci> <ci> default </ci> <ci> kexpr </ci> <ci> mu </ci> <ci> vfbp_Cra_bound </ci> <ci> vfbp_Cra_unbound </ci> </apply> </apply> </math> </kineticLaw> </reaction> <reaction fast='false' id='vG_fumABC' metaid='metaid_759' name='vG_fumABC' reversible='true'> <annotation> <COPASI xmlns='http://www.copasi.org/static/sbml'> <rdf:RDF xmlns:dcterms='http://purl.org/dc/terms/' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#'> <rdf:Description rdf:about='#metaid_759'> <dcterms:created> <rdf:Description> <dcterms:W3CDTF>2015-12-30T20:32:44Z</dcterms:W3CDTF> </rdf:Description> </dcterms:created> </rdf:Description> </rdf:RDF> </COPASI> </annotation> <listOfProducts> <speciesReference constant='true' metaid='metaid_758' species='Fum' stoichiometry='1'/> </listOfProducts> <kineticLaw> <math xmlns='http://www.w3.org/1998/Math/MathML'> <apply> <times/> <ci> default </ci> <apply> <ci> Function_for_vG_fumABC </ci> <ci> CrpcAMP </ci> <ci> KfumABC_Crp </ci> <ci> default </ci> 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</ci> <ci> kexpr </ci> <ci> mu </ci> <ci> vgapA_Cra_bound </ci> <ci> vgapA_Cra_unbound </ci> <ci> vgapA_Crp_bound </ci> <ci> vgapA_Crp_unbound </ci> </apply> </apply> </math> </kineticLaw> </reaction> <reaction fast='false' id='vG_glk' metaid='metaid_763' name='vG_glk' reversible='true'> <annotation> <COPASI xmlns='http://www.copasi.org/static/sbml'> <rdf:RDF xmlns:dcterms='http://purl.org/dc/terms/' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#'> <rdf:Description rdf:about='#metaid_763'> <dcterms:created> <rdf:Description> <dcterms:W3CDTF>2015-12-30T20:32:43Z</dcterms:W3CDTF> </rdf:Description> </dcterms:created> </rdf:Description> </rdf:RDF> </COPASI> </annotation> <listOfProducts> <speciesReference constant='true' metaid='metaid_762' species='Glk' stoichiometry='1'/> </listOfProducts> <kineticLaw> <math xmlns='http://www.w3.org/1998/Math/MathML'> <apply> <times/> <ci> default </ci> <apply> <ci> Function_for_vG_glk </ci> <ci> Cra </ci> <ci> Kglk_Cra </ci> <ci> default </ci> <ci> kexpr </ci> <ci> mu </ci> <ci> vglk_Cra_bound </ci> <ci> vglk_Cra_unbound </ci> </apply> </apply> </math> </kineticLaw> </reaction> <reaction fast='false' id='vG_gltA' metaid='metaid_765' name='vG_gltA' reversible='true'> <annotation> <COPASI xmlns='http://www.copasi.org/static/sbml'> <rdf:RDF xmlns:dcterms='http://purl.org/dc/terms/' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#'> <rdf:Description rdf:about='#metaid_765'> <dcterms:created> <rdf:Description> <dcterms:W3CDTF>2015-12-30T20:32:43Z</dcterms:W3CDTF> </rdf:Description> </dcterms:created> </rdf:Description> </rdf:RDF> </COPASI> </annotation> <listOfProducts> <speciesReference constant='true' metaid='metaid_764' species='CS' stoichiometry='1'/> </listOfProducts> <kineticLaw> <math xmlns='http://www.w3.org/1998/Math/MathML'> <apply> <times/> <ci> default </ci> <apply> <ci> Function_for_vG_gltA </ci> <ci> CrpcAMP </ci> <ci> KgltA_Crp </ci> <ci> default </ci> <ci> kexpr </ci> <ci> mu </ci> <ci> ngltA </ci> <ci> 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reversible='true'> <annotation> <COPASI xmlns='http://www.copasi.org/static/sbml'> <rdf:RDF xmlns:dcterms='http://purl.org/dc/terms/' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#'> <rdf:Description rdf:about='#metaid_771'> <dcterms:created> <rdf:Description> <dcterms:W3CDTF>2015-12-30T20:32:40Z</dcterms:W3CDTF> </rdf:Description> </dcterms:created> </rdf:Description> </rdf:RDF> </COPASI> </annotation> <listOfProducts> <speciesReference constant='true' metaid='metaid_770' species='MDH' stoichiometry='1'/> </listOfProducts> <kineticLaw> <math xmlns='http://www.w3.org/1998/Math/MathML'> <apply> <times/> <ci> default </ci> <apply> <ci> Function_for_vG_mdh </ci> <ci> CrpcAMP </ci> <ci> Kmdh_Crp </ci> <ci> default </ci> <ci> kexpr </ci> <ci> mu </ci> <ci> vmdh_Crp_bound </ci> <ci> vmdh_Crp_unbound </ci> </apply> </apply> </math> </kineticLaw> </reaction> <reaction fast='false' id='vG_pckA' metaid='metaid_773' name='vG_pckA' reversible='true'> <annotation> <COPASI xmlns='http://www.copasi.org/static/sbml'> <rdf:RDF xmlns:dcterms='http://purl.org/dc/terms/' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#'> <rdf:Description rdf:about='#metaid_773'> <dcterms:created> <rdf:Description> <dcterms:W3CDTF>2015-12-30T20:32:39Z</dcterms:W3CDTF> </rdf:Description> </dcterms:created> </rdf:Description> </rdf:RDF> </COPASI> </annotation> <listOfProducts> <speciesReference constant='true' metaid='metaid_772' species='Pck' stoichiometry='1'/> </listOfProducts> <kineticLaw> <math xmlns='http://www.w3.org/1998/Math/MathML'> <apply> <times/> <ci> default </ci> <apply> <ci> Function_for_vG_pckA </ci> <ci> Cra </ci> <ci> KpckA_Cra </ci> <ci> default </ci> <ci> kexpr </ci> <ci> mu </ci> <ci> vpckA_Cra_bound </ci> <ci> vpckA_Cra_unbound </ci> </apply> </apply> </math> </kineticLaw> </reaction> <reaction fast='false' id='vG_pdh' metaid='metaid_775' name='vG_pdh' reversible='true'> <annotation> <COPASI xmlns='http://www.copasi.org/static/sbml'> <rdf:RDF xmlns:dcterms='http://purl.org/dc/terms/' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#'> <rdf:Description rdf:about='#metaid_775'> <dcterms:created> <rdf:Description> <dcterms:W3CDTF>2015-12-30T20:32:39Z</dcterms:W3CDTF> </rdf:Description> </dcterms:created> </rdf:Description> </rdf:RDF> </COPASI> </annotation> <listOfProducts> <speciesReference constant='true' metaid='metaid_774' species='PDH' stoichiometry='1'/> </listOfProducts> <kineticLaw> <math xmlns='http://www.w3.org/1998/Math/MathML'> <apply> <times/> <ci> default </ci> <apply> <ci> Function_for_vG_pdh </ci> <ci> Kpdh_PdhR </ci> <ci> PdhR </ci> <ci> default </ci> <ci> kexpr </ci> <ci> mu </ci> <ci> vpdh_PdhR_bound </ci> <ci> vpdh_PdhR_unbound </ci> </apply> </apply> </math> </kineticLaw> </reaction> <reaction fast='false' id='vG_pfkA' metaid='metaid_777' name='vG_pfkA' reversible='true'> <annotation> <COPASI xmlns='http://www.copasi.org/static/sbml'> <rdf:RDF xmlns:dcterms='http://purl.org/dc/terms/' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#'> <rdf:Description rdf:about='#metaid_777'> <dcterms:created> <rdf:Description> <dcterms:W3CDTF>2015-12-30T20:32:38Z</dcterms:W3CDTF> </rdf:Description> </dcterms:created> </rdf:Description> </rdf:RDF> </COPASI> </annotation> <listOfProducts> <speciesReference constant='true' metaid='metaid_776' species='Pfk' stoichiometry='1'/> </listOfProducts> <kineticLaw> <math xmlns='http://www.w3.org/1998/Math/MathML'> <apply> <times/> <ci> default </ci> <apply> <ci> Function_for_vG_pfkA </ci> <ci> Cra </ci> <ci> KpfkA_Cra </ci> <ci> default </ci> <ci> kexpr </ci> <ci> mu </ci> <ci> vpfkA_Cra_bound </ci> <ci> vpfkA_Cra_unbound </ci> </apply> </apply> </math> </kineticLaw> </reaction> <reaction fast='false' id='vG_ppc' metaid='metaid_779' name='vG_ppc' reversible='true'> <annotation> <COPASI xmlns='http://www.copasi.org/static/sbml'> <rdf:RDF xmlns:dcterms='http://purl.org/dc/terms/' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#'> <rdf:Description rdf:about='#metaid_779'> <dcterms:created> <rdf:Description> <dcterms:W3CDTF>2015-12-30T20:27:01Z</dcterms:W3CDTF> </rdf:Description> </dcterms:created> </rdf:Description> </rdf:RDF> </COPASI> </annotation> <listOfProducts> <speciesReference constant='true' metaid='metaid_778' species='Ppc' stoichiometry='1'/> </listOfProducts> <kineticLaw> <math xmlns='http://www.w3.org/1998/Math/MathML'> <apply> <times/> <ci> default </ci> <apply> <ci> Function_for_vG_ppc </ci> <ci> SS_Ppc </ci> <ci> default </ci> <ci> kdegr </ci> <ci> mu </ci> </apply> </apply> </math> </kineticLaw> </reaction> <reaction fast='false' id='vG_ppsA' metaid='metaid_781' name='vG_ppsA' reversible='true'> <annotation> <COPASI xmlns='http://www.copasi.org/static/sbml'> <rdf:RDF xmlns:dcterms='http://purl.org/dc/terms/' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#'> <rdf:Description rdf:about='#metaid_781'> <dcterms:created> <rdf:Description> <dcterms:W3CDTF>2015-12-30T20:32:37Z</dcterms:W3CDTF> </rdf:Description> </dcterms:created> </rdf:Description> </rdf:RDF> </COPASI> </annotation> <listOfProducts> <speciesReference constant='true' metaid='metaid_780' species='Pps' stoichiometry='1'/> </listOfProducts> <kineticLaw> <math xmlns='http://www.w3.org/1998/Math/MathML'> <apply> <times/> <ci> default </ci> <apply> <ci> Function_for_vG_ppsA </ci> <ci> Cra </ci> <ci> KppsA_Cra </ci> <ci> default </ci> <ci> kexpr </ci> <ci> mu </ci> <ci> vppsA_Cra_bound </ci> <ci> vppsA_Cra_unbound </ci> </apply> </apply> </math> </kineticLaw> </reaction> <reaction fast='false' id='vG_pykF' metaid='metaid_783' name='vG_pykF' reversible='true'> <annotation> <COPASI xmlns='http://www.copasi.org/static/sbml'> <rdf:RDF xmlns:dcterms='http://purl.org/dc/terms/' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#'> <rdf:Description rdf:about='#metaid_783'> <dcterms:created> <rdf:Description> <dcterms:W3CDTF>2015-12-30T20:32:37Z</dcterms:W3CDTF> </rdf:Description> </dcterms:created> </rdf:Description> </rdf:RDF> </COPASI> </annotation> <listOfProducts> <speciesReference constant='true' metaid='metaid_782' species='Pyk' stoichiometry='1'/> </listOfProducts> <kineticLaw> <math xmlns='http://www.w3.org/1998/Math/MathML'> <apply> <times/> <ci> default </ci> <apply> <ci> Function_for_vG_pykF </ci> <ci> Cra </ci> <ci> KpykF_Cra </ci> <ci> default </ci> <ci> kexpr </ci> <ci> mu </ci> <ci> vpykF_Cra_bound </ci> <ci> vpykF_Cra_unbound </ci> </apply> </apply> </math> </kineticLaw> </reaction> <reaction fast='false' id='vG_sdhCDAB' metaid='metaid_785' name='vG_sdhCDAB' reversible='true'> <annotation> <COPASI xmlns='http://www.copasi.org/static/sbml'> <rdf:RDF xmlns:dcterms='http://purl.org/dc/terms/' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#'> <rdf:Description rdf:about='#metaid_785'> <dcterms:created> <rdf:Description> <dcterms:W3CDTF>2015-12-30T20:32:36Z</dcterms:W3CDTF> </rdf:Description> </dcterms:created> </rdf:Description> </rdf:RDF> </COPASI> </annotation> <listOfProducts> <speciesReference constant='true' metaid='metaid_784' species='SDH' stoichiometry='1'/> </listOfProducts> <kineticLaw> <math xmlns='http://www.w3.org/1998/Math/MathML'> <apply> <times/> <ci> default </ci> <apply> <ci> Function_for_vG_sdhCDAB </ci> <ci> CrpcAMP </ci> <ci> KsdhCDAB_Crp </ci> <ci> default </ci> <ci> kexpr </ci> <ci> mu </ci> <ci> nsdhCDAB </ci> <ci> vsdhCDAB_Crp_bound </ci> <ci> vsdhCDAB_Crp_unbound </ci> </apply> </apply> </math> </kineticLaw> </reaction> <reaction fast='false' id='vG_sucAB' metaid='metaid_787' name='vG_sucAB' reversible='true'> <annotation> <COPASI xmlns='http://www.copasi.org/static/sbml'> <rdf:RDF xmlns:dcterms='http://purl.org/dc/terms/' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#'> <rdf:Description rdf:about='#metaid_787'> <dcterms:created> <rdf:Description> <dcterms:W3CDTF>2015-12-30T20:32:27Z</dcterms:W3CDTF> </rdf:Description> </dcterms:created> </rdf:Description> </rdf:RDF> </COPASI> </annotation> <listOfProducts> <speciesReference constant='true' metaid='metaid_786' species='aKGDH' stoichiometry='1'/> </listOfProducts> <kineticLaw> <math xmlns='http://www.w3.org/1998/Math/MathML'> <apply> <times/> <ci> default </ci> <apply> <ci> Function_for_vG_sucAB </ci> <ci> CrpcAMP </ci> <ci> KsucAB_Crp </ci> <ci> default </ci> <ci> kexpr </ci> <ci> mu </ci> <ci> nsucAB </ci> <ci> vsucAB_Crp_bound </ci> <ci> vsucAB_Crp_unbound </ci> </apply> </apply> </math> </kineticLaw> </reaction> <reaction fast='false' id='vNonPTS' metaid='metaid_790' name='vNonPTS' reversible='true'> <annotation> <COPASI xmlns='http://www.copasi.org/static/sbml'> <rdf:RDF xmlns:dcterms='http://purl.org/dc/terms/' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#'> <rdf:Description rdf:about='#metaid_790'> <dcterms:created> <rdf:Description> <dcterms:W3CDTF>2015-12-30T20:32:35Z</dcterms:W3CDTF> </rdf:Description> </dcterms:created> </rdf:Description> </rdf:RDF> </COPASI> </annotation> <listOfProducts> <speciesReference constant='true' metaid='metaid_788' species='GLC' stoichiometry='1'/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference metaid='metaid_789' species='GLCex'/> </listOfModifiers> <kineticLaw> <math xmlns='http://www.w3.org/1998/Math/MathML'> <apply> <times/> <ci> default </ci> <apply> <ci> Function_for_vNonPTS </ci> <ci> EIIA </ci> <ci> GLCex </ci> <ci> KNonPTS_I </ci> <ci> KNonPTS_S </ci> <ci> default </ci> <ci> vNonPTS_max </ci> </apply> </apply> </math> </kineticLaw> </reaction> <reaction fast='false' id='vNonPTS_medium' metaid='metaid_793' name='vNonPTS_medium' reversible='true'> <annotation> <COPASI xmlns='http://www.copasi.org/static/sbml'> <rdf:RDF xmlns:dcterms='http://purl.org/dc/terms/' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#'> <rdf:Description rdf:about='#metaid_793'> <dcterms:created> <rdf:Description> <dcterms:W3CDTF>2015-12-30T20:32:34Z</dcterms:W3CDTF> </rdf:Description> </dcterms:created> </rdf:Description> </rdf:RDF> </COPASI> </annotation> <listOfReactants> <speciesReference constant='true' metaid='metaid_791' species='GLCex' stoichiometry='1'/> </listOfReactants> <listOfModifiers> <modifierSpeciesReference metaid='metaid_792' species='X'/> </listOfModifiers> <kineticLaw> <math xmlns='http://www.w3.org/1998/Math/MathML'> <apply> <times/> <ci> default </ci> <apply> <ci> Function_for_vNonPTS_medium </ci> <ci> EIIA </ci> <ci> GLCex </ci> <ci> KNonPTS_I </ci> <ci> KNonPTS_S </ci> <ci> X </ci> <ci> default </ci> <ci> rho </ci> <ci> vNonPTS_max </ci> </apply> </apply> </math> </kineticLaw> </reaction> <reaction fast='false' id='vPTS1' metaid='metaid_797' name='vPTS1' reversible='true'> <annotation> <COPASI xmlns='http://www.copasi.org/static/sbml'> <rdf:RDF xmlns:dcterms='http://purl.org/dc/terms/' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#'> <rdf:Description rdf:about='#metaid_797'> <dcterms:created> <rdf:Description> <dcterms:W3CDTF>2015-12-30T20:32:34Z</dcterms:W3CDTF> </rdf:Description> </dcterms:created> </rdf:Description> </rdf:RDF> </COPASI> </annotation> <listOfReactants> <speciesReference constant='true' metaid='metaid_794' species='PEP' stoichiometry='1'/> </listOfReactants> <listOfProducts> <speciesReference constant='true' metaid='metaid_795' species='EIIAP' stoichiometry='1'/> <speciesReference constant='true' metaid='metaid_796' species='PYR' stoichiometry='1'/> </listOfProducts> <kineticLaw> <math xmlns='http://www.w3.org/1998/Math/MathML'> <apply> <times/> <ci> default </ci> <apply> <ci> Function_for_vPTS1 </ci> <ci> EIIA </ci> <ci> EIIAP </ci> <ci> PEP </ci> <ci> PYR </ci> <ci> default </ci> <ci> kPTS1 </ci> <ci> kmPTS1 </ci> </apply> </apply> </math> </kineticLaw> </reaction> <reaction fast='false' id='vPTS4' metaid='metaid_801' name='vPTS4' reversible='true'> <annotation> <COPASI xmlns='http://www.copasi.org/static/sbml'> <rdf:RDF xmlns:dcterms='http://purl.org/dc/terms/' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#'> <rdf:Description rdf:about='#metaid_801'> <dcterms:created> <rdf:Description> <dcterms:W3CDTF>2015-12-30T20:32:33Z</dcterms:W3CDTF> </rdf:Description> </dcterms:created> </rdf:Description> </rdf:RDF> </COPASI> </annotation> <listOfReactants> <speciesReference constant='true' metaid='metaid_798' species='EIIAP' stoichiometry='1'/> </listOfReactants> <listOfProducts> <speciesReference constant='true' metaid='metaid_799' species='G6P' stoichiometry='1'/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference metaid='metaid_800' species='GLCex'/> </listOfModifiers> <kineticLaw> <math xmlns='http://www.w3.org/1998/Math/MathML'> <apply> <times/> <ci> default </ci> <apply> <ci> Function_for_vPTS4 </ci> <ci> EIIAP </ci> <ci> GLCex </ci> <ci> KPTS_EIIA </ci> <ci> KPTS_GLC </ci> <ci> default </ci> <ci> vPTS4_max </ci> </apply> </apply> </math> </kineticLaw> </reaction> <reaction fast='false' id='vPTS4_medium' metaid='metaid_805' name='vPTS4_medium' reversible='true'> <annotation> <COPASI xmlns='http://www.copasi.org/static/sbml'> <rdf:RDF xmlns:dcterms='http://purl.org/dc/terms/' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#'> <rdf:Description rdf:about='#metaid_805'> <dcterms:created> <rdf:Description> <dcterms:W3CDTF>2015-12-30T20:32:31Z</dcterms:W3CDTF> </rdf:Description> </dcterms:created> </rdf:Description> </rdf:RDF> </COPASI> </annotation> <listOfReactants> <speciesReference constant='true' metaid='metaid_802' species='GLCex' stoichiometry='1'/> </listOfReactants> <listOfModifiers> <modifierSpeciesReference metaid='metaid_803' species='X'/> <modifierSpeciesReference metaid='metaid_804' species='EIIAP'/> </listOfModifiers> <kineticLaw> <math xmlns='http://www.w3.org/1998/Math/MathML'> <apply> <times/> <ci> default </ci> <apply> <ci> Function_for_vPTS4_medium </ci> <ci> EIIAP </ci> <ci> GLCex </ci> <ci> KPTS_EIIA </ci> <ci> KPTS_GLC </ci> <ci> X </ci> <ci> default </ci> <ci> rho </ci> <ci> vPTS4_max </ci> </apply> </apply> </math> </kineticLaw> </reaction> <reaction fast='false' id='vgrowth' metaid='metaid_807' name='vgrowth' reversible='true'> <annotation> <COPASI xmlns='http://www.copasi.org/static/sbml'> <rdf:RDF xmlns:dcterms='http://purl.org/dc/terms/' xmlns:rdf='http://www.w3.org/1999/02/22-rdf-syntax-ns#'> <rdf:Description rdf:about='#metaid_807'> <dcterms:created> <rdf:Description> <dcterms:W3CDTF>2015-12-30T20:32:35Z</dcterms:W3CDTF> </rdf:Description> </dcterms:created> </rdf:Description> </rdf:RDF> </COPASI> </annotation> <listOfProducts> <speciesReference constant='true' metaid='metaid_806' species='X' stoichiometry='1'/> </listOfProducts> <kineticLaw> <math xmlns='http://www.w3.org/1998/Math/MathML'> <apply> <times/> <ci> default </ci> <apply> <ci> Function_for_vgrowth </ci> <ci> X </ci> <ci> default </ci> <ci> mu </ci> </apply> </apply> </math> </kineticLaw> </reaction> </listOfReactions> </model> </sbml>
Simulation of KIMOMODELID38.xml |
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Notes |
MATLAB version of the model is available at http://www.cadlive.jp/cadlive_main/Softwares/KineticModel/Ecolimetabolism.html.
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Software | MATLAB2007 or higher | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Export metadata |
RDF:
metadataModelEntryID38.rdf
XML: metadataModelEntryID38.xml Plain text: metadataModelEntryID38.txt |
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Cite Model EntryID 38
APA |
KiMoSys (https://kimosys.org). (2018, October 12). Model EntryID 38 (Escherichia coli). https://kimosys.org/repository/38/associated_models/38
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MLA |
KiMoSys (https://kimosys.org). "Model EntryID 38 (Escherichia coli)." 2024, kimosys.org/repository/38/associated_models/38.
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ISO-690 |
KiMoSys (https://kimosys.org). Model EntryID 38 (Escherichia coli). [online], [Accessed 12 October 2024]. Available from: https://kimosys.org/repository/38/associated_models/38
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BibTeX |
@misc{ KiMoSysModelEntryID38,
author = "{KiMoSys (https://kimosys.org)}",
title = "Model EntryID 38 (Escherichia coli)",
url = "https://kimosys.org/repository/38/associated_models/38",
note = "[Online; accessed 12-October-2024]"
}
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Related Model(s): AccessID 13 | AccessID 16 | AccessID 25 | AccessID 36 | AccessID 40 | AccessID 42 | AccessID 43 | AccessID 44 | AccessID 45
Entered by:
Administrator KiMoSysFirst name: Administrator
Affiliation: INESC-ID/IST
Homepage: http://kdbio.inesc-id.pt/kimosys
Interests: mathematical modeling, accessible data, use of data
Associated by: kimosys (at) kdbio.inesc-id.pt
Created: 2018-07-12 12:32:20 UTC
Updated: 2018-07-23 21:38:00 UTC
Version: 1
Status: (reviewed) 2018-07-12 12:39:06 UTC
Views: 535
Downloads: 178